RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 PKMP14618 531 aaKnown RBP3.33□□□□□ -1.88
XRN1-209ENST00000472625 CPEP16870 476 aa3.33□□□□□ -1.88
XRN1-209ENST00000472625 UGT1A6P19224 532 aa3.33□□□□□ -1.88
XRN1-209ENST00000472625 CD9P21926 228 aa3.33□□□□□ -1.88
XRN1-209ENST00000472625 BMP5P22003 454 aa3.33□□□□□ -1.88
XRN1-209ENST00000472625 UGT1A1P22309 533 aa3.33□□□□□ -1.88
XRN1-209ENST00000472625 UGT1A4P22310 534 aa3.33□□□□□ -1.88
XRN1-209ENST00000472625 MSNP26038 577 aaKnown RBP3.33□□□□□ -1.88
XRN1-209ENST00000472625 ECHS1P30084 290 aa3.33□□□□□ -1.88
XRN1-209ENST00000472625 PKLRP30613 574 aa3.33□□□□□ -1.88
XRN1-209ENST00000472625 PTPN7P35236 360 aa3.33□□□□□ -1.88
XRN1-209ENST00000472625 PTGS2P35354 604 aa3.33□□□□□ -1.88
XRN1-209ENST00000472625 HSD17B2P37059 387 aa3.33□□□□□ -1.88
XRN1-209ENST00000472625 PBX1P40424 430 aa3.33□□□□□ -1.88
XRN1-209ENST00000472625 ATP5OP48047 213 aa3.33□□□□□ -1.88
XRN1-209ENST00000472625 TTPAP49638 278 aa3.33□□□□□ -1.88
XRN1-209ENST00000472625 CHN2P52757 468 aa3.33□□□□□ -1.88
XRN1-209ENST00000472625 CLRN1P58418 232 aa3.33□□□□□ -1.88
XRN1-209ENST00000472625 TAS2R40P59535 323 aa3.33□□□□□ -1.88
XRN1-209ENST00000472625 WASHC5Q12768 1159 aa3.33□□□□□ -1.88
XRN1-209ENST00000472625 IHHQ14623 411 aa3.33□□□□□ -1.88
XRN1-209ENST00000472625 NOMO1Q15155 1222 aa3.33□□□□□ -1.88
XRN1-209ENST00000472625 SPA17Q15506 151 aa3.33□□□□□ -1.88
XRN1-209ENST00000472625 TAZQ16635 292 aa3.33□□□□□ -1.88
XRN1-209ENST00000472625 KRTAP21-3Q3LHN1 58 aa3.33□□□□□ -1.88
XRN1-209ENST00000472625 RNF187Q5TA31 235 aaPredicted RBP3.33□□□□□ -1.88
XRN1-209ENST00000472625 C1orf189Q5VU69 101 aa3.33□□□□□ -1.88
XRN1-209ENST00000472625 GARNL3Q5VVW2 1013 aa3.33□□□□□ -1.88
XRN1-209ENST00000472625 ARMC3Q5W041 872 aa3.33□□□□□ -1.88
XRN1-209ENST00000472625 KAZNQ674X7 775 aa3.33□□□□□ -1.88
XRN1-209ENST00000472625 NIPAL1Q6NVV3 410 aa3.33□□□□□ -1.88
XRN1-209ENST00000472625 XKRXQ6PP77 449 aa3.33□□□□□ -1.88
XRN1-209ENST00000472625 TMEM207Q6UWW9 146 aa3.33□□□□□ -1.88
XRN1-209ENST00000472625 MFSD7Q6UXD7 560 aa3.33□□□□□ -1.88
XRN1-209ENST00000472625 RANBP10Q6VN20 620 aa3.33□□□□□ -1.88
XRN1-209ENST00000472625 SEM1Q6ZVN7 128 aa3.33□□□□□ -1.88
XRN1-209ENST00000472625 BBS12Q6ZW61 710 aa3.33□□□□□ -1.88
XRN1-209ENST00000472625 NDUFAF7Q7L592 441 aa3.33□□□□□ -1.88
XRN1-209ENST00000472625 TAS2R42Q7RTR8 314 aa3.33□□□□□ -1.88
XRN1-209ENST00000472625 PPP1R32Q7Z5V6 425 aa3.33□□□□□ -1.88
XRN1-209ENST00000472625 CUZD1Q86UP6 607 aa3.33□□□□□ -1.88
XRN1-209ENST00000472625 KCNMB4Q86W47 210 aa3.33□□□□□ -1.88
XRN1-209ENST00000472625 LRRC6Q86X45 466 aa3.33□□□□□ -1.88
XRN1-209ENST00000472625 ZNF575Q86XF7 245 aa3.33□□□□□ -1.88
XRN1-209ENST00000472625 ADGRF3Q8IZF5 1079 aa3.33□□□□□ -1.88
XRN1-209ENST00000472625 SYCE1Q8N0S2 351 aa3.33□□□□□ -1.88
XRN1-209ENST00000472625 UBL4BQ8N7F7 174 aa3.33□□□□□ -1.88
XRN1-209ENST00000472625 MCOLN3Q8TDD5 553 aa3.33□□□□□ -1.88
XRN1-209ENST00000472625 GRHL3Q8TE85 626 aa3.33□□□□□ -1.88
XRN1-209ENST00000472625 STYXQ8WUJ0 223 aa3.33□□□□□ -1.88
XRN1-209ENST00000472625 NR4A3Q92570 626 aa3.33□□□□□ -1.88
XRN1-209ENST00000472625 RAB24Q969Q5 203 aa3.33□□□□□ -1.88
XRN1-209ENST00000472625 RERGQ96A58 199 aaPredicted RBP3.33□□□□□ -1.88
XRN1-209ENST00000472625 RAD51AP1Q96B01 352 aa3.33□□□□□ -1.88
XRN1-209ENST00000472625 C19orf60Q96EN9 201 aa3.33□□□□□ -1.88
XRN1-209ENST00000472625 OXNAD1Q96HP4 312 aaPredicted RBP3.33□□□□□ -1.88
XRN1-209ENST00000472625 THOC3Q96J01 351 aaKnown RBP3.33□□□□□ -1.88
XRN1-209ENST00000472625 SPATA13Q96N96 652 aa3.33□□□□□ -1.88
XRN1-209ENST00000472625 RUFY1Q96T51 708 aa3.33□□□□□ -1.88
XRN1-209ENST00000472625 EBNA1BP2Q99848 306 aaKnown RBP3.33□□□□□ -1.88
XRN1-209ENST00000472625 MRI1Q9BV20 369 aa3.33□□□□□ -1.88
XRN1-209ENST00000472625 FRMD8P1Q9BZ68 369 aaPredicted RBP3.33□□□□□ -1.88
XRN1-209ENST00000472625 FAM129AQ9BZQ8 928 aa3.33□□□□□ -1.88
XRN1-209ENST00000472625 PRDM13Q9H4Q3 707 aa3.33□□□□□ -1.88
XRN1-209ENST00000472625 UGT1A7Q9HAW7 530 aa3.33□□□□□ -1.88
XRN1-209ENST00000472625 UGT1A10Q9HAW8 530 aa3.33□□□□□ -1.88
XRN1-209ENST00000472625 UGT1A8Q9HAW9 530 aa3.33□□□□□ -1.88
XRN1-209ENST00000472625 ARNT2Q9HBZ2 717 aa3.33□□□□□ -1.88
XRN1-209ENST00000472625 FAM114A2Q9NRY5 505 aa3.33□□□□□ -1.88
XRN1-209ENST00000472625 CUTCQ9NTM9 273 aa3.33□□□□□ -1.88
XRN1-209ENST00000472625 ABHD10Q9NUJ1 306 aa3.33□□□□□ -1.88
XRN1-209ENST00000472625 NLE1Q9NVX2 485 aaPredicted RBP3.33□□□□□ -1.88
XRN1-209ENST00000472625 SYBUQ9NX95 663 aa3.33□□□□□ -1.88
XRN1-209ENST00000472625 EURLQ9NYK6 297 aa3.33□□□□□ -1.88
XRN1-209ENST00000472625 SMARCAL1Q9NZC9 954 aa3.33□□□□□ -1.88
XRN1-209ENST00000472625 SPATA7Q9P0W8 599 aa3.33□□□□□ -1.88
XRN1-209ENST00000472625 ANAPC5Q9UJX4 755 aa3.33□□□□□ -1.88
XRN1-209ENST00000472625 SLC39A10Q9ULF5 831 aa3.33□□□□□ -1.88
XRN1-209ENST00000472625 RIMKLBQ9ULI2 386 aa3.33□□□□□ -1.88
XRN1-209ENST00000472625 NENFQ9UMX5 172 aa3.33□□□□□ -1.88
XRN1-209ENST00000472625 ICKQ9UPZ9 632 aa3.33□□□□□ -1.88
XRN1-209ENST00000472625 OSGIN2Q9Y236 505 aa3.33□□□□□ -1.88
XRN1-209ENST00000472625 KLK4Q9Y5K2 254 aa3.33□□□□□ -1.88
XRN1-209ENST00000472625 UTP20O75691 2785 aaKnown RBP3.33□□□□□ -1.88
XRN1-209ENST00000472625 ZNF106Q9H2Y7 1883 aaKnown RBP3.33□□□□□ -1.88
XRN1-209ENST00000472625 ICE1Q9Y2F5 2266 aa3.32□□□□□ -1.88
XRN1-209ENST00000472625 TRGV8A0A0C4DH27 118 aa3.32□□□□□ -1.88
XRN1-209ENST00000472625 OR5H15A6NDH6 313 aa3.32□□□□□ -1.88
XRN1-209ENST00000472625 MIF4GDA9UHW6 222 aaKnown RBP3.32□□□□□ -1.88
XRN1-209ENST00000472625 E7EVH7 732 aa3.32□□□□□ -1.88
XRN1-209ENST00000472625 H3BMH7 237 aa3.32□□□□□ -1.88
XRN1-209ENST00000472625 SOCS6O14544 535 aa3.32□□□□□ -1.88
XRN1-209ENST00000472625 KCNN4O15554 427 aa3.32□□□□□ -1.88
XRN1-209ENST00000472625 ZG16O60844 167 aa3.32□□□□□ -1.88
XRN1-209ENST00000472625 SUN1O94901 812 aa3.32□□□□□ -1.88
XRN1-209ENST00000472625 BMP10O95393 424 aa3.32□□□□□ -1.88
XRN1-209ENST00000472625 LCA5LO95447 670 aa3.32□□□□□ -1.88
XRN1-209ENST00000472625 UMODP07911 640 aa3.32□□□□□ -1.88
XRN1-209ENST00000472625 RNF224P0DH78 156 aa3.32□□□□□ -1.88
XRN1-209ENST00000472625 CBSLP0DN79 551 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms