RNA–Protein interactions for RNA: ENST00000472479.1

UBE2F-220, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 1,458 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-220ENST00000472479 ADAM29Q9UKF5 820 aa9.98□□□□□ -0.81
UBE2F-220ENST00000472479 PADI1Q9ULC6 663 aa9.98□□□□□ -0.81
UBE2F-220ENST00000472479 PCDHGA8Q9Y5G5 932 aa9.98□□□□□ -0.81
UBE2F-220ENST00000472479 TRABD2BA6NFA1 517 aa9.98□□□□□ -0.81
UBE2F-220ENST00000472479 SRRM3A6NNA2 597 aaPredicted RBP9.98□□□□□ -0.81
UBE2F-220ENST00000472479 H0YIG0 161 aa9.98□□□□□ -0.81
UBE2F-220ENST00000472479 MEN1O00255 615 aa9.98□□□□□ -0.81
UBE2F-220ENST00000472479 CHST10O43529 356 aa9.98□□□□□ -0.81
UBE2F-220ENST00000472479 AKAP10O43572 662 aa9.98□□□□□ -0.81
UBE2F-220ENST00000472479 EEDO75530 441 aaKnown RBP9.98□□□□□ -0.81
UBE2F-220ENST00000472479 LRATO95237 230 aa9.98□□□□□ -0.81
UBE2F-220ENST00000472479 PRPS2P11908 318 aa9.98□□□□□ -0.81
UBE2F-220ENST00000472479 RNH1P13489 461 aaKnown RBP9.98□□□□□ -0.81
UBE2F-220ENST00000472479 ZNF28P17035 718 aa9.98□□□□□ -0.81
UBE2F-220ENST00000472479 SPINK2P20155 84 aa9.98□□□□□ -0.81
UBE2F-220ENST00000472479 SLC5A2P31639 672 aa9.98□□□□□ -0.81
UBE2F-220ENST00000472479 BSGP35613 385 aa9.98□□□□□ -0.81
UBE2F-220ENST00000472479 BUD31P41223 144 aaPredicted RBP9.98□□□□□ -0.81
UBE2F-220ENST00000472479 ARFIP1P53367 373 aa9.98□□□□□ -0.81
UBE2F-220ENST00000472479 NME5P56597 212 aa9.98□□□□□ -0.81
UBE2F-220ENST00000472479 TAS2R50P59544 299 aa9.98□□□□□ -0.81
UBE2F-220ENST00000472479 MAT1AQ00266 395 aaKnown RBP9.98□□□□□ -0.81
UBE2F-220ENST00000472479 C2orf80Q0P641 193 aa9.98□□□□□ -0.81
UBE2F-220ENST00000472479 TBL3Q12788 808 aaKnown RBP9.98□□□□□ -0.81
UBE2F-220ENST00000472479 NKAIN1Q4KMZ8 207 aa9.98□□□□□ -0.81
UBE2F-220ENST00000472479 RHBDD2Q6NTF9 364 aa9.98□□□□□ -0.81
UBE2F-220ENST00000472479 LARP4Q71RC2 724 aaKnown RBP eCLIP9.98□□□□□ -0.81
UBE2F-220ENST00000472479 PRSS41Q7RTY9 318 aa9.98□□□□□ -0.81
UBE2F-220ENST00000472479 MAVSQ7Z434 540 aa9.98□□□□□ -0.81
UBE2F-220ENST00000472479 UBE3DQ7Z6J8 389 aa9.98□□□□□ -0.81
UBE2F-220ENST00000472479 GPR180Q86V85 440 aa9.98□□□□□ -0.81
UBE2F-220ENST00000472479 ANKS4BQ8N8V4 417 aa9.98□□□□□ -0.81
UBE2F-220ENST00000472479 OR51Q1Q8NH59 317 aa9.98□□□□□ -0.81
UBE2F-220ENST00000472479 PROKR1Q8TCW9 393 aa9.98□□□□□ -0.81
UBE2F-220ENST00000472479 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.98□□□□□ -0.81
UBE2F-220ENST00000472479 GFM2Q969S9 779 aaKnown RBP9.98□□□□□ -0.81
UBE2F-220ENST00000472479 PEX11GQ96HA9 241 aa9.98□□□□□ -0.81
UBE2F-220ENST00000472479 MARK4Q96L34 752 aa9.98□□□□□ -0.81
UBE2F-220ENST00000472479 TSSK3Q96PN8 268 aa9.98□□□□□ -0.81
UBE2F-220ENST00000472479 NPLQ9BXD5 320 aaPredicted RBP9.98□□□□□ -0.81
UBE2F-220ENST00000472479 DPY30Q9C005 99 aa9.98□□□□□ -0.81
UBE2F-220ENST00000472479 DDX31Q9H8H2 851 aaKnown RBP9.98□□□□□ -0.81
UBE2F-220ENST00000472479 MIEF1Q9NQG6 463 aa9.98□□□□□ -0.81
UBE2F-220ENST00000472479 THSD1Q9NS62 852 aa9.98□□□□□ -0.81
UBE2F-220ENST00000472479 HEY2Q9UBP5 337 aa9.98□□□□□ -0.81
UBE2F-220ENST00000472479 MCM8Q9UJA3 840 aa9.98□□□□□ -0.81
UBE2F-220ENST00000472479 MRPS33Q9Y291 106 aaKnown RBP9.98□□□□□ -0.81
UBE2F-220ENST00000472479 CLDN4O14493 209 aa9.97□□□□□ -0.81
UBE2F-220ENST00000472479 ZNF195O14628 629 aa9.97□□□□□ -0.81
UBE2F-220ENST00000472479 FOXS1O43638 330 aa9.97□□□□□ -0.81
UBE2F-220ENST00000472479 CCDC22O60826 627 aa9.97□□□□□ -0.81
UBE2F-220ENST00000472479 SHOX2O60902 331 aaPredicted RBP9.97□□□□□ -0.81
UBE2F-220ENST00000472479 B4GALT2O60909 372 aa9.97□□□□□ -0.81
UBE2F-220ENST00000472479 TBX6O95947 436 aaPredicted RBP9.97□□□□□ -0.81
UBE2F-220ENST00000472479 FAM107AO95990 144 aa9.97□□□□□ -0.81
UBE2F-220ENST00000472479 SMIM10L1P0DMW3 83 aa9.97□□□□□ -0.81
UBE2F-220ENST00000472479 BCKDHAP12694 445 aa9.97□□□□□ -0.81
UBE2F-220ENST00000472479 IDO1P14902 403 aa9.97□□□□□ -0.81
UBE2F-220ENST00000472479 ALOX15P16050 662 aaPredicted RBP9.97□□□□□ -0.81
UBE2F-220ENST00000472479 DDX5P17844 614 aaKnown RBP9.97□□□□□ -0.81
UBE2F-220ENST00000472479 PRPH2P23942 346 aa9.97□□□□□ -0.81
UBE2F-220ENST00000472479 HPCAL1P37235 193 aa9.97□□□□□ -0.81
UBE2F-220ENST00000472479 ASMTP46597 345 aa9.97□□□□□ -0.81
UBE2F-220ENST00000472479 ACTN3Q08043 901 aaPredicted RBP9.97□□□□□ -0.81
UBE2F-220ENST00000472479 RUNX2Q13950 521 aa9.97□□□□□ -0.81
UBE2F-220ENST00000472479 HEPACAMQ14CZ8 416 aa9.97□□□□□ -0.81
UBE2F-220ENST00000472479 SMU1Q2TAY7 513 aa9.97□□□□□ -0.81
UBE2F-220ENST00000472479 MINDY4Q4G0A6 757 aa9.97□□□□□ -0.81
UBE2F-220ENST00000472479 CGB2Q6NT52 195 aa9.97□□□□□ -0.81
UBE2F-220ENST00000472479 ZNF793Q6ZN11 406 aa9.97□□□□□ -0.81
UBE2F-220ENST00000472479 PRSS58Q8IYP2 241 aa9.97□□□□□ -0.81
UBE2F-220ENST00000472479 ZCCHC7Q8N3Z6 543 aaKnown RBP9.97□□□□□ -0.81
UBE2F-220ENST00000472479 DTWD1Q8N5C7 304 aa9.97□□□□□ -0.81
UBE2F-220ENST00000472479 IL22RA1Q8N6P7 574 aa9.97□□□□□ -0.81
UBE2F-220ENST00000472479 AMER3Q8N944 861 aa9.97□□□□□ -0.81
UBE2F-220ENST00000472479 CCDC197Q8NCU1 140 aa9.97□□□□□ -0.81
UBE2F-220ENST00000472479 OR5T3Q8NGG3 340 aa9.97□□□□□ -0.81
UBE2F-220ENST00000472479 CLHC1Q8NHS4 586 aa9.97□□□□□ -0.81
UBE2F-220ENST00000472479 C16orf78Q8WTQ4 265 aa9.97□□□□□ -0.81
UBE2F-220ENST00000472479 PMEPA1Q969W9 287 aa9.97□□□□□ -0.81
UBE2F-220ENST00000472479 MARVELD3Q96A59 401 aa9.97□□□□□ -0.81
UBE2F-220ENST00000472479 NXPE2Q96DL1 559 aa9.97□□□□□ -0.81
UBE2F-220ENST00000472479 SMIM10Q96HG1 83 aa9.97□□□□□ -0.81
UBE2F-220ENST00000472479 SLC46A1Q96NT5 459 aa9.97□□□□□ -0.81
UBE2F-220ENST00000472479 PRPF18Q99633 342 aaKnown RBP9.97□□□□□ -0.81
UBE2F-220ENST00000472479 SCNM1Q9BWG6 230 aa9.97□□□□□ -0.81
UBE2F-220ENST00000472479 RBCK1Q9BYM8 510 aa9.97□□□□□ -0.81
UBE2F-220ENST00000472479 NRSN2Q9GZP1 204 aa9.97□□□□□ -0.81
UBE2F-220ENST00000472479 CLK4Q9HAZ1 481 aaKnown RBP9.97□□□□□ -0.81
UBE2F-220ENST00000472479 MS4A12Q9NXJ0 267 aa9.97□□□□□ -0.81
UBE2F-220ENST00000472479 ZNF282Q9UDV7 671 aaPredicted RBP9.97□□□□□ -0.81
UBE2F-220ENST00000472479 BAIAP2L1Q9UHR4 511 aa9.97□□□□□ -0.81
UBE2F-220ENST00000472479 KLK13Q9UKR3 277 aa9.97□□□□□ -0.81
UBE2F-220ENST00000472479 PSME2Q9UL46 239 aa9.97□□□□□ -0.81
UBE2F-220ENST00000472479 DLGAP4Q9Y2H0 992 aa9.97□□□□□ -0.81
UBE2F-220ENST00000472479 ARL2BPQ9Y2Y0 163 aa9.97□□□□□ -0.81
UBE2F-220ENST00000472479 CCL27Q9Y4X3 112 aa9.97□□□□□ -0.81
UBE2F-220ENST00000472479 PCDHGA3Q9Y5H0 932 aa9.97□□□□□ -0.81
UBE2F-220ENST00000472479 TEX51A0A1B0GUA7 166 aa9.96□□□□□ -0.82
UBE2F-220ENST00000472479 C9orf172C9J069 976 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms