RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 MAPKAPK3Q16644 382 aa9.27□□□□□ -0.93
CCM2-204ENST00000470837 PRTGQ2VWP7 1150 aa9.27□□□□□ -0.93
CCM2-204ENST00000470837 COQ5Q5HYK3 327 aa9.27□□□□□ -0.93
CCM2-204ENST00000470837 C6orf10Q5SRN2 563 aa9.27□□□□□ -0.93
CCM2-204ENST00000470837 ARHGAP22Q7Z5H3 698 aa9.27□□□□□ -0.93
CCM2-204ENST00000470837 UBE3DQ7Z6J8 389 aa9.27□□□□□ -0.93
CCM2-204ENST00000470837 BPHLQ86WA6 291 aaPredicted RBP9.27□□□□□ -0.93
CCM2-204ENST00000470837 KRTCAP2Q8N6L1 136 aa9.27□□□□□ -0.93
CCM2-204ENST00000470837 RCBTB1Q8NDN9 531 aa9.27□□□□□ -0.93
CCM2-204ENST00000470837 DNAJB8Q8NHS0 232 aa9.27□□□□□ -0.93
CCM2-204ENST00000470837 ADAMTS18Q8TE60 1221 aa9.27□□□□□ -0.93
CCM2-204ENST00000470837 ROPN1LQ96C74 230 aa9.27□□□□□ -0.93
CCM2-204ENST00000470837 RCN3Q96D15 328 aa9.27□□□□□ -0.93
CCM2-204ENST00000470837 C11orf24Q96F05 449 aaPredicted RBP9.27□□□□□ -0.93
CCM2-204ENST00000470837 TEFMQ96QE5 360 aaKnown RBP9.27□□□□□ -0.93
CCM2-204ENST00000470837 CMKLR1Q99788 373 aa9.27□□□□□ -0.93
CCM2-204ENST00000470837 NPLQ9BXD5 320 aaPredicted RBP9.27□□□□□ -0.93
CCM2-204ENST00000470837 CLMPQ9H6B4 373 aa9.27□□□□□ -0.93
CCM2-204ENST00000470837 CLK4Q9HAZ1 481 aaKnown RBP9.27□□□□□ -0.93
CCM2-204ENST00000470837 PARD6AQ9NPB6 346 aa9.27□□□□□ -0.93
CCM2-204ENST00000470837 PRDM7Q9NQW5 492 aa9.27□□□□□ -0.93
CCM2-204ENST00000470837 FBXW2Q9UKT8 454 aa9.27□□□□□ -0.93
CCM2-204ENST00000470837 SRPK3Q9UPE1 567 aa9.27□□□□□ -0.93
CCM2-204ENST00000470837 NAALAD2Q9Y3Q0 740 aa9.27□□□□□ -0.93
CCM2-204ENST00000470837 PCDHGA1Q9Y5H4 931 aa9.27□□□□□ -0.93
CCM2-204ENST00000470837 CACNA1HO95180 2353 aa9.26□□□□□ -0.93
CCM2-204ENST00000470837 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.26□□□□□ -0.93
CCM2-204ENST00000470837 C1orf226A1L170 272 aa9.26□□□□□ -0.93
CCM2-204ENST00000470837 C9JVG2 144 aa9.26□□□□□ -0.93
CCM2-204ENST00000470837 ANKRD28O15084 1053 aa9.26□□□□□ -0.93
CCM2-204ENST00000470837 TMPRSS11DO60235 418 aa9.26□□□□□ -0.93
CCM2-204ENST00000470837 GALR3O60755 368 aaPredicted RBP9.26□□□□□ -0.93
CCM2-204ENST00000470837 SCELO95171 688 aa9.26□□□□□ -0.93
CCM2-204ENST00000470837 KCNH1O95259 989 aa9.26□□□□□ -0.93
CCM2-204ENST00000470837 TBX6O95947 436 aaPredicted RBP9.26□□□□□ -0.93
CCM2-204ENST00000470837 NPPAP01160 153 aa9.26□□□□□ -0.93
CCM2-204ENST00000470837 HBQ1P09105 142 aa9.26□□□□□ -0.93
CCM2-204ENST00000470837 NR2F6P10588 404 aa9.26□□□□□ -0.93
CCM2-204ENST00000470837 FOLR1P15328 257 aa9.26□□□□□ -0.93
CCM2-204ENST00000470837 IL1RNP18510 177 aa9.26□□□□□ -0.93
CCM2-204ENST00000470837 NTSP30990 170 aa9.26□□□□□ -0.93
CCM2-204ENST00000470837 C21orf58P58505 322 aa9.26□□□□□ -0.93
CCM2-204ENST00000470837 TRIP6Q15654 476 aaKnown RBP9.26□□□□□ -0.93
CCM2-204ENST00000470837 SPANXN4Q5MJ08 99 aa9.26□□□□□ -0.93
CCM2-204ENST00000470837 NDUFAF5Q5TEU4 345 aa9.26□□□□□ -0.93
CCM2-204ENST00000470837 REP15Q6BDI9 236 aa9.26□□□□□ -0.93
CCM2-204ENST00000470837 FAM71E1Q6IPT2 247 aa9.26□□□□□ -0.93
CCM2-204ENST00000470837 PRMT9Q6P2P2 845 aa9.26□□□□□ -0.93
CCM2-204ENST00000470837 ZNF574Q6ZN55 896 aaPredicted RBP9.26□□□□□ -0.93
CCM2-204ENST00000470837 MSANTD1Q6ZTZ1 278 aa9.26□□□□□ -0.93
CCM2-204ENST00000470837 PPP1R3BQ86XI6 285 aa9.26□□□□□ -0.93
CCM2-204ENST00000470837 TICAM1Q8IUC6 712 aa9.26□□□□□ -0.93
CCM2-204ENST00000470837 TMEM126BQ8IUX1 230 aa9.26□□□□□ -0.93
CCM2-204ENST00000470837 FUNDC1Q8IVP5 155 aa9.26□□□□□ -0.93
CCM2-204ENST00000470837 SAMD14Q8IZD0 417 aaPredicted RBP9.26□□□□□ -0.93
CCM2-204ENST00000470837 DSELQ8IZU8 1212 aa9.26□□□□□ -0.93
CCM2-204ENST00000470837 VPS33AQ96AX1 596 aa9.26□□□□□ -0.93
CCM2-204ENST00000470837 MVB12AQ96EY5 273 aa9.26□□□□□ -0.93
CCM2-204ENST00000470837 MMABQ96EY8 250 aaPredicted RBP9.26□□□□□ -0.93
CCM2-204ENST00000470837 ITCHQ96J02 903 aa9.26□□□□□ -0.93
CCM2-204ENST00000470837 EGLN2Q96KS0 407 aa9.26□□□□□ -0.93
CCM2-204ENST00000470837 TEX37Q96LM6 180 aa9.26□□□□□ -0.93
CCM2-204ENST00000470837 RAB3IPQ96QF0 476 aaPredicted RBP9.26□□□□□ -0.93
CCM2-204ENST00000470837 OR6C1Q96RD1 312 aa9.26□□□□□ -0.93
CCM2-204ENST00000470837 NPAS2Q99743 824 aa9.26□□□□□ -0.93
CCM2-204ENST00000470837 BTBD10Q9BSF8 475 aa9.26□□□□□ -0.93
CCM2-204ENST00000470837 DUSP26Q9BV47 211 aa9.26□□□□□ -0.93
CCM2-204ENST00000470837 YIPF2Q9BWQ6 316 aa9.26□□□□□ -0.93
CCM2-204ENST00000470837 BHLHE41Q9C0J9 482 aaPredicted RBP9.26□□□□□ -0.93
CCM2-204ENST00000470837 SPRTNQ9H040 489 aaPredicted RBP9.26□□□□□ -0.93
CCM2-204ENST00000470837 C1orf21Q9H246 121 aa9.26□□□□□ -0.93
CCM2-204ENST00000470837 LYRM4Q9HD34 91 aa9.26□□□□□ -0.93
CCM2-204ENST00000470837 CUTCQ9NTM9 273 aa9.26□□□□□ -0.93
CCM2-204ENST00000470837 FAM120CQ9NX05 1096 aaKnown RBP9.26□□□□□ -0.93
CCM2-204ENST00000470837 ATP6V1HQ9UI12 483 aa9.26□□□□□ -0.93
CCM2-204ENST00000470837 ENTPD4Q9Y227 616 aa9.26□□□□□ -0.93
CCM2-204ENST00000470837 MRPS33Q9Y291 106 aaKnown RBP9.26□□□□□ -0.93
CCM2-204ENST00000470837 ZNF318Q5VUA4 2279 aa9.26□□□□□ -0.93
CCM2-204ENST00000470837 PI4KAP42356 2102 aa9.26□□□□□ -0.93
CCM2-204ENST00000470837 GPR179Q6PRD1 2367 aa9.26□□□□□ -0.93
CCM2-204ENST00000470837 CABIN1Q9Y6J0 2220 aa9.25□□□□□ -0.93
CCM2-204ENST00000470837 A0A0A6YYC8 382 aaPredicted RBP9.25□□□□□ -0.93
CCM2-204ENST00000470837 C15orf38-AP3S2A0A0A6YYH1 394 aa9.25□□□□□ -0.93
CCM2-204ENST00000470837 FITM1A5D6W6 292 aa9.25□□□□□ -0.93
CCM2-204ENST00000470837 ZNF860A6NHJ4 632 aa9.25□□□□□ -0.93
CCM2-204ENST00000470837 EFCAB7A8K855 629 aa9.25□□□□□ -0.93
CCM2-204ENST00000470837 GABRR3A8MPY1 467 aa9.25□□□□□ -0.93
CCM2-204ENST00000470837 PROB1E7EW31 1015 aa9.25□□□□□ -0.93
CCM2-204ENST00000470837 H0YIG0 161 aa9.25□□□□□ -0.93
CCM2-204ENST00000470837 I3L1I5 382 aaPredicted RBP9.25□□□□□ -0.93
CCM2-204ENST00000470837 SGK494L7N484 410 aa9.25□□□□□ -0.93
CCM2-204ENST00000470837 AGRPO00253 132 aa9.25□□□□□ -0.93
CCM2-204ENST00000470837 CLDN4O14493 209 aa9.25□□□□□ -0.93
CCM2-204ENST00000470837 POLR1CO15160 346 aaPredicted RBP9.25□□□□□ -0.93
CCM2-204ENST00000470837 GDF9O60383 454 aa9.25□□□□□ -0.93
CCM2-204ENST00000470837 CBFA2T3O75081 653 aa9.25□□□□□ -0.93
CCM2-204ENST00000470837 NSA2O95478 260 aaKnown RBP9.25□□□□□ -0.93
CCM2-204ENST00000470837 FURINP09958 794 aa9.25□□□□□ -0.93
CCM2-204ENST00000470837 T-ENOLP0DO92 83 aa9.25□□□□□ -0.93
CCM2-204ENST00000470837 CAPN3P20807 821 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms