RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 NUDT6P53370 316 aa13.06□□□□□ -0.32
BRCA1-209ENST00000470026 C2orf80Q0P641 193 aa13.06□□□□□ -0.32
BRCA1-209ENST00000470026 ARMCX4Q5H9R4 360 aa13.06□□□□□ -0.32
BRCA1-209ENST00000470026 COLEC12Q5KU26 742 aa13.06□□□□□ -0.32
BRCA1-209ENST00000470026 STEAP3Q658P3 488 aa13.06□□□□□ -0.32
BRCA1-209ENST00000470026 RNF130Q86XS8 419 aa13.06□□□□□ -0.32
BRCA1-209ENST00000470026 STX19Q8N4C7 294 aa13.06□□□□□ -0.32
BRCA1-209ENST00000470026 ZNF513Q8N8E2 541 aaPredicted RBP13.06□□□□□ -0.32
BRCA1-209ENST00000470026 AP2M1Q96CW1 435 aa13.06□□□□□ -0.32
BRCA1-209ENST00000470026 CORO1BQ9BR76 489 aa13.06□□□□□ -0.32
BRCA1-209ENST00000470026 WRAP53Q9BUR4 548 aaKnown RBP13.06□□□□□ -0.32
BRCA1-209ENST00000470026 GPBP1L1Q9HC44 474 aaPredicted RBP13.06□□□□□ -0.32
BRCA1-209ENST00000470026 POLE4Q9NR33 117 aa13.06□□□□□ -0.32
BRCA1-209ENST00000470026 ASAH2Q9NR71 780 aa13.06□□□□□ -0.32
BRCA1-209ENST00000470026 SPHK2Q9NRA0 654 aa13.06□□□□□ -0.32
BRCA1-209ENST00000470026 IL36AQ9UHA7 158 aa13.06□□□□□ -0.32
BRCA1-209ENST00000470026 ACSL6Q9UKU0 697 aa13.06□□□□□ -0.32
BRCA1-209ENST00000470026 KIF26AQ9ULI4 1882 aaPredicted RBP13.06□□□□□ -0.32
BRCA1-209ENST00000470026 IFT52Q9Y366 437 aa13.06□□□□□ -0.32
BRCA1-209ENST00000470026 DYRK1BQ9Y463 629 aa13.06□□□□□ -0.32
BRCA1-209ENST00000470026 MTCL1Q9Y4B5 1905 aaKnown RBP13.05□□□□□ -0.32
BRCA1-209ENST00000470026 EFCAB10A6NFE3 127 aa13.05□□□□□ -0.32
BRCA1-209ENST00000470026 MPZL2O60487 215 aa13.05□□□□□ -0.32
BRCA1-209ENST00000470026 MOSPD3O75425 235 aa13.05□□□□□ -0.32
BRCA1-209ENST00000470026 CCNB2O95067 398 aa13.05□□□□□ -0.32
BRCA1-209ENST00000470026 SNX4O95219 450 aa13.05□□□□□ -0.32
BRCA1-209ENST00000470026 KRT75O95678 551 aa13.05□□□□□ -0.32
BRCA1-209ENST00000470026 SOD1P00441 154 aa13.05□□□□□ -0.32
BRCA1-209ENST00000470026 RB1P06400 928 aa13.05□□□□□ -0.32
BRCA1-209ENST00000470026 PIPP12273 146 aaPredicted RBP13.05□□□□□ -0.32
BRCA1-209ENST00000470026 SYN1P17600 705 aa13.05□□□□□ -0.32
BRCA1-209ENST00000470026 CHMP24386 653 aa13.05□□□□□ -0.32
BRCA1-209ENST00000470026 PPM1AP35813 382 aa13.05□□□□□ -0.32
BRCA1-209ENST00000470026 EPHA5P54756 1037 aa13.05□□□□□ -0.32
BRCA1-209ENST00000470026 UGT2B15P54855 530 aa13.05□□□□□ -0.32
BRCA1-209ENST00000470026 PTGES3Q15185 160 aaKnown RBP13.05□□□□□ -0.32
BRCA1-209ENST00000470026 TPRG1LQ5T0D9 272 aa13.05□□□□□ -0.32
BRCA1-209ENST00000470026 NXPE4Q6UWF7 544 aa13.05□□□□□ -0.32
BRCA1-209ENST00000470026 B3GNT7Q8NFL0 401 aa13.05□□□□□ -0.32
BRCA1-209ENST00000470026 OR9A1PQ8NGU1 263 aa13.05□□□□□ -0.32
BRCA1-209ENST00000470026 PDXPQ96GD0 296 aa13.05□□□□□ -0.32
BRCA1-209ENST00000470026 ABHD8Q96I13 439 aa13.05□□□□□ -0.32
BRCA1-209ENST00000470026 TXNDC15Q96J42 360 aa13.05□□□□□ -0.32
BRCA1-209ENST00000470026 COQ10AQ96MF6 247 aa13.05□□□□□ -0.32
BRCA1-209ENST00000470026 FAM129BQ96TA1 746 aa13.05□□□□□ -0.32
BRCA1-209ENST00000470026 OR51E2Q9H255 320 aa13.05□□□□□ -0.32
BRCA1-209ENST00000470026 SPNS1Q9H2V7 528 aa13.05□□□□□ -0.32
BRCA1-209ENST00000470026 ZNF556Q9HAH1 456 aa13.05□□□□□ -0.32
BRCA1-209ENST00000470026 FZD3Q9NPG1 666 aa13.05□□□□□ -0.32
BRCA1-209ENST00000470026 NDOR1Q9UHB4 597 aa13.05□□□□□ -0.32
BRCA1-209ENST00000470026 SLC6A14Q9UN76 642 aa13.05□□□□□ -0.32
BRCA1-209ENST00000470026 ANGPT4Q9Y264 503 aa13.05□□□□□ -0.32
BRCA1-209ENST00000470026 FAM32AQ9Y421 112 aaKnown RBP13.05□□□□□ -0.32
BRCA1-209ENST00000470026 ABHD14A-ACY1A0A1B0GW23 586 aa13.04□□□□□ -0.32
BRCA1-209ENST00000470026 TRIM43BA6NCK2 446 aa13.04□□□□□ -0.32
BRCA1-209ENST00000470026 KDM1AO60341 852 aa13.04□□□□□ -0.32
BRCA1-209ENST00000470026 PTTG1O95997 202 aa13.04□□□□□ -0.32
BRCA1-209ENST00000470026 TGFB1P01137 390 aa13.04□□□□□ -0.32
BRCA1-209ENST00000470026 ADRA2AP08913 450 aa13.04□□□□□ -0.32
BRCA1-209ENST00000470026 DBTP11182 482 aaKnown RBP13.04□□□□□ -0.32
BRCA1-209ENST00000470026 FUT4P22083 530 aa13.04□□□□□ -0.32
BRCA1-209ENST00000470026 DDX6P26196 483 aaKnown RBP eCLIP13.04□□□□□ -0.32
BRCA1-209ENST00000470026 TMED10P49755 219 aaKnown RBP13.04□□□□□ -0.32
BRCA1-209ENST00000470026 CASP9P55211 416 aa13.04□□□□□ -0.32
BRCA1-209ENST00000470026 DEFB103AP81534 67 aa13.04□□□□□ -0.32
BRCA1-209ENST00000470026 TAP2Q03519 686 aa13.04□□□□□ -0.32
BRCA1-209ENST00000470026 SELENBP1Q13228 472 aa13.04□□□□□ -0.32
BRCA1-209ENST00000470026 MAPK11Q15759 364 aa13.04□□□□□ -0.32
BRCA1-209ENST00000470026 FRMPD2BQ6IN97 320 aa13.04□□□□□ -0.32
BRCA1-209ENST00000470026 KLHL17Q6TDP4 642 aa13.04□□□□□ -0.32
BRCA1-209ENST00000470026 ANGPTL8Q6UXH0 198 aa13.04□□□□□ -0.32
BRCA1-209ENST00000470026 ATCAYQ86WG3 371 aa13.04□□□□□ -0.32
BRCA1-209ENST00000470026 SYTL1Q8IYJ3 562 aa13.04□□□□□ -0.32
BRCA1-209ENST00000470026 UTP15Q8TED0 518 aaKnown RBP13.04□□□□□ -0.32
BRCA1-209ENST00000470026 CHAC2Q8WUX2 184 aa13.04□□□□□ -0.32
BRCA1-209ENST00000470026 SLC5A11Q8WWX8 675 aa13.04□□□□□ -0.32
BRCA1-209ENST00000470026 HPS1Q92902 700 aa13.04□□□□□ -0.32
BRCA1-209ENST00000470026 TOX2Q96NM4 488 aa13.04□□□□□ -0.32
BRCA1-209ENST00000470026 CENPOQ9BU64 300 aa13.04□□□□□ -0.32
BRCA1-209ENST00000470026 TAPBPLQ9BX59 468 aa13.04□□□□□ -0.32
BRCA1-209ENST00000470026 OR51B5Q9H339 312 aa13.04□□□□□ -0.32
BRCA1-209ENST00000470026 ITM2CQ9NQX7 267 aa13.04□□□□□ -0.32
BRCA1-209ENST00000470026 IMPAD1Q9NX62 359 aa13.04□□□□□ -0.32
BRCA1-209ENST00000470026 MS4A12Q9NXJ0 267 aa13.04□□□□□ -0.32
BRCA1-209ENST00000470026 MARK1Q9P0L2 795 aa13.04□□□□□ -0.32
BRCA1-209ENST00000470026 DUSP12Q9UNI6 340 aa13.04□□□□□ -0.32
BRCA1-209ENST00000470026 A0A1W2PRB8 838 aa13.04□□□□□ -0.32
BRCA1-209ENST00000470026 GADD45GO95257 159 aa13.04□□□□□ -0.32
BRCA1-209ENST00000470026 GBAP04062 536 aa13.04□□□□□ -0.32
BRCA1-209ENST00000470026 SERPINB1P30740 379 aa13.04□□□□□ -0.32
BRCA1-209ENST00000470026 MAGEA10P43363 369 aaPredicted RBP13.04□□□□□ -0.32
BRCA1-209ENST00000470026 ALDH9A1P49189 494 aa13.04□□□□□ -0.32
BRCA1-209ENST00000470026 CRISP1P54107 249 aa13.04□□□□□ -0.32
BRCA1-209ENST00000470026 CRISP3P54108 245 aa13.04□□□□□ -0.32
BRCA1-209ENST00000470026 TAS2R50P59544 299 aa13.04□□□□□ -0.32
BRCA1-209ENST00000470026 CDC42P60953 191 aa13.04□□□□□ -0.32
BRCA1-209ENST00000470026 SLC13A2Q13183 592 aa13.04□□□□□ -0.32
BRCA1-209ENST00000470026 SOWAHCQ53LP3 525 aaPredicted RBP13.04□□□□□ -0.32
BRCA1-209ENST00000470026 HIST2H2AA3Q6FI13 130 aa13.04□□□□□ -0.32
BRCA1-209ENST00000470026 PARP16Q8N5Y8 322 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms