RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 PCYOX1LQ8NBM8 494 aa16.76■□□□□ 0.27
MRPL28-208ENST00000469744 TUBGCP3Q96CW5 907 aa16.76■□□□□ 0.27
MRPL28-208ENST00000469744 SDR39U1Q9NRG7 319 aaPredicted RBP16.76■□□□□ 0.27
MRPL28-208ENST00000469744 AP1M2Q9Y6Q5 423 aa16.76■□□□□ 0.27
MRPL28-208ENST00000469744 C9J4A7 227 aa16.75■□□□□ 0.27
MRPL28-208ENST00000469744 OTCP00480 354 aa16.75■□□□□ 0.27
MRPL28-208ENST00000469744 ENO2P09104 434 aaPredicted RBP16.75■□□□□ 0.27
MRPL28-208ENST00000469744 MPC1LP0DKB6 136 aa16.75■□□□□ 0.27
MRPL28-208ENST00000469744 ATP6V1C1P21283 382 aa16.75■□□□□ 0.27
MRPL28-208ENST00000469744 AGXTP21549 392 aa16.75■□□□□ 0.27
MRPL28-208ENST00000469744 PSME3P61289 254 aa16.75■□□□□ 0.27
MRPL28-208ENST00000469744 CDKL1Q00532 357 aa16.75■□□□□ 0.27
MRPL28-208ENST00000469744 MMEL1Q495T6 779 aa16.75■□□□□ 0.27
MRPL28-208ENST00000469744 MLIPQ5VWP3 458 aa16.75■□□□□ 0.27
MRPL28-208ENST00000469744 RHBDD2Q6NTF9 364 aa16.75■□□□□ 0.27
MRPL28-208ENST00000469744 C8orf82Q6P1X6 216 aaPredicted RBP16.75■□□□□ 0.27
MRPL28-208ENST00000469744 ZFP1Q6P2D0 407 aa16.75■□□□□ 0.27
MRPL28-208ENST00000469744 TMEM151BQ8IW70 566 aa16.75■□□□□ 0.27
MRPL28-208ENST00000469744 RAB42Q8N4Z0 105 aa16.75■□□□□ 0.27
MRPL28-208ENST00000469744 ADAMTS17Q8TE56 1095 aa16.75■□□□□ 0.27
MRPL28-208ENST00000469744 NRG4Q8WWG1 115 aa16.75■□□□□ 0.27
MRPL28-208ENST00000469744 DNAJC9Q8WXX5 260 aa16.75■□□□□ 0.27
MRPL28-208ENST00000469744 DLG3Q92796 817 aa16.75■□□□□ 0.27
MRPL28-208ENST00000469744 GBP5Q96PP8 586 aa16.75■□□□□ 0.27
MRPL28-208ENST00000469744 NPAS2Q99743 824 aa16.75■□□□□ 0.27
MRPL28-208ENST00000469744 ACAT2Q9BWD1 397 aa16.75■□□□□ 0.27
MRPL28-208ENST00000469744 CCDC167Q9P0B6 97 aa16.75■□□□□ 0.27
MRPL28-208ENST00000469744 ZNF225Q9UK10 706 aa16.75■□□□□ 0.27
MRPL28-208ENST00000469744 SETXQ7Z333 2677 aaKnown RBP16.75■□□□□ 0.27
MRPL28-208ENST00000469744 FLNBO75369 2602 aaKnown RBP16.74■□□□□ 0.27
MRPL28-208ENST00000469744 ATP6AP2A0A1C7CYW4 349 aa16.74■□□□□ 0.27
MRPL28-208ENST00000469744 A0A1W2PPV9 198 aa16.74■□□□□ 0.27
MRPL28-208ENST00000469744 NCF1BA6NI72 391 aaPredicted RBP16.74■□□□□ 0.27
MRPL28-208ENST00000469744 NCF1CA8MVU1 366 aaPredicted RBP16.74■□□□□ 0.27
MRPL28-208ENST00000469744 FBP2O00757 339 aa16.74■□□□□ 0.27
MRPL28-208ENST00000469744 SLC16A5O15375 505 aa16.74■□□□□ 0.27
MRPL28-208ENST00000469744 CTSVO60911 334 aa16.74■□□□□ 0.27
MRPL28-208ENST00000469744 ATP6AP2O75787 350 aa16.74■□□□□ 0.27
MRPL28-208ENST00000469744 NCF1P14598 390 aaPredicted RBP16.74■□□□□ 0.27
MRPL28-208ENST00000469744 PIK3CGP48736 1102 aa16.74■□□□□ 0.27
MRPL28-208ENST00000469744 TSTA3Q13630 321 aaPredicted RBP16.74■□□□□ 0.27
MRPL28-208ENST00000469744 GTF2H2Q13888 395 aa16.74■□□□□ 0.27
MRPL28-208ENST00000469744 MUM1Q2TAK8 710 aa16.74■□□□□ 0.27
MRPL28-208ENST00000469744 SMU1Q2TAY7 513 aa16.74■□□□□ 0.27
MRPL28-208ENST00000469744 SPATS1Q496A3 300 aa16.74■□□□□ 0.27
MRPL28-208ENST00000469744 GTF2H2CQ6P1K8 395 aa16.74■□□□□ 0.27
MRPL28-208ENST00000469744 PRMT9Q6P2P2 845 aa16.74■□□□□ 0.27
MRPL28-208ENST00000469744 SUSD1Q6UWL2 747 aa16.74■□□□□ 0.27
MRPL28-208ENST00000469744 NEK10Q6ZWH5 1172 aa16.74■□□□□ 0.27
MRPL28-208ENST00000469744 GOLGA7Q7Z5G4 137 aa16.74■□□□□ 0.27
MRPL28-208ENST00000469744 FUNDC1Q8IVP5 155 aa16.74■□□□□ 0.27
MRPL28-208ENST00000469744 TCAIMQ8N3R3 496 aa16.74■□□□□ 0.27
MRPL28-208ENST00000469744 OR2L3Q8NG85 312 aa16.74■□□□□ 0.27
MRPL28-208ENST00000469744 OR2A1Q8NGT9 310 aa16.74■□□□□ 0.27
MRPL28-208ENST00000469744 THAP4Q8WY91 577 aa16.74■□□□□ 0.27
MRPL28-208ENST00000469744 ZNF570Q96NI8 536 aa16.74■□□□□ 0.27
MRPL28-208ENST00000469744 KCNA7Q96RP8 456 aa16.74■□□□□ 0.27
MRPL28-208ENST00000469744 DPH2Q9BQC3 489 aaPredicted RBP16.74■□□□□ 0.27
MRPL28-208ENST00000469744 NDC1Q9BTX1 674 aa16.74■□□□□ 0.27
MRPL28-208ENST00000469744 INTS7Q9NVH2 962 aaKnown RBP16.74■□□□□ 0.27
MRPL28-208ENST00000469744 AIG1Q9NVV5 245 aa16.74■□□□□ 0.27
MRPL28-208ENST00000469744 NMRK1Q9NWW6 199 aa16.74■□□□□ 0.27
MRPL28-208ENST00000469744 SUCOQ9UBS9 1254 aaKnown RBP16.74■□□□□ 0.27
MRPL28-208ENST00000469744 GPR45Q9Y5Y3 372 aa16.74■□□□□ 0.27
MRPL28-208ENST00000469744 ANKRD12Q6UB98 2062 aa16.74■□□□□ 0.27
MRPL28-208ENST00000469744 UBR5O95071 2799 aaPredicted RBP16.74■□□□□ 0.27
MRPL28-208ENST00000469744 MRASO14807 208 aa16.73■□□□□ 0.27
MRPL28-208ENST00000469744 PSIP1O75475 530 aaKnown RBP16.73■□□□□ 0.27
MRPL28-208ENST00000469744 BCAS2O75934 225 aaPredicted RBP16.73■□□□□ 0.27
MRPL28-208ENST00000469744 PDGFAP04085 211 aa16.73■□□□□ 0.27
MRPL28-208ENST00000469744 C8GP07360 202 aa16.73■□□□□ 0.27
MRPL28-208ENST00000469744 LINC00032P0C843 101 aa16.73■□□□□ 0.27
MRPL28-208ENST00000469744 ALAS2P22557 587 aa16.73■□□□□ 0.27
MRPL28-208ENST00000469744 ERVK-8P63133 956 aa16.73■□□□□ 0.27
MRPL28-208ENST00000469744 DCDP81605 110 aaKnown RBP16.73■□□□□ 0.27
MRPL28-208ENST00000469744 TLE1Q04724 770 aa16.73■□□□□ 0.27
MRPL28-208ENST00000469744 TRAP1Q12931 704 aaKnown RBP16.73■□□□□ 0.27
MRPL28-208ENST00000469744 CEACAM7Q14002 265 aa16.73■□□□□ 0.27
MRPL28-208ENST00000469744 PDCD4Q53EL6 469 aaKnown RBP16.73■□□□□ 0.27
MRPL28-208ENST00000469744 TCHHL1Q5QJ38 904 aaPredicted RBP16.73■□□□□ 0.27
MRPL28-208ENST00000469744 APLFQ8IW19 511 aaPredicted RBP16.73■□□□□ 0.27
MRPL28-208ENST00000469744 OR9A1PQ8NGU1 263 aa16.73■□□□□ 0.27
MRPL28-208ENST00000469744 SLC26A7Q8TE54 656 aa16.73■□□□□ 0.27
MRPL28-208ENST00000469744 HOPXQ9BPY8 73 aaPredicted RBP16.73■□□□□ 0.27
MRPL28-208ENST00000469744 CD244Q9BZW8 370 aa16.73■□□□□ 0.27
MRPL28-208ENST00000469744 BRINP2Q9C0B6 783 aa16.73■□□□□ 0.27
MRPL28-208ENST00000469744 ING2Q9H160 280 aa16.73■□□□□ 0.27
MRPL28-208ENST00000469744 VCX3BQ9H321 246 aa16.73■□□□□ 0.27
MRPL28-208ENST00000469744 SPATA7Q9P0W8 599 aa16.73■□□□□ 0.27
MRPL28-208ENST00000469744 IFT80Q9P2H3 777 aaPredicted RBP16.73■□□□□ 0.27
MRPL28-208ENST00000469744 SRPK3Q9UPE1 567 aa16.73■□□□□ 0.27
MRPL28-208ENST00000469744 HEATR5BQ9P2D3 2071 aa16.73■□□□□ 0.27
MRPL28-208ENST00000469744 A0A1B0GTL3 188 aa16.73■□□□□ 0.27
MRPL28-208ENST00000469744 TAPBPO15533 448 aa16.73■□□□□ 0.27
MRPL28-208ENST00000469744 CNOT3O75175 753 aaKnown RBP16.73■□□□□ 0.27
MRPL28-208ENST00000469744 KLF7O75840 302 aaPredicted RBP16.73■□□□□ 0.27
MRPL28-208ENST00000469744 WDR47O94967 919 aa16.73■□□□□ 0.27
MRPL28-208ENST00000469744 OR4F21O95013 312 aa16.73■□□□□ 0.27
MRPL28-208ENST00000469744 CATP04040 527 aaKnown RBP16.73■□□□□ 0.27
MRPL28-208ENST00000469744 OTX2P32243 289 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms