RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 PIGKQ92643 395 aa18.04■□□□□ 0.48
SMC4-209ENST00000468653 FAM120BQ96EK7 910 aaKnown RBP18.04■□□□□ 0.48
SMC4-209ENST00000468653 FAIM2Q9BWQ8 316 aa18.04■□□□□ 0.48
SMC4-209ENST00000468653 ABCG4Q9H172 646 aa18.04■□□□□ 0.48
SMC4-209ENST00000468653 KAT8Q9H7Z6 458 aaKnown RBP18.04■□□□□ 0.48
SMC4-209ENST00000468653 IL21RQ9HBE5 538 aa18.04■□□□□ 0.48
SMC4-209ENST00000468653 TEX10Q9NXF1 929 aaPredicted RBP18.04■□□□□ 0.48
SMC4-209ENST00000468653 LOC105369274A0A096LPK9 316 aa18.03■□□□□ 0.48
SMC4-209ENST00000468653 LOC102723532A0A0G2JNH3 316 aa18.03■□□□□ 0.48
SMC4-209ENST00000468653 A0A1W2PRB8 838 aa18.03■□□□□ 0.48
SMC4-209ENST00000468653 TCRBV3S1A0A5B6 114 aa18.03■□□□□ 0.48
SMC4-209ENST00000468653 AQP12BA6NM10 295 aa18.03■□□□□ 0.48
SMC4-209ENST00000468653 H0YGG7 62 aa18.03■□□□□ 0.48
SMC4-209ENST00000468653 GSTA4O15217 222 aa18.03■□□□□ 0.48
SMC4-209ENST00000468653 TBX19O60806 448 aa18.03■□□□□ 0.48
SMC4-209ENST00000468653 C6orf47O95873 294 aa18.03■□□□□ 0.48
SMC4-209ENST00000468653 ZNF888P0CJ79 500 aaPredicted RBP18.03■□□□□ 0.48
SMC4-209ENST00000468653 ENGP17813 658 aa18.03■□□□□ 0.48
SMC4-209ENST00000468653 CAPZBP47756 277 aa18.03■□□□□ 0.48
SMC4-209ENST00000468653 RXRGP48443 463 aa18.03■□□□□ 0.48
SMC4-209ENST00000468653 ARF3P61204 181 aaPredicted RBP18.03■□□□□ 0.48
SMC4-209ENST00000468653 BTN3A2P78410 334 aa18.03■□□□□ 0.48
SMC4-209ENST00000468653 BNC1Q01954 994 aa18.03■□□□□ 0.48
SMC4-209ENST00000468653 PRSS53Q2L4Q9 553 aa18.03■□□□□ 0.48
SMC4-209ENST00000468653 C6orf132Q5T0Z8 1188 aa18.03■□□□□ 0.48
SMC4-209ENST00000468653 FRMPD2BQ6IN97 320 aa18.03■□□□□ 0.48
SMC4-209ENST00000468653 RNF44Q7L0R7 432 aa18.03■□□□□ 0.48
SMC4-209ENST00000468653 AQP12AQ8IXF9 295 aa18.03■□□□□ 0.48
SMC4-209ENST00000468653 OR4N4Q8N0Y3 316 aa18.03■□□□□ 0.48
SMC4-209ENST00000468653 ZCCHC7Q8N3Z6 543 aaKnown RBP18.03■□□□□ 0.48
SMC4-209ENST00000468653 SLC25A45Q8N413 288 aa18.03■□□□□ 0.48
SMC4-209ENST00000468653 NATD1Q8N6N6 113 aa18.03■□□□□ 0.48
SMC4-209ENST00000468653 DTWD2Q8NBA8 298 aa18.03■□□□□ 0.48
SMC4-209ENST00000468653 MAGEL2Q9UJ55 1249 aa18.03■□□□□ 0.48
SMC4-209ENST00000468653 ERVK-11Q9UQG0 969 aa18.03■□□□□ 0.48
SMC4-209ENST00000468653 P2RX6O15547 441 aa18.02■□□□□ 0.48
SMC4-209ENST00000468653 EIF2S1P05198 315 aaKnown RBP18.02■□□□□ 0.48
SMC4-209ENST00000468653 ZCCHC18P0CG32 403 aa18.02■□□□□ 0.48
SMC4-209ENST00000468653 DRD2P14416 443 aa18.02■□□□□ 0.48
SMC4-209ENST00000468653 ST6GAL1P15907 406 aa18.02■□□□□ 0.48
SMC4-209ENST00000468653 CERS1P27544 350 aa18.02■□□□□ 0.48
SMC4-209ENST00000468653 MPEG1Q2M385 716 aa18.02■□□□□ 0.48
SMC4-209ENST00000468653 NDUFAF5Q5TEU4 345 aa18.02■□□□□ 0.48
SMC4-209ENST00000468653 GLYATQ6IB77 296 aa18.02■□□□□ 0.48
SMC4-209ENST00000468653 LRRC74BQ6ZQY2 392 aa18.02■□□□□ 0.48
SMC4-209ENST00000468653 ZNF655Q8N720 491 aaPredicted RBP18.02■□□□□ 0.48
SMC4-209ENST00000468653 UTP15Q8TED0 518 aaKnown RBP18.02■□□□□ 0.48
SMC4-209ENST00000468653 PHF12Q96QT6 1004 aa18.02■□□□□ 0.48
SMC4-209ENST00000468653 ROGDIQ9GZN7 287 aa18.02■□□□□ 0.48
SMC4-209ENST00000468653 LRIT1Q9P2V4 623 aa18.02■□□□□ 0.48
SMC4-209ENST00000468653 ZNF282Q9UDV7 671 aaPredicted RBP18.02■□□□□ 0.48
SMC4-209ENST00000468653 HBA1P69905 142 aa18.02■□□□□ 0.47
SMC4-209ENST00000468653 SUZ12Q15022 739 aaKnown RBP18.02■□□□□ 0.47
SMC4-209ENST00000468653 FXNQ16595 210 aa18.02■□□□□ 0.47
SMC4-209ENST00000468653 DGLUCYQ7Z3D6 616 aa18.02■□□□□ 0.47
SMC4-209ENST00000468653 ARL10Q8N8L6 244 aa18.02■□□□□ 0.47
SMC4-209ENST00000468653 C19orf47Q8N9M1 422 aaKnown RBP18.02■□□□□ 0.47
SMC4-209ENST00000468653 ZCCHC10Q8TBK6 192 aa18.02■□□□□ 0.47
SMC4-209ENST00000468653 TRAPPC9Q96Q05 1148 aa18.02■□□□□ 0.47
SMC4-209ENST00000468653 CCDC3Q9BQI4 270 aa18.02■□□□□ 0.47
SMC4-209ENST00000468653 TACO1Q9BSH4 297 aaKnown RBP18.02■□□□□ 0.47
SMC4-209ENST00000468653 TPT1P8Q9HAU6 139 aa18.02■□□□□ 0.47
SMC4-209ENST00000468653 FBXO4Q9UKT5 387 aa18.02■□□□□ 0.47
SMC4-209ENST00000468653 FBXW2Q9UKT8 454 aa18.02■□□□□ 0.47
SMC4-209ENST00000468653 RNF215Q9Y6U7 377 aa18.02■□□□□ 0.47
SMC4-209ENST00000468653 TP53BP1Q12888 1972 aaPredicted RBP18.01■□□□□ 0.47
SMC4-209ENST00000468653 ELOVL7A1L3X0 281 aa18.01■□□□□ 0.47
SMC4-209ENST00000468653 SLC9B1P1A6NJY1 282 aa18.01■□□□□ 0.47
SMC4-209ENST00000468653 FAM220BPB1ANY3 271 aa18.01■□□□□ 0.47
SMC4-209ENST00000468653 PDPK1O15530 556 aa18.01■□□□□ 0.47
SMC4-209ENST00000468653 PPIBP23284 216 aaKnown RBP18.01■□□□□ 0.47
SMC4-209ENST00000468653 ALDH4A1P30038 563 aa18.01■□□□□ 0.47
SMC4-209ENST00000468653 GCKP35557 465 aa18.01■□□□□ 0.47
SMC4-209ENST00000468653 EPHA4P54764 986 aa18.01■□□□□ 0.47
SMC4-209ENST00000468653 ABHD18Q0P651 414 aa18.01■□□□□ 0.47
SMC4-209ENST00000468653 MAP7Q14244 749 aa18.01■□□□□ 0.47
SMC4-209ENST00000468653 SHBQ15464 509 aa18.01■□□□□ 0.47
SMC4-209ENST00000468653 MRM1Q6IN84 353 aaKnown RBP18.01■□□□□ 0.47
SMC4-209ENST00000468653 FAM92BQ6ZTR7 304 aa18.01■□□□□ 0.47
SMC4-209ENST00000468653 ABHD13Q7L211 337 aa18.01■□□□□ 0.47
SMC4-209ENST00000468653 CALHM3Q86XJ0 350 aa18.01■□□□□ 0.47
SMC4-209ENST00000468653 TRIML2Q8N7C3 387 aa18.01■□□□□ 0.47
SMC4-209ENST00000468653 GOT1L1Q8NHS2 421 aaPredicted RBP18.01■□□□□ 0.47
SMC4-209ENST00000468653 EXOSC8Q96B26 276 aaKnown RBP18.01■□□□□ 0.47
SMC4-209ENST00000468653 ZNF764Q96H86 408 aaPredicted RBP18.01■□□□□ 0.47
SMC4-209ENST00000468653 C1GALT1Q9NS00 363 aa18.01■□□□□ 0.47
SMC4-209ENST00000468653 LYARQ9NX58 379 aaKnown RBP18.01■□□□□ 0.47
SMC4-209ENST00000468653 C5AR2Q9P296 337 aa18.01■□□□□ 0.47
SMC4-209ENST00000468653 ASB4Q9Y574 426 aa18.01■□□□□ 0.47
SMC4-209ENST00000468653 AP4S1Q9Y587 144 aa18.01■□□□□ 0.47
SMC4-209ENST00000468653 ZSCAN9O15535 394 aaPredicted RBP18■□□□□ 0.47
SMC4-209ENST00000468653 SH3BP5O60239 455 aa18■□□□□ 0.47
SMC4-209ENST00000468653 GGT1P19440 569 aa18■□□□□ 0.47
SMC4-209ENST00000468653 SLC7A1P30825 629 aa18■□□□□ 0.47
SMC4-209ENST00000468653 VHLP40337 213 aa18■□□□□ 0.47
SMC4-209ENST00000468653 VSX2P58304 361 aaPredicted RBP18■□□□□ 0.47
SMC4-209ENST00000468653 GAB1Q13480 694 aa18■□□□□ 0.47
SMC4-209ENST00000468653 CYP51A1Q16850 503 aa18■□□□□ 0.47
SMC4-209ENST00000468653 FAM180BQ6P0A1 224 aa18■□□□□ 0.47
SMC4-209ENST00000468653 RNF111Q6ZNA4 994 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms