RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 ALKBH5Q6P6C2 394 aaKnown RBP3.14□□□□□ -1.91
HMGXB4-205ENST00000464480 TRIM65Q6PJ69 517 aa3.14□□□□□ -1.91
HMGXB4-205ENST00000464480 LCLAT1Q6UWP7 414 aa3.14□□□□□ -1.91
HMGXB4-205ENST00000464480 TMEM64Q6YI46 380 aa3.14□□□□□ -1.91
HMGXB4-205ENST00000464480 Q71RC1 249 aaPredicted RBP3.14□□□□□ -1.91
HMGXB4-205ENST00000464480 NLRP14Q86W24 1093 aa3.14□□□□□ -1.91
HMGXB4-205ENST00000464480 PEX5LQ8IYB4 626 aa3.14□□□□□ -1.91
HMGXB4-205ENST00000464480 CNPY4Q8N129 248 aa3.14□□□□□ -1.91
HMGXB4-205ENST00000464480 SFRP1Q8N474 314 aa3.14□□□□□ -1.91
HMGXB4-205ENST00000464480 OR9Q2Q8NGE9 314 aa3.14□□□□□ -1.91
HMGXB4-205ENST00000464480 OR5M9Q8NGP3 310 aa3.14□□□□□ -1.91
HMGXB4-205ENST00000464480 HAS2Q92819 552 aa3.14□□□□□ -1.91
HMGXB4-205ENST00000464480 FAM46BQ96A09 425 aa3.14□□□□□ -1.91
HMGXB4-205ENST00000464480 ZNF274Q96GC6 653 aaPredicted RBP3.14□□□□□ -1.91
HMGXB4-205ENST00000464480 GUCD1Q96NT3 240 aa3.14□□□□□ -1.91
HMGXB4-205ENST00000464480 OVOL2Q9BRP0 275 aa3.14□□□□□ -1.91
HMGXB4-205ENST00000464480 UBE2TQ9NPD8 197 aaPredicted RBP3.14□□□□□ -1.91
HMGXB4-205ENST00000464480 ZDHHC18Q9NUE0 388 aa3.14□□□□□ -1.91
HMGXB4-205ENST00000464480 NLGN3Q9NZ94 848 aa3.14□□□□□ -1.91
HMGXB4-205ENST00000464480 ZNF319Q9P2F9 582 aa3.14□□□□□ -1.91
HMGXB4-205ENST00000464480 KLK11Q9UBX7 282 aa3.14□□□□□ -1.91
HMGXB4-205ENST00000464480 TEKT2Q9UIF3 430 aa3.14□□□□□ -1.91
HMGXB4-205ENST00000464480 UMODL1Q5DID0 1318 aa3.14□□□□□ -1.91
HMGXB4-205ENST00000464480 LOC105371242A0A075B767 164 aa3.13□□□□□ -1.91
HMGXB4-205ENST00000464480 LMO7DNF2Z398 122 aa3.13□□□□□ -1.91
HMGXB4-205ENST00000464480 K7EQD1 137 aa3.13□□□□□ -1.91
HMGXB4-205ENST00000464480 RNF103O00237 685 aa3.13□□□□□ -1.91
HMGXB4-205ENST00000464480 FGF19O95750 216 aa3.13□□□□□ -1.91
HMGXB4-205ENST00000464480 ODC1P11926 461 aa3.13□□□□□ -1.91
HMGXB4-205ENST00000464480 SKILP12757 684 aa3.13□□□□□ -1.91
HMGXB4-205ENST00000464480 P4HA1P13674 534 aa3.13□□□□□ -1.91
HMGXB4-205ENST00000464480 STMN1P16949 149 aa3.13□□□□□ -1.91
HMGXB4-205ENST00000464480 GJB2P29033 226 aa3.13□□□□□ -1.91
HMGXB4-205ENST00000464480 PDHA2P29803 388 aa3.13□□□□□ -1.91
HMGXB4-205ENST00000464480 TNFSF10P50591 281 aa3.13□□□□□ -1.91
HMGXB4-205ENST00000464480 UCP2P55851 309 aa3.13□□□□□ -1.91
HMGXB4-205ENST00000464480 TMEM50BP56557 158 aa3.13□□□□□ -1.91
HMGXB4-205ENST00000464480 BTG1P62324 171 aa3.13□□□□□ -1.91
HMGXB4-205ENST00000464480 GABPAQ06546 454 aa3.13□□□□□ -1.91
HMGXB4-205ENST00000464480 SPHARQ15513 63 aa3.13□□□□□ -1.91
HMGXB4-205ENST00000464480 CDC37Q16543 378 aaPredicted RBP3.13□□□□□ -1.91
HMGXB4-205ENST00000464480 RFTN2Q52LD8 501 aaPredicted RBP3.13□□□□□ -1.91
HMGXB4-205ENST00000464480 SNRNP48Q6IEG0 339 aaKnown RBP3.13□□□□□ -1.91
HMGXB4-205ENST00000464480 B3GLCTQ6Y288 498 aa3.13□□□□□ -1.91
HMGXB4-205ENST00000464480 CYP4V2Q6ZWL3 525 aaPredicted RBP3.13□□□□□ -1.91
HMGXB4-205ENST00000464480 LRRTM1Q86UE6 522 aa3.13□□□□□ -1.91
HMGXB4-205ENST00000464480 ZNF410Q86VK4 478 aa3.13□□□□□ -1.91
HMGXB4-205ENST00000464480 SERPINA12Q8IW75 414 aa3.13□□□□□ -1.91
HMGXB4-205ENST00000464480 CNTN4Q8IWV2 1026 aa3.13□□□□□ -1.91
HMGXB4-205ENST00000464480 RTL3Q8N8U3 475 aaKnown RBP3.13□□□□□ -1.91
HMGXB4-205ENST00000464480 CLEC1AQ8NC01 280 aa3.13□□□□□ -1.91
HMGXB4-205ENST00000464480 OR10G7Q8NGN6 311 aa3.13□□□□□ -1.91
HMGXB4-205ENST00000464480 CD99L2Q8TCZ2 262 aa3.13□□□□□ -1.91
HMGXB4-205ENST00000464480 SMPDL3AQ92484 453 aa3.13□□□□□ -1.91
HMGXB4-205ENST00000464480 WBP2Q969T9 261 aa3.13□□□□□ -1.91
HMGXB4-205ENST00000464480 CCDC47Q96A33 483 aaKnown RBP3.13□□□□□ -1.91
HMGXB4-205ENST00000464480 TRIM51Q9BSJ1 452 aa3.13□□□□□ -1.91
HMGXB4-205ENST00000464480 MCRIP2Q9BUT9 160 aaKnown RBP3.13□□□□□ -1.91
HMGXB4-205ENST00000464480 UPF3AQ9H1J1 476 aaKnown RBP3.13□□□□□ -1.91
HMGXB4-205ENST00000464480 THAP9Q9H5L6 903 aa3.13□□□□□ -1.91
HMGXB4-205ENST00000464480 ZNF665Q9H7R5 613 aa3.13□□□□□ -1.91
HMGXB4-205ENST00000464480 MARCH7Q9H992 704 aa3.13□□□□□ -1.91
HMGXB4-205ENST00000464480 ZCCHC3Q9NUD5 404 aaKnown RBP3.13□□□□□ -1.91
HMGXB4-205ENST00000464480 NDE1Q9NXR1 346 aa3.13□□□□□ -1.91
HMGXB4-205ENST00000464480 CYP39A1Q9NYL5 469 aa3.13□□□□□ -1.91
HMGXB4-205ENST00000464480 PLEK2Q9NYT0 353 aa3.13□□□□□ -1.91
HMGXB4-205ENST00000464480 AKAP7Q9P0M2 348 aaPredicted RBP3.13□□□□□ -1.91
HMGXB4-205ENST00000464480 HMG20BQ9P0W2 317 aa3.13□□□□□ -1.91
HMGXB4-205ENST00000464480 MDFICQ9P1T7 246 aa3.13□□□□□ -1.91
HMGXB4-205ENST00000464480 MOSPD1Q9UJG1 213 aa3.13□□□□□ -1.91
HMGXB4-205ENST00000464480 PILRAQ9UKJ1 303 aa3.13□□□□□ -1.91
HMGXB4-205ENST00000464480 EXOC7Q9UPT5 735 aa3.13□□□□□ -1.91
HMGXB4-205ENST00000464480 NEDD4P46934 1319 aa3.13□□□□□ -1.91
HMGXB4-205ENST00000464480 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.12□□□□□ -1.91
HMGXB4-205ENST00000464480 SYCE3A1L190 88 aa3.12□□□□□ -1.91
HMGXB4-205ENST00000464480 NPIPB9F8W1W9 429 aa3.12□□□□□ -1.91
HMGXB4-205ENST00000464480 SLC28A1O00337 649 aa3.12□□□□□ -1.91
HMGXB4-205ENST00000464480 CCSO14618 274 aa3.12□□□□□ -1.91
HMGXB4-205ENST00000464480 TFECO14948 347 aaPredicted RBP3.12□□□□□ -1.91
HMGXB4-205ENST00000464480 PSMD3O43242 534 aa3.12□□□□□ -1.91
HMGXB4-205ENST00000464480 B4GAT1O43505 415 aa3.12□□□□□ -1.91
HMGXB4-205ENST00000464480 ECE2O60344 883 aa3.12□□□□□ -1.91
HMGXB4-205ENST00000464480 ATP6V1G1O75348 118 aa3.12□□□□□ -1.91
HMGXB4-205ENST00000464480 DUS4LO95620 317 aaKnown RBP3.12□□□□□ -1.91
HMGXB4-205ENST00000464480 MT-ND3P03897 115 aa3.12□□□□□ -1.91
HMGXB4-205ENST00000464480 ABHD2P08910 425 aa3.12□□□□□ -1.91
HMGXB4-205ENST00000464480 NUDT17P0C025 328 aa3.12□□□□□ -1.91
HMGXB4-205ENST00000464480 EZRP15311 586 aaKnown RBP3.12□□□□□ -1.91
HMGXB4-205ENST00000464480 UGT1A6P19224 532 aa3.12□□□□□ -1.91
HMGXB4-205ENST00000464480 EDNRAP25101 427 aa3.12□□□□□ -1.91
HMGXB4-205ENST00000464480 STIP1P31948 543 aaKnown RBP3.12□□□□□ -1.91
HMGXB4-205ENST00000464480 EVCP57679 992 aa3.12□□□□□ -1.91
HMGXB4-205ENST00000464480 ABCE1P61221 599 aaKnown RBP3.12□□□□□ -1.91
HMGXB4-205ENST00000464480 ERVK-16P61578 105 aa3.12□□□□□ -1.91
HMGXB4-205ENST00000464480 ZNF177Q13360 481 aaPredicted RBP3.12□□□□□ -1.91
HMGXB4-205ENST00000464480 TSTA3Q13630 321 aaPredicted RBP3.12□□□□□ -1.91
HMGXB4-205ENST00000464480 GIT2Q14161 759 aa3.12□□□□□ -1.91
HMGXB4-205ENST00000464480 FASTKD3Q14CZ7 662 aaKnown RBP3.12□□□□□ -1.91
HMGXB4-205ENST00000464480 FAM189A2Q15884 450 aa3.12□□□□□ -1.91
HMGXB4-205ENST00000464480 C3AR1Q16581 482 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms