RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 KELP23276 732 aa8.73□□□□□ -1.01
HPS4-208ENST00000464362 GSTM2P28161 218 aa8.73□□□□□ -1.01
HPS4-208ENST00000464362 HOXD9P28356 352 aaPredicted RBP8.73□□□□□ -1.01
HPS4-208ENST00000464362 VIPR1P32241 457 aa8.73□□□□□ -1.01
HPS4-208ENST00000464362 ACTR1BP42025 376 aa8.73□□□□□ -1.01
HPS4-208ENST00000464362 ZNF140P52738 457 aaPredicted RBP8.73□□□□□ -1.01
HPS4-208ENST00000464362 ACTR1AP61163 376 aa8.73□□□□□ -1.01
HPS4-208ENST00000464362 TBPL1P62380 186 aa8.73□□□□□ -1.01
HPS4-208ENST00000464362 NTHL1P78549 312 aa8.73□□□□□ -1.01
HPS4-208ENST00000464362 NDUFA5Q16718 116 aa8.73□□□□□ -1.01
HPS4-208ENST00000464362 RUNDC3AQ59EK9 446 aa8.73□□□□□ -1.01
HPS4-208ENST00000464362 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.73□□□□□ -1.014e-8■□□□□ 10.8
HPS4-208ENST00000464362 PRR23CQ6ZRP0 262 aa8.73□□□□□ -1.01
HPS4-208ENST00000464362 CPA6Q8N4T0 437 aa8.73□□□□□ -1.01
HPS4-208ENST00000464362 LKAAEAR1Q8TD35 194 aa8.73□□□□□ -1.01
HPS4-208ENST00000464362 KCTD7Q96MP8 289 aa8.73□□□□□ -1.01
HPS4-208ENST00000464362 SLC22A12Q96S37 553 aa8.73□□□□□ -1.01
HPS4-208ENST00000464362 RTP3Q9BQQ7 232 aa8.73□□□□□ -1.01
HPS4-208ENST00000464362 DOHHQ9BU89 302 aa8.73□□□□□ -1.01
HPS4-208ENST00000464362 SORBS1Q9BX66 1292 aaKnown RBP8.73□□□□□ -1.01
HPS4-208ENST00000464362 OR51E2Q9H255 320 aa8.73□□□□□ -1.01
HPS4-208ENST00000464362 DPEP2Q9H4A9 486 aa8.73□□□□□ -1.01
HPS4-208ENST00000464362 REEP4Q9H6H4 257 aa8.73□□□□□ -1.01
HPS4-208ENST00000464362 IL36AQ9UHA7 158 aa8.73□□□□□ -1.01
HPS4-208ENST00000464362 ASB1Q9Y576 335 aa8.73□□□□□ -1.01
HPS4-208ENST00000464362 THSD7AQ9UPZ6 1657 aa8.73□□□□□ -1.01
HPS4-208ENST00000464362 TEX28O15482 410 aa8.73□□□□□ -1.01
HPS4-208ENST00000464362 DCDC1P59894 354 aa8.73□□□□□ -1.01
HPS4-208ENST00000464362 EMX1Q04741 257 aaPredicted RBP8.73□□□□□ -1.01
HPS4-208ENST00000464362 WSCD2Q2TBF2 565 aa8.73□□□□□ -1.01
HPS4-208ENST00000464362 MINDY4Q4G0A6 757 aa8.73□□□□□ -1.01
HPS4-208ENST00000464362 ZNF311Q5JNZ3 666 aa8.73□□□□□ -1.01
HPS4-208ENST00000464362 C22orf42Q6IC83 251 aa8.73□□□□□ -1.01
HPS4-208ENST00000464362 FRRS1Q6ZNA5 592 aa8.73□□□□□ -1.01
HPS4-208ENST00000464362 RTL4Q6ZR62 310 aa8.73□□□□□ -1.01
HPS4-208ENST00000464362 NLGN4XQ8N0W4 816 aa8.73□□□□□ -1.01
HPS4-208ENST00000464362 MEIOBQ8N635 442 aa8.73□□□□□ -1.01
HPS4-208ENST00000464362 C12orf76Q8N812 135 aaPredicted RBP8.73□□□□□ -1.01
HPS4-208ENST00000464362 CHDHQ8NE62 594 aaPredicted RBP8.73□□□□□ -1.01
HPS4-208ENST00000464362 MRPL48Q96GC5 212 aaKnown RBP8.73□□□□□ -1.01
HPS4-208ENST00000464362 TTYH2Q9BSA4 534 aa8.73□□□□□ -1.01
HPS4-208ENST00000464362 LINC00597Q9H2U6 94 aa8.73□□□□□ -1.01
HPS4-208ENST00000464362 TAS2R9Q9NYW1 312 aa8.73□□□□□ -1.01
HPS4-208ENST00000464362 GPR52Q9Y2T5 361 aa8.73□□□□□ -1.01
HPS4-208ENST00000464362 PCDHB11Q9Y5F2 797 aa8.73□□□□□ -1.01
HPS4-208ENST00000464362 SCN7AQ01118 1682 aa8.73□□□□□ -1.01
HPS4-208ENST00000464362 HHLA1C9JL84 531 aa8.73□□□□□ -1.01
HPS4-208ENST00000464362 E2F3O00716 465 aa8.73□□□□□ -1.01
HPS4-208ENST00000464362 SEMA3DO95025 777 aa8.73□□□□□ -1.01
HPS4-208ENST00000464362 KLKB1P03952 638 aa8.73□□□□□ -1.01
HPS4-208ENST00000464362 SBK3P0C264 359 aa8.73□□□□□ -1.01
HPS4-208ENST00000464362 MTHFD2P13995 350 aa8.73□□□□□ -1.01
HPS4-208ENST00000464362 CNR2P34972 360 aa8.73□□□□□ -1.01
HPS4-208ENST00000464362 SGSHP51688 502 aa8.73□□□□□ -1.01
HPS4-208ENST00000464362 CDH11P55287 796 aa8.73□□□□□ -1.01
HPS4-208ENST00000464362 RHAGQ02094 409 aa8.73□□□□□ -1.01
HPS4-208ENST00000464362 ZNF155Q12901 538 aaPredicted RBP8.73□□□□□ -1.01
HPS4-208ENST00000464362 ODF4Q2M2E3 257 aa8.73□□□□□ -1.01
HPS4-208ENST00000464362 RPS26P11Q5JNZ5 115 aaPredicted RBP8.73□□□□□ -1.01
HPS4-208ENST00000464362 CTSL3PQ5NE16 218 aa8.73□□□□□ -1.01
HPS4-208ENST00000464362 REEP3Q6NUK4 255 aa8.73□□□□□ -1.01
HPS4-208ENST00000464362 HDDC3Q8N4P3 179 aa8.73□□□□□ -1.01
HPS4-208ENST00000464362 MFSD2AQ8NA29 543 aa8.73□□□□□ -1.01
HPS4-208ENST00000464362 GLYATL1Q969I3 302 aa8.73□□□□□ -1.01
HPS4-208ENST00000464362 RDH12Q96NR8 316 aa8.73□□□□□ -1.01
HPS4-208ENST00000464362 DSN1Q9H410 356 aa8.73□□□□□ -1.01
HPS4-208ENST00000464362 CARS2Q9HA77 564 aaKnown RBP8.73□□□□□ -1.01
HPS4-208ENST00000464362 SLC45A1Q9Y2W3 748 aa8.73□□□□□ -1.01
HPS4-208ENST00000464362 ECM29Q5VYK3 1845 aa8.73□□□□□ -1.01
HPS4-208ENST00000464362 TRIP11Q15643 1979 aa8.73□□□□□ -1.01
HPS4-208ENST00000464362 RREB1Q92766 1687 aa8.72□□□□□ -1.01
HPS4-208ENST00000464362 KRBA1A5PL33 1030 aa8.72□□□□□ -1.01
HPS4-208ENST00000464362 CRHBPP24387 322 aa8.72□□□□□ -1.01
HPS4-208ENST00000464362 TIA1P31483 386 aaKnown RBP eCLIP8.72□□□□□ -1.01
HPS4-208ENST00000464362 NR4A2P43354 598 aa8.72□□□□□ -1.01
HPS4-208ENST00000464362 ATAT1Q5SQI0 421 aa8.72□□□□□ -1.01
HPS4-208ENST00000464362 UBE2Q1Q7Z7E8 422 aa8.72□□□□□ -1.01
HPS4-208ENST00000464362 TMEM173Q86WV6 379 aaPredicted RBP8.72□□□□□ -1.01
HPS4-208ENST00000464362 GALNT12Q8IXK2 581 aa8.72□□□□□ -1.01
HPS4-208ENST00000464362 SLC7A5P1Q8MH63 180 aa8.72□□□□□ -1.01
HPS4-208ENST00000464362 COX18Q8N8Q8 333 aa8.72□□□□□ -1.01
HPS4-208ENST00000464362 SCAIQ8N9R8 606 aa8.72□□□□□ -1.01
HPS4-208ENST00000464362 ATP6V1C2Q8NEY4 427 aa8.72□□□□□ -1.01
HPS4-208ENST00000464362 OR51G2Q8NGK0 314 aa8.72□□□□□ -1.01
HPS4-208ENST00000464362 ZNF583Q96ND8 569 aa8.72□□□□□ -1.01
HPS4-208ENST00000464362 MACROD1Q9BQ69 325 aa8.72□□□□□ -1.01
HPS4-208ENST00000464362 MRPS30Q9NP92 439 aaKnown RBP8.72□□□□□ -1.01
HPS4-208ENST00000464362 MKL2Q9ULH7 1088 aa8.72□□□□□ -1.01
HPS4-208ENST00000464362 HSPB11Q9Y547 144 aa8.72□□□□□ -1.01
HPS4-208ENST00000464362 LAMB1P07942 1786 aa8.72□□□□□ -1.01
HPS4-208ENST00000464362 ALPK2Q86TB3 2170 aa8.72□□□□□ -1.01
HPS4-208ENST00000464362 SMAD9O15198 467 aaKnown RBP8.72□□□□□ -1.01
HPS4-208ENST00000464362 FRS3O43559 492 aa8.72□□□□□ -1.01
HPS4-208ENST00000464362 PRAMEF12O95522 483 aa8.72□□□□□ -1.01
HPS4-208ENST00000464362 HIST1H2ABP04908 130 aa8.72□□□□□ -1.01
HPS4-208ENST00000464362 MRPL3P09001 348 aaKnown RBP8.72□□□□□ -1.01
HPS4-208ENST00000464362 JUPP14923 745 aa8.72□□□□□ -1.01
HPS4-208ENST00000464362 PTX3P26022 381 aaPredicted RBP8.72□□□□□ -1.01
HPS4-208ENST00000464362 CCR7P32248 378 aa8.72□□□□□ -1.01
HPS4-208ENST00000464362 PIGAP37287 484 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms