RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 RHOXF1Q8NHV9 184 aa16.2■□□□□ 0.18
ACTB-207ENST00000462494 HCAR2Q8TDS4 363 aa16.2■□□□□ 0.18
ACTB-207ENST00000462494 PHF10Q8WUB8 498 aaKnown RBP16.2■□□□□ 0.18
ACTB-207ENST00000462494 SLC6A16Q9GZN6 736 aa16.2■□□□□ 0.18
ACTB-207ENST00000462494 SLIRPQ9GZT3 109 aaKnown RBP16.2■□□□□ 0.18
ACTB-207ENST00000462494 DCSTAMPQ9H295 470 aa16.2■□□□□ 0.18
ACTB-207ENST00000462494 TMEM38AQ9H6F2 299 aa16.2■□□□□ 0.18
ACTB-207ENST00000462494 ITM2CQ9NQX7 267 aa16.2■□□□□ 0.18
ACTB-207ENST00000462494 IMPAD1Q9NX62 359 aa16.2■□□□□ 0.18
ACTB-207ENST00000462494 ASF1AQ9Y294 204 aa16.2■□□□□ 0.18
ACTB-207ENST00000462494 FAM32AQ9Y421 112 aaKnown RBP16.2■□□□□ 0.18
ACTB-207ENST00000462494 CLCA1A8K7I4 914 aa16.19■□□□□ 0.18
ACTB-207ENST00000462494 CYP17A1P05093 508 aa16.19■□□□□ 0.18
ACTB-207ENST00000462494 CISD3P0C7P0 127 aa16.19■□□□□ 0.18
ACTB-207ENST00000462494 ADH5P11766 374 aa16.19■□□□□ 0.18
ACTB-207ENST00000462494 C6P13671 934 aa16.19■□□□□ 0.18
ACTB-207ENST00000462494 CYP4F2P78329 520 aa16.19■□□□□ 0.18
ACTB-207ENST00000462494 OXA1LQ15070 435 aa16.19■□□□□ 0.18
ACTB-207ENST00000462494 ZNF547Q8IVP9 402 aa16.19■□□□□ 0.18
ACTB-207ENST00000462494 GEMIN6Q8WXD5 167 aaKnown RBP16.19■□□□□ 0.18
ACTB-207ENST00000462494 FCGR1BQ92637 280 aa16.19■□□□□ 0.18
ACTB-207ENST00000462494 NXPE3Q969Y0 559 aa16.19■□□□□ 0.18
ACTB-207ENST00000462494 LRRC3BQ96PB8 259 aa16.19■□□□□ 0.18
ACTB-207ENST00000462494 BTBD2Q9BX70 525 aa16.19■□□□□ 0.18
ACTB-207ENST00000462494 MROQ9BYG7 248 aa16.19■□□□□ 0.18
ACTB-207ENST00000462494 M0R082 166 aa16.19■□□□□ 0.18
ACTB-207ENST00000462494 PRNPP04156 253 aa16.19■□□□□ 0.18
ACTB-207ENST00000462494 CDK1P06493 297 aa16.19■□□□□ 0.18
ACTB-207ENST00000462494 STSP08842 583 aa16.19■□□□□ 0.18
ACTB-207ENST00000462494 EPCAMP16422 314 aa16.19■□□□□ 0.18
ACTB-207ENST00000462494 CEBPBP17676 345 aa16.19■□□□□ 0.18
ACTB-207ENST00000462494 DNASE1L3Q13609 305 aa16.19■□□□□ 0.18
ACTB-207ENST00000462494 MAPK11Q15759 364 aa16.19■□□□□ 0.18
ACTB-207ENST00000462494 LRRC26Q2I0M4 334 aa16.19■□□□□ 0.18
ACTB-207ENST00000462494 FNDC3BQ53EP0 1204 aaKnown RBP16.19■□□□□ 0.18
ACTB-207ENST00000462494 C1orf53Q5VUE5 145 aa16.19■□□□□ 0.18
ACTB-207ENST00000462494 TMIGD1Q6UXZ0 262 aa16.19■□□□□ 0.18
ACTB-207ENST00000462494 LRRC56Q8IYG6 542 aaPredicted RBP16.19■□□□□ 0.18
ACTB-207ENST00000462494 STX19Q8N4C7 294 aa16.19■□□□□ 0.18
ACTB-207ENST00000462494 MCFD2Q8NI22 146 aa16.19■□□□□ 0.18
ACTB-207ENST00000462494 ARRDC3Q96B67 414 aa16.19■□□□□ 0.18
ACTB-207ENST00000462494 OTUB2Q96DC9 234 aa16.19■□□□□ 0.18
ACTB-207ENST00000462494 FAM129BQ96TA1 746 aa16.19■□□□□ 0.18
ACTB-207ENST00000462494 NRTNQ99748 197 aa16.19■□□□□ 0.18
ACTB-207ENST00000462494 NEURL2Q9BR09 285 aa16.19■□□□□ 0.18
ACTB-207ENST00000462494 THSD1Q9NS62 852 aa16.19■□□□□ 0.18
ACTB-207ENST00000462494 ZNF226Q9NYT6 803 aa16.19■□□□□ 0.18
ACTB-207ENST00000462494 OSGIN1Q9UJX0 560 aa16.19■□□□□ 0.18
ACTB-207ENST00000462494 DUSP12Q9UNI6 340 aa16.19■□□□□ 0.18
ACTB-207ENST00000462494 ANGPT4Q9Y264 503 aa16.19■□□□□ 0.18
ACTB-207ENST00000462494 KRBA1A5PL33 1030 aa16.18■□□□□ 0.18
ACTB-207ENST00000462494 GADD45GO95257 159 aa16.18■□□□□ 0.18
ACTB-207ENST00000462494 KRT75O95678 551 aa16.18■□□□□ 0.18
ACTB-207ENST00000462494 IFNA14P01570 189 aa16.18■□□□□ 0.18
ACTB-207ENST00000462494 GADD45AP24522 165 aa16.18■□□□□ 0.18
ACTB-207ENST00000462494 PTX3P26022 381 aaPredicted RBP16.18■□□□□ 0.18
ACTB-207ENST00000462494 RPS26P62854 115 aaKnown RBP16.18■□□□□ 0.18
ACTB-207ENST00000462494 EEF1A2Q05639 463 aaKnown RBP16.18■□□□□ 0.18
ACTB-207ENST00000462494 ZNF630Q2M218 657 aaPredicted RBP16.18■□□□□ 0.18
ACTB-207ENST00000462494 PRAMEF14Q5SWL7 426 aa16.18■□□□□ 0.18
ACTB-207ENST00000462494 C10orf62Q5T681 223 aaPredicted RBP16.18■□□□□ 0.18
ACTB-207ENST00000462494 PRAMEF13Q5VWM6 474 aa16.18■□□□□ 0.18
ACTB-207ENST00000462494 LINC00299Q6ZSB3 139 aa16.18■□□□□ 0.18
ACTB-207ENST00000462494 SLC44A2Q8IWA5 706 aaPredicted RBP16.18■□□□□ 0.18
ACTB-207ENST00000462494 OR5AR1Q8NGP9 310 aa16.18■□□□□ 0.18
ACTB-207ENST00000462494 PIP5K1AQ99755 562 aa16.18■□□□□ 0.18
ACTB-207ENST00000462494 ACER3Q9NUN7 267 aa16.18■□□□□ 0.18
ACTB-207ENST00000462494 TAAR2Q9P1P5 351 aa16.18■□□□□ 0.18
ACTB-207ENST00000462494 SLC6A14Q9UN76 642 aa16.18■□□□□ 0.18
ACTB-207ENST00000462494 TMEM98Q9Y2Y6 226 aa16.18■□□□□ 0.18
ACTB-207ENST00000462494 C5orf42Q9H799 3197 aa16.18■□□□□ 0.18
ACTB-207ENST00000462494 NOTCH4Q99466 2003 aa16.18■□□□□ 0.18
ACTB-207ENST00000462494 TRBC2A0A5B9 178 aa16.18■□□□□ 0.18
ACTB-207ENST00000462494 SLC9A3R1O14745 358 aaPredicted RBP16.18■□□□□ 0.18
ACTB-207ENST00000462494 CTSKP43235 329 aa16.18■□□□□ 0.18
ACTB-207ENST00000462494 DGKEP52429 567 aa16.18■□□□□ 0.18
ACTB-207ENST00000462494 TBCEQ15813 527 aaPredicted RBP16.18■□□□□ 0.18
ACTB-207ENST00000462494 CRB2Q5IJ48 1285 aa16.18■□□□□ 0.18
ACTB-207ENST00000462494 FAM83HQ6ZRV2 1179 aaPredicted RBP16.18■□□□□ 0.18
ACTB-207ENST00000462494 CCDC80Q76M96 950 aa16.18■□□□□ 0.18
ACTB-207ENST00000462494 DEPDC4Q8N2C3 294 aa16.18■□□□□ 0.18
ACTB-207ENST00000462494 ST13P5Q8NFI4 369 aaPredicted RBP16.18■□□□□ 0.18
ACTB-207ENST00000462494 ZNF675Q8TD23 568 aa16.18■□□□□ 0.18
ACTB-207ENST00000462494 DACH2Q96NX9 599 aa16.18■□□□□ 0.18
ACTB-207ENST00000462494 ZDHHC5Q9C0B5 715 aa16.18■□□□□ 0.18
ACTB-207ENST00000462494 DSN1Q9H410 356 aa16.18■□□□□ 0.18
ACTB-207ENST00000462494 PLCXD1Q9NUJ7 323 aa16.18■□□□□ 0.18
ACTB-207ENST00000462494 PCYT1BQ9Y5K3 369 aaPredicted RBP16.18■□□□□ 0.18
ACTB-207ENST00000462494 LOC100506127A0A0U1RQW1 187 aa16.17■□□□□ 0.18
ACTB-207ENST00000462494 PRRT4C9JH25 899 aa16.17■□□□□ 0.18
ACTB-207ENST00000462494 RTCAO00442 366 aaKnown RBP16.17■□□□□ 0.18
ACTB-207ENST00000462494 PI15O43692 258 aa16.17■□□□□ 0.18
ACTB-207ENST00000462494 SH3BP5O60239 455 aa16.17■□□□□ 0.18
ACTB-207ENST00000462494 CCNB2O95067 398 aa16.17■□□□□ 0.18
ACTB-207ENST00000462494 HSMCR30P0CW71 290 aa16.17■□□□□ 0.18
ACTB-207ENST00000462494 PIK3CBP42338 1070 aa16.17■□□□□ 0.18
ACTB-207ENST00000462494 XCR1P46094 333 aa16.17■□□□□ 0.18
ACTB-207ENST00000462494 ALDH9A1P49189 494 aa16.17■□□□□ 0.18
ACTB-207ENST00000462494 DSTNP60981 165 aa16.17■□□□□ 0.18
ACTB-207ENST00000462494 HTRA3P83110 453 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms