RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 PCOLCEQ15113 449 aa9.97□□□□□ -0.81
TRAPPC12-213ENST00000461577 NSDHLQ15738 373 aa9.97□□□□□ -0.81
TRAPPC12-213ENST00000461577 UNC50Q53HI1 259 aa9.97□□□□□ -0.81
TRAPPC12-213ENST00000461577 DEPDC1Q5TB30 811 aa9.97□□□□□ -0.81
TRAPPC12-213ENST00000461577 KHDRBS2Q5VWX1 349 aaKnown RBP9.97□□□□□ -0.81
TRAPPC12-213ENST00000461577 QSOX2Q6ZRP7 698 aa9.97□□□□□ -0.81
TRAPPC12-213ENST00000461577 LANCL3Q6ZV70 420 aa9.97□□□□□ -0.81
TRAPPC12-213ENST00000461577 SH2D5Q6ZV89 423 aa9.97□□□□□ -0.81
TRAPPC12-213ENST00000461577 PRICKLE2Q7Z3G6 844 aa9.97□□□□□ -0.81
TRAPPC12-213ENST00000461577 ANKRD37Q7Z713 158 aa9.97□□□□□ -0.81
TRAPPC12-213ENST00000461577 ZNF605Q86T29 641 aa9.97□□□□□ -0.81
TRAPPC12-213ENST00000461577 HPS6Q86YV9 775 aa9.97□□□□□ -0.81
TRAPPC12-213ENST00000461577 RNF175Q8N4F7 328 aa9.97□□□□□ -0.81
TRAPPC12-213ENST00000461577 OR4F6Q8NGB9 312 aa9.97□□□□□ -0.81
TRAPPC12-213ENST00000461577 ADAMTS18Q8TE60 1221 aa9.97□□□□□ -0.81
TRAPPC12-213ENST00000461577 TRPC4APQ8TEL6 797 aa9.97□□□□□ -0.81
TRAPPC12-213ENST00000461577 RGMAQ96B86 450 aa9.97□□□□□ -0.81
TRAPPC12-213ENST00000461577 MTFMTQ96DP5 389 aaKnown RBP9.97□□□□□ -0.81
TRAPPC12-213ENST00000461577 PTCHD1Q96NR3 888 aa9.97□□□□□ -0.81
TRAPPC12-213ENST00000461577 TMEM237Q96Q45 408 aa9.97□□□□□ -0.81
TRAPPC12-213ENST00000461577 SMAD5Q99717 465 aaKnown RBP9.97□□□□□ -0.81
TRAPPC12-213ENST00000461577 MESP1Q9BRJ9 268 aa9.97□□□□□ -0.81
TRAPPC12-213ENST00000461577 TBCDQ9BTW9 1192 aa9.97□□□□□ -0.81
TRAPPC12-213ENST00000461577 TUBB6Q9BUF5 446 aa9.97□□□□□ -0.81
TRAPPC12-213ENST00000461577 LHPPQ9H008 270 aa9.97□□□□□ -0.81
TRAPPC12-213ENST00000461577 ZNF700Q9H0M5 742 aa9.97□□□□□ -0.81
TRAPPC12-213ENST00000461577 ZBTB26Q9HCK0 441 aa9.97□□□□□ -0.81
TRAPPC12-213ENST00000461577 MLXIPLQ9NP71 852 aa9.97□□□□□ -0.81
TRAPPC12-213ENST00000461577 PRDM7Q9NQW5 492 aa9.97□□□□□ -0.81
TRAPPC12-213ENST00000461577 C5AR2Q9P296 337 aa9.97□□□□□ -0.81
TRAPPC12-213ENST00000461577 MID2Q9UJV3 735 aa9.97□□□□□ -0.81
TRAPPC12-213ENST00000461577 ANAPC2Q9UJX6 822 aa9.97□□□□□ -0.81
TRAPPC12-213ENST00000461577 EMCNQ9ULC0 261 aa9.97□□□□□ -0.81
TRAPPC12-213ENST00000461577 MRPS33Q9Y291 106 aaKnown RBP9.97□□□□□ -0.81
TRAPPC12-213ENST00000461577 STK38LQ9Y2H1 464 aa9.97□□□□□ -0.81
TRAPPC12-213ENST00000461577 SPACA6W5XKT8 324 aa9.97□□□□□ -0.81
TRAPPC12-213ENST00000461577 IGHV3-20A0A0C4DH32 117 aa9.96□□□□□ -0.82
TRAPPC12-213ENST00000461577 A0A1W2PQ72 361 aa9.96□□□□□ -0.82
TRAPPC12-213ENST00000461577 FAM227AF5H4B4 570 aa9.96□□□□□ -0.82
TRAPPC12-213ENST00000461577 FOXE1O00358 373 aaPredicted RBP9.96□□□□□ -0.82
TRAPPC12-213ENST00000461577 SAP18O00422 153 aaKnown RBP9.96□□□□□ -0.82
TRAPPC12-213ENST00000461577 RTCAO00442 366 aaKnown RBP9.96□□□□□ -0.82
TRAPPC12-213ENST00000461577 CLDN4O14493 209 aa9.96□□□□□ -0.82
TRAPPC12-213ENST00000461577 SLC28A2O43868 658 aa9.96□□□□□ -0.82
TRAPPC12-213ENST00000461577 SEC24DO94855 1032 aaPredicted RBP9.96□□□□□ -0.82
TRAPPC12-213ENST00000461577 MLYCDO95822 493 aa9.96□□□□□ -0.82
TRAPPC12-213ENST00000461577 PROCP04070 461 aa9.96□□□□□ -0.82
TRAPPC12-213ENST00000461577 ATP5A1P25705 553 aaKnown RBP9.96□□□□□ -0.82
TRAPPC12-213ENST00000461577 LIM2P55344 173 aa9.96□□□□□ -0.82
TRAPPC12-213ENST00000461577 OR4D2P58180 307 aa9.96□□□□□ -0.82
TRAPPC12-213ENST00000461577 BTG2P78543 158 aa9.96□□□□□ -0.82
TRAPPC12-213ENST00000461577 SLC18A2Q05940 514 aa9.96□□□□□ -0.82
TRAPPC12-213ENST00000461577 Q0VFX4 171 aa9.96□□□□□ -0.82
TRAPPC12-213ENST00000461577 TRAF3Q13114 568 aa9.96□□□□□ -0.82
TRAPPC12-213ENST00000461577 GGTA1PQ4G0N0 100 aa9.96□□□□□ -0.82
TRAPPC12-213ENST00000461577 SFT2D3Q587I9 215 aa9.96□□□□□ -0.82
TRAPPC12-213ENST00000461577 C10orf62Q5T681 223 aaPredicted RBP9.96□□□□□ -0.82
TRAPPC12-213ENST00000461577 AGAP7PQ5VUJ5 663 aa9.96□□□□□ -0.82
TRAPPC12-213ENST00000461577 FRG2Q64ET8 278 aa9.96□□□□□ -0.82
TRAPPC12-213ENST00000461577 OR4C11Q6IEV9 310 aa9.96□□□□□ -0.82
TRAPPC12-213ENST00000461577 ZYG11AQ6WRX3 759 aa9.96□□□□□ -0.82
TRAPPC12-213ENST00000461577 UBE3DQ7Z6J8 389 aa9.96□□□□□ -0.82
TRAPPC12-213ENST00000461577 TRABD2AQ86V40 505 aa9.96□□□□□ -0.82
TRAPPC12-213ENST00000461577 SRRM1Q8IYB3 904 aaKnown RBP9.96□□□□□ -0.82
TRAPPC12-213ENST00000461577 CCNYL1Q8N7R7 359 aa9.96□□□□□ -0.82
TRAPPC12-213ENST00000461577 ACOT4Q8N9L9 421 aa9.96□□□□□ -0.82
TRAPPC12-213ENST00000461577 FAM47BQ8NA70 645 aa9.96□□□□□ -0.82
TRAPPC12-213ENST00000461577 WDR20Q8TBZ3 569 aa9.96□□□□□ -0.82
TRAPPC12-213ENST00000461577 RDH11Q8TC12 318 aa9.96□□□□□ -0.82
TRAPPC12-213ENST00000461577 TM9SF4Q92544 642 aa9.96□□□□□ -0.82
TRAPPC12-213ENST00000461577 TSLPQ969D9 159 aa9.96□□□□□ -0.82
TRAPPC12-213ENST00000461577 L3HYPDHQ96EM0 354 aa9.96□□□□□ -0.82
TRAPPC12-213ENST00000461577 AGAP4Q96P64 663 aa9.96□□□□□ -0.82
TRAPPC12-213ENST00000461577 FRG2BQ96QU4 278 aa9.96□□□□□ -0.82
TRAPPC12-213ENST00000461577 SERPINI1Q99574 410 aa9.96□□□□□ -0.82
TRAPPC12-213ENST00000461577 ELOVL6Q9H5J4 265 aa9.96□□□□□ -0.82
TRAPPC12-213ENST00000461577 ZNF552Q9H707 407 aaPredicted RBP9.96□□□□□ -0.82
TRAPPC12-213ENST00000461577 LYRM4Q9HD34 91 aa9.96□□□□□ -0.82
TRAPPC12-213ENST00000461577 PRDM9Q9NQV7 894 aa9.96□□□□□ -0.82
TRAPPC12-213ENST00000461577 PRTFDC1Q9NRG1 225 aa9.96□□□□□ -0.82
TRAPPC12-213ENST00000461577 PSD3Q9NYI0 1048 aa9.96□□□□□ -0.82
TRAPPC12-213ENST00000461577 TRPS1Q9UHF7 1281 aa9.96□□□□□ -0.82
TRAPPC12-213ENST00000461577 LGALS13Q9UHV8 139 aa9.96□□□□□ -0.82
TRAPPC12-213ENST00000461577 DAPP1Q9UN19 280 aa9.96□□□□□ -0.82
TRAPPC12-213ENST00000461577 SNX6Q9UNH7 406 aa9.96□□□□□ -0.82
TRAPPC12-213ENST00000461577 MMACHCQ9Y4U1 282 aa9.96□□□□□ -0.82
TRAPPC12-213ENST00000461577 DOCK10Q96BY6 2186 aa9.96□□□□□ -0.82
TRAPPC12-213ENST00000461577 BSNQ9UPA5 3926 aa9.96□□□□□ -0.82
TRAPPC12-213ENST00000461577 COL6A6A6NMZ7 2263 aa9.95□□□□□ -0.82
TRAPPC12-213ENST00000461577 G3V2L1 256 aa9.95□□□□□ -0.82
TRAPPC12-213ENST00000461577 PLPP1O14494 284 aa9.95□□□□□ -0.82
TRAPPC12-213ENST00000461577 PLIN3O60664 434 aa9.95□□□□□ -0.82
TRAPPC12-213ENST00000461577 ERLIN1O75477 346 aa9.95□□□□□ -0.82
TRAPPC12-213ENST00000461577 OR4F21O95013 312 aa9.95□□□□□ -0.82
TRAPPC12-213ENST00000461577 SERPINA7P05543 415 aa9.95□□□□□ -0.82
TRAPPC12-213ENST00000461577 PRR35P0CG20 571 aa9.95□□□□□ -0.82
TRAPPC12-213ENST00000461577 CPA3P15088 417 aa9.95□□□□□ -0.82
TRAPPC12-213ENST00000461577 MAOAP21397 527 aa9.95□□□□□ -0.82
TRAPPC12-213ENST00000461577 HIST1H1TP22492 207 aaPredicted RBP9.95□□□□□ -0.82
TRAPPC12-213ENST00000461577 HMOX2P30519 316 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms