RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 KCMF1Q9P0J7 381 aa16.03■□□□□ 0.16
TOP3A-202ENST00000461127 MTRF1LQ9UGC7 380 aaKnown RBP16.03■□□□□ 0.16
TOP3A-202ENST00000461127 FBXW2Q9UKT8 454 aa16.03■□□□□ 0.16
TOP3A-202ENST00000461127 ACAD8Q9UKU7 415 aa16.03■□□□□ 0.16
TOP3A-202ENST00000461127 FAM215AQ9Y5M1 114 aa16.03■□□□□ 0.16
TOP3A-202ENST00000461127 A8MVJ9 347 aa16.02■□□□□ 0.16
TOP3A-202ENST00000461127 SYT5O00445 386 aa16.02■□□□□ 0.16
TOP3A-202ENST00000461127 ZBTB14O43829 449 aa16.02■□□□□ 0.16
TOP3A-202ENST00000461127 TPSB2P20231 275 aa16.02■□□□□ 0.16
TOP3A-202ENST00000461127 ADH7P40394 386 aa16.02■□□□□ 0.16
TOP3A-202ENST00000461127 SSR4P51571 173 aa16.02■□□□□ 0.16
TOP3A-202ENST00000461127 NR0B1P51843 470 aaKnown RBP16.02■□□□□ 0.16
TOP3A-202ENST00000461127 VSNL1P62760 191 aa16.02■□□□□ 0.16
TOP3A-202ENST00000461127 KCNJ11Q14654 390 aa16.02■□□□□ 0.16
TOP3A-202ENST00000461127 TPSAB1Q15661 275 aa16.02■□□□□ 0.16
TOP3A-202ENST00000461127 TTLL9Q3SXZ7 439 aa16.02■□□□□ 0.16
TOP3A-202ENST00000461127 C1orf185Q5T7R7 199 aa16.02■□□□□ 0.16
TOP3A-202ENST00000461127 WLSQ5T9L3 541 aa16.02■□□□□ 0.16
TOP3A-202ENST00000461127 NDUFAF5Q5TEU4 345 aa16.02■□□□□ 0.16
TOP3A-202ENST00000461127 SHEQ5VZ18 495 aa16.02■□□□□ 0.16
TOP3A-202ENST00000461127 KIAA0408Q6ZU52 694 aa16.02■□□□□ 0.16
TOP3A-202ENST00000461127 CHSY3Q70JA7 882 aa16.02■□□□□ 0.16
TOP3A-202ENST00000461127 CCDC138Q96M89 665 aa16.02■□□□□ 0.16
TOP3A-202ENST00000461127 EIF2B3Q9NR50 452 aaKnown RBP16.02■□□□□ 0.16
TOP3A-202ENST00000461127 HPF1Q9NWY4 346 aa16.02■□□□□ 0.16
TOP3A-202ENST00000461127 CBLCQ9ULV8 474 aa16.02■□□□□ 0.16
TOP3A-202ENST00000461127 NFU1Q9UMS0 254 aa16.02■□□□□ 0.16
TOP3A-202ENST00000461127 MPDZO75970 2070 aa16.02■□□□□ 0.15
TOP3A-202ENST00000461127 CHST10O43529 356 aa16.01■□□□□ 0.15
TOP3A-202ENST00000461127 LY6G6DO95868 133 aa16.01■□□□□ 0.15
TOP3A-202ENST00000461127 MAGEA6P43360 314 aa16.01■□□□□ 0.15
TOP3A-202ENST00000461127 ADARP55265 1226 aaKnown RBP16.01■□□□□ 0.15
TOP3A-202ENST00000461127 CDK16Q00536 496 aa16.01■□□□□ 0.15
TOP3A-202ENST00000461127 DAZAP2Q15038 168 aaPredicted RBP16.01■□□□□ 0.15
TOP3A-202ENST00000461127 RIPPLY2Q5TAB7 128 aa16.01■□□□□ 0.15
TOP3A-202ENST00000461127 ANKRD22Q5VYY1 191 aa16.01■□□□□ 0.15
TOP3A-202ENST00000461127 RTL6Q6ICC9 239 aa16.01■□□□□ 0.15
TOP3A-202ENST00000461127 GK5Q6ZS86 529 aa16.01■□□□□ 0.15
TOP3A-202ENST00000461127 GPALPP1Q8IXQ4 340 aa16.01■□□□□ 0.15
TOP3A-202ENST00000461127 LRRC56Q8IYG6 542 aaPredicted RBP16.01■□□□□ 0.15
TOP3A-202ENST00000461127 NAT8LQ8N9F0 302 aa16.01■□□□□ 0.15
TOP3A-202ENST00000461127 EIF1ADQ8N9N8 165 aaKnown RBP16.01■□□□□ 0.15
TOP3A-202ENST00000461127 NFAM1Q8NET5 270 aaPredicted RBP16.01■□□□□ 0.15
TOP3A-202ENST00000461127 B3GNT7Q8NFL0 401 aa16.01■□□□□ 0.15
TOP3A-202ENST00000461127 OR2M7Q8NG81 312 aa16.01■□□□□ 0.15
TOP3A-202ENST00000461127 LPGAT1Q92604 370 aa16.01■□□□□ 0.15
TOP3A-202ENST00000461127 SARAFQ96BY9 339 aa16.01■□□□□ 0.15
TOP3A-202ENST00000461127 TCF12Q99081 682 aa16.01■□□□□ 0.15
TOP3A-202ENST00000461127 CCDC77Q9BR77 488 aa16.01■□□□□ 0.15
TOP3A-202ENST00000461127 TTTY12Q9BZ98 90 aa16.01■□□□□ 0.15
TOP3A-202ENST00000461127 DEPPQ9NTK1 212 aa16.01■□□□□ 0.15
TOP3A-202ENST00000461127 ALKBH4Q9NXW9 302 aa16.01■□□□□ 0.15
TOP3A-202ENST00000461127 YARS2Q9Y2Z4 477 aaKnown RBP16.01■□□□□ 0.15
TOP3A-202ENST00000461127 STAB1Q9NY15 2570 aa16.01■□□□□ 0.15
TOP3A-202ENST00000461127 HIVEP2P31629 2446 aa16■□□□□ 0.15
TOP3A-202ENST00000461127 TCRBV16S1A1N1A0A5B0 115 aa16■□□□□ 0.15
TOP3A-202ENST00000461127 A8MUA0 341 aa16■□□□□ 0.15
TOP3A-202ENST00000461127 GOLGA8MH3BSY2 632 aa16■□□□□ 0.15
TOP3A-202ENST00000461127 PSMD12O00232 456 aaPredicted RBP16■□□□□ 0.15
TOP3A-202ENST00000461127 SLC16A5O15375 505 aa16■□□□□ 0.15
TOP3A-202ENST00000461127 ARHGEF9O43307 516 aa16■□□□□ 0.15
TOP3A-202ENST00000461127 GALR3O60755 368 aaPredicted RBP16■□□□□ 0.15
TOP3A-202ENST00000461127 IGHG3P01860 377 aa16■□□□□ 0.15
TOP3A-202ENST00000461127 GABRA1P14867 456 aa16■□□□□ 0.15
TOP3A-202ENST00000461127 PCSK6P29122 969 aa16■□□□□ 0.15
TOP3A-202ENST00000461127 DCAF7P61962 342 aa16■□□□□ 0.15
TOP3A-202ENST00000461127 NKX6-1P78426 367 aaPredicted RBP16■□□□□ 0.15
TOP3A-202ENST00000461127 PCBP2Q15366 365 aaKnown RBP eCLIP16■□□□□ 0.15
TOP3A-202ENST00000461127 DEFB134Q4QY38 66 aa16■□□□□ 0.15
TOP3A-202ENST00000461127 ZDHHC24Q6UX98 284 aa16■□□□□ 0.15
TOP3A-202ENST00000461127 TRILQ7L0X0 811 aa16■□□□□ 0.15
TOP3A-202ENST00000461127 C17orf64Q86WR6 236 aa16■□□□□ 0.15
TOP3A-202ENST00000461127 FAM109AQ8N4B1 249 aa16■□□□□ 0.15
TOP3A-202ENST00000461127 APCDD1LQ8NCL9 501 aa16■□□□□ 0.15
TOP3A-202ENST00000461127 FBXO25Q8TCJ0 367 aa16■□□□□ 0.15
TOP3A-202ENST00000461127 ASB15Q8WXK1 588 aa16■□□□□ 0.15
TOP3A-202ENST00000461127 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16■□□□□ 0.15
TOP3A-202ENST00000461127 LDAHQ9H6V9 325 aa16■□□□□ 0.15
TOP3A-202ENST00000461127 PRDM9Q9NQV7 894 aa16■□□□□ 0.15
TOP3A-202ENST00000461127 TREX1Q9NSU2 369 aa16■□□□□ 0.15
TOP3A-202ENST00000461127 BEX4Q9NWD9 120 aaPredicted RBP16■□□□□ 0.15
TOP3A-202ENST00000461127 SAMD15Q9P1V8 674 aa16■□□□□ 0.15
TOP3A-202ENST00000461127 FOXD3Q9UJU5 478 aaPredicted RBP16■□□□□ 0.15
TOP3A-202ENST00000461127 CRYL1Q9Y2S2 319 aa16■□□□□ 0.15
TOP3A-202ENST00000461127 ATRQ13535 2644 aa15.99■□□□□ 0.15
TOP3A-202ENST00000461127 TLN2Q9Y4G6 2542 aa15.99■□□□□ 0.15
TOP3A-202ENST00000461127 A0A1B0GVC2 190 aa15.99■□□□□ 0.15
TOP3A-202ENST00000461127 TCRBV7S3A2A0A539 114 aa15.99■□□□□ 0.15
TOP3A-202ENST00000461127 HSPB2A8KAH6 182 aa15.99■□□□□ 0.15
TOP3A-202ENST00000461127 AQP7O14520 342 aa15.99■□□□□ 0.15
TOP3A-202ENST00000461127 DVL2O14641 736 aa15.99■□□□□ 0.15
TOP3A-202ENST00000461127 NDUFS4O43181 175 aa15.99■□□□□ 0.15
TOP3A-202ENST00000461127 SUSD5O60279 629 aa15.99■□□□□ 0.15
TOP3A-202ENST00000461127 ERLIN1O75477 346 aa15.99■□□□□ 0.15
TOP3A-202ENST00000461127 ALOX12P18054 663 aa15.99■□□□□ 0.15
TOP3A-202ENST00000461127 MAOAP21397 527 aa15.99■□□□□ 0.15
TOP3A-202ENST00000461127 IMPA1P29218 277 aa15.99■□□□□ 0.15
TOP3A-202ENST00000461127 SKIV2L2P42285 1042 aaKnown RBP15.99■□□□□ 0.15
TOP3A-202ENST00000461127 MAN2A2P49641 1150 aa15.99■□□□□ 0.15
TOP3A-202ENST00000461127 ASCL1P50553 236 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms