RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 ARMCX6Q7L4S7 300 aa8.53□□□□□ -1.04
VPS50-207ENST00000458530 PAQR7Q86WK9 346 aa8.53□□□□□ -1.04
VPS50-207ENST00000458530 RIMKLAQ8IXN7 391 aa8.53□□□□□ -1.04
VPS50-207ENST00000458530 ZNF511Q8NB15 262 aa8.53□□□□□ -1.04
VPS50-207ENST00000458530 ZNF740Q8NDX6 193 aa8.53□□□□□ -1.04
VPS50-207ENST00000458530 OR8J2Q8NGG1 315 aa8.53□□□□□ -1.04
VPS50-207ENST00000458530 CLHC1Q8NHS4 586 aa8.53□□□□□ -1.04
VPS50-207ENST00000458530 POP5Q969H6 163 aaKnown RBP8.53□□□□□ -1.04
VPS50-207ENST00000458530 RERGQ96A58 199 aaPredicted RBP8.53□□□□□ -1.04
VPS50-207ENST00000458530 VPS33AQ96AX1 596 aa8.53□□□□□ -1.04
VPS50-207ENST00000458530 ASB9Q96DX5 294 aa8.53□□□□□ -1.04
VPS50-207ENST00000458530 TEX37Q96LM6 180 aa8.53□□□□□ -1.04
VPS50-207ENST00000458530 KCNC2Q96PR1 638 aa8.53□□□□□ -1.04
VPS50-207ENST00000458530 OR2A14Q96R47 310 aa8.53□□□□□ -1.04
VPS50-207ENST00000458530 GPATCH1Q9BRR8 931 aaKnown RBP8.53□□□□□ -1.04
VPS50-207ENST00000458530 FAIM2Q9BWQ8 316 aa8.53□□□□□ -1.04
VPS50-207ENST00000458530 BHLHE41Q9C0J9 482 aaPredicted RBP8.53□□□□□ -1.04
VPS50-207ENST00000458530 TWSG1Q9GZX9 223 aa8.53□□□□□ -1.04
VPS50-207ENST00000458530 SPNS1Q9H2V7 528 aa8.53□□□□□ -1.04
VPS50-207ENST00000458530 OR51B5Q9H339 312 aa8.53□□□□□ -1.04
VPS50-207ENST00000458530 DENND2DQ9H6A0 471 aaPredicted RBP8.53□□□□□ -1.04
VPS50-207ENST00000458530 REEP4Q9H6H4 257 aa8.53□□□□□ -1.04
VPS50-207ENST00000458530 COPS7BQ9H9Q2 264 aaPredicted RBP8.53□□□□□ -1.04
VPS50-207ENST00000458530 SLC52A3Q9NQ40 469 aa8.53□□□□□ -1.04
VPS50-207ENST00000458530 MIEF1Q9NQG6 463 aa8.53□□□□□ -1.04
VPS50-207ENST00000458530 HRASLS2Q9NWW9 162 aa8.53□□□□□ -1.04
VPS50-207ENST00000458530 SPHK1Q9NYA1 384 aa8.53□□□□□ -1.04
VPS50-207ENST00000458530 TMEM181Q9P2C4 612 aa8.53□□□□□ -1.04
VPS50-207ENST00000458530 ABCD2Q9UBJ2 740 aa8.53□□□□□ -1.04
VPS50-207ENST00000458530 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.53□□□□□ -1.04
VPS50-207ENST00000458530 CORO2BQ9UQ03 480 aa8.53□□□□□ -1.04
VPS50-207ENST00000458530 MAN2B2Q9Y2E5 1009 aa8.53□□□□□ -1.04
VPS50-207ENST00000458530 PTPRBP23467 1997 aa8.52□□□□□ -1.05
VPS50-207ENST00000458530 FEZF1A0PJY2 475 aa8.52□□□□□ -1.05
VPS50-207ENST00000458530 OR2A25A4D2G3 310 aa8.52□□□□□ -1.05
VPS50-207ENST00000458530 RHPN2P1A8MT19 583 aa8.52□□□□□ -1.05
VPS50-207ENST00000458530 C9JVG2 144 aa8.52□□□□□ -1.05
VPS50-207ENST00000458530 BTN3A3O00478 584 aa8.52□□□□□ -1.05
VPS50-207ENST00000458530 TXNDC9O14530 226 aa8.52□□□□□ -1.05
VPS50-207ENST00000458530 RFXANKO14593 260 aa8.52□□□□□ -1.05
VPS50-207ENST00000458530 NVLO15381 856 aaKnown RBP8.52□□□□□ -1.05
VPS50-207ENST00000458530 UBXN7O94888 489 aa8.52□□□□□ -1.05
VPS50-207ENST00000458530 ETHE1O95571 254 aa8.52□□□□□ -1.05
VPS50-207ENST00000458530 CELA2BP08218 269 aaPredicted RBP8.52□□□□□ -1.05
VPS50-207ENST00000458530 HSD17B1P14061 328 aa8.52□□□□□ -1.05
VPS50-207ENST00000458530 BCL6P41182 706 aa8.52□□□□□ -1.05
VPS50-207ENST00000458530 GRIA3P42263 894 aa8.52□□□□□ -1.05
VPS50-207ENST00000458530 CTSKP43235 329 aa8.52□□□□□ -1.05
VPS50-207ENST00000458530 SSR2P43308 183 aa8.52□□□□□ -1.05
VPS50-207ENST00000458530 PPM1FP49593 454 aaPredicted RBP8.52□□□□□ -1.05
VPS50-207ENST00000458530 CSNK1EP49674 416 aaKnown RBP8.52□□□□□ -1.05
VPS50-207ENST00000458530 SMCPP49901 116 aaPredicted RBP8.52□□□□□ -1.05
VPS50-207ENST00000458530 DGKQP52824 942 aa8.52□□□□□ -1.05
VPS50-207ENST00000458530 SKP1P63208 163 aa8.52□□□□□ -1.05
VPS50-207ENST00000458530 HKDC1Q2TB90 917 aa8.52□□□□□ -1.05
VPS50-207ENST00000458530 PGS1Q32NB8 556 aa8.52□□□□□ -1.05
VPS50-207ENST00000458530 C14orf28Q4W4Y0 310 aa8.52□□□□□ -1.05
VPS50-207ENST00000458530 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.52□□□□□ -1.05
VPS50-207ENST00000458530 KIAA1614Q5VZ46 1190 aa8.52□□□□□ -1.05
VPS50-207ENST00000458530 ZFP1Q6P2D0 407 aa8.52□□□□□ -1.05
VPS50-207ENST00000458530 FIGLAQ6QHK4 219 aa8.52□□□□□ -1.05
VPS50-207ENST00000458530 TMPRSS7Q7RTY8 843 aa8.52□□□□□ -1.05
VPS50-207ENST00000458530 VN1R5Q7Z5H4 357 aa8.52□□□□□ -1.05
VPS50-207ENST00000458530 ASPGQ86U10 573 aa8.52□□□□□ -1.05
VPS50-207ENST00000458530 SLCO6A1Q86UG4 719 aa8.52□□□□□ -1.05
VPS50-207ENST00000458530 HPS6Q86YV9 775 aa8.52□□□□□ -1.05
VPS50-207ENST00000458530 CARFQ8N187 725 aa8.52□□□□□ -1.05
VPS50-207ENST00000458530 RNF175Q8N4F7 328 aa8.52□□□□□ -1.05
VPS50-207ENST00000458530 KRTCAP2Q8N6L1 136 aa8.52□□□□□ -1.05
VPS50-207ENST00000458530 TRIML2Q8N7C3 387 aa8.52□□□□□ -1.05
VPS50-207ENST00000458530 ANKRD53Q8N9V6 530 aa8.52□□□□□ -1.05
VPS50-207ENST00000458530 CAMKVQ8NCB2 501 aa8.52□□□□□ -1.05
VPS50-207ENST00000458530 BAHD1Q8TBE0 780 aaPredicted RBP8.52□□□□□ -1.05
VPS50-207ENST00000458530 NT5CQ8TCD5 201 aa8.52□□□□□ -1.05
VPS50-207ENST00000458530 RSC1A1Q92681 617 aa8.52□□□□□ -1.05
VPS50-207ENST00000458530 GAL3ST3Q96A11 431 aa8.52□□□□□ -1.05
VPS50-207ENST00000458530 PPCDCQ96CD2 204 aa8.52□□□□□ -1.05
VPS50-207ENST00000458530 ZNF764Q96H86 408 aaPredicted RBP8.52□□□□□ -1.05
VPS50-207ENST00000458530 CLPTM1LQ96KA5 538 aa8.52□□□□□ -1.05
VPS50-207ENST00000458530 LRGUKQ96M69 825 aa8.52□□□□□ -1.05
VPS50-207ENST00000458530 TMEM74Q96NL1 305 aa8.52□□□□□ -1.05
VPS50-207ENST00000458530 GBP5Q96PP8 586 aa8.52□□□□□ -1.05
VPS50-207ENST00000458530 CD180Q99467 661 aa8.52□□□□□ -1.05
VPS50-207ENST00000458530 SLC38A3Q99624 504 aa8.52□□□□□ -1.05
VPS50-207ENST00000458530 CGREF1Q99674 301 aa8.52□□□□□ -1.05
VPS50-207ENST00000458530 ZFYVE21Q9BQ24 234 aa8.52□□□□□ -1.05
VPS50-207ENST00000458530 TBCDQ9BTW9 1192 aa8.52□□□□□ -1.05
VPS50-207ENST00000458530 DUSP26Q9BV47 211 aa8.52□□□□□ -1.05
VPS50-207ENST00000458530 DUSP23Q9BVJ7 150 aa8.52□□□□□ -1.05
VPS50-207ENST00000458530 REXO4Q9GZR2 422 aaKnown RBP8.52□□□□□ -1.05
VPS50-207ENST00000458530 ABCG4Q9H172 646 aa8.52□□□□□ -1.05
VPS50-207ENST00000458530 RNPEPL1Q9HAU8 725 aa8.52□□□□□ -1.05
VPS50-207ENST00000458530 IL1RL2Q9HB29 575 aa8.52□□□□□ -1.05
VPS50-207ENST00000458530 FSCN3Q9NQT6 498 aa8.52□□□□□ -1.05
VPS50-207ENST00000458530 LYARQ9NX58 379 aaKnown RBP8.52□□□□□ -1.05
VPS50-207ENST00000458530 ATP6V1HQ9UI12 483 aa8.52□□□□□ -1.05
VPS50-207ENST00000458530 BTNL2Q9UIR0 455 aa8.52□□□□□ -1.05
VPS50-207ENST00000458530 POMT2Q9UKY4 750 aa8.52□□□□□ -1.05
VPS50-207ENST00000458530 PCDHGB4Q9UN71 923 aa8.52□□□□□ -1.05
VPS50-207ENST00000458530 POMPQ9Y244 141 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms