RNA–Protein interactions for RNA: ENST00000456331.6

PPP1R9A-208, Transcript of protein phosphatase 1 regulatory subunit 9A, humanhuman

TSL 1 (best) BASIC

Gene PPP1R9A, Length 10,090 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R9A-208ENST00000456331 A0A1W2PQH9 124 aa3.89□□□□□ -1.79
PPP1R9A-208ENST00000456331 CASC3O15234 703 aaKnown RBP3.89□□□□□ -1.79
PPP1R9A-208ENST00000456331 SSX4O60224 188 aa3.89□□□□□ -1.79
PPP1R9A-208ENST00000456331 SC5DO75845 299 aa3.89□□□□□ -1.79
PPP1R9A-208ENST00000456331 CXCL14O95715 111 aa3.89□□□□□ -1.79
PPP1R9A-208ENST00000456331 ADAP00813 363 aa3.89□□□□□ -1.79
PPP1R9A-208ENST00000456331 UCHL1P09936 223 aa3.89□□□□□ -1.79
PPP1R9A-208ENST00000456331 HNRNPFP52597 415 aaKnown RBP3.89□□□□□ -1.79
PPP1R9A-208ENST00000456331 ARSFP54793 590 aa3.89□□□□□ -1.79
PPP1R9A-208ENST00000456331 RPS3AP61247 264 aaKnown RBP3.89□□□□□ -1.79
PPP1R9A-208ENST00000456331 TAF10Q12962 218 aa3.89□□□□□ -1.79
PPP1R9A-208ENST00000456331 ITPK1Q13572 414 aa3.89□□□□□ -1.79
PPP1R9A-208ENST00000456331 KDELC1Q6UW63 502 aa3.89□□□□□ -1.79
PPP1R9A-208ENST00000456331 GALNT5Q7Z7M9 940 aa3.89□□□□□ -1.79
PPP1R9A-208ENST00000456331 TREML1Q86YW5 311 aa3.89□□□□□ -1.79
PPP1R9A-208ENST00000456331 CMTM1Q8IZ96 169 aa3.89□□□□□ -1.79
PPP1R9A-208ENST00000456331 TRAM1L1Q8N609 369 aa3.89□□□□□ -1.79
PPP1R9A-208ENST00000456331 MSI2Q96DH6 328 aaKnown RBP3.89□□□□□ -1.79
PPP1R9A-208ENST00000456331 ZBED3Q96IU2 234 aaPredicted RBP3.89□□□□□ -1.79
PPP1R9A-208ENST00000456331 ARL5BQ96KC2 179 aa3.89□□□□□ -1.79
PPP1R9A-208ENST00000456331 GAS2L1Q99501 681 aaPredicted RBP3.89□□□□□ -1.79
PPP1R9A-208ENST00000456331 MECRQ9BV79 373 aa3.89□□□□□ -1.79
PPP1R9A-208ENST00000456331 REEP4Q9H6H4 257 aa3.89□□□□□ -1.79
PPP1R9A-208ENST00000456331 WDR55Q9H6Y2 383 aaPredicted RBP3.89□□□□□ -1.79
PPP1R9A-208ENST00000456331 WDR26Q9H7D7 661 aa3.89□□□□□ -1.79
PPP1R9A-208ENST00000456331 CHRAC1Q9NRG0 131 aa3.89□□□□□ -1.79
PPP1R9A-208ENST00000456331 ZDHHC18Q9NUE0 388 aa3.89□□□□□ -1.79
PPP1R9A-208ENST00000456331 TVP23BQ9NYZ1 205 aa3.89□□□□□ -1.79
PPP1R9A-208ENST00000456331 SLC6A14Q9UN76 642 aa3.89□□□□□ -1.79
PPP1R9A-208ENST00000456331 U3KQV3 271 aa3.89□□□□□ -1.79
PPP1R9A-208ENST00000456331 TRIOBPQ9H2D6 2365 aa3.89□□□□□ -1.79
PPP1R9A-208ENST00000456331 CDC7O00311 574 aa3.89□□□□□ -1.79
PPP1R9A-208ENST00000456331 ZBTB22O15209 634 aa3.89□□□□□ -1.79
PPP1R9A-208ENST00000456331 TPD52L2O43399 206 aaKnown RBP3.89□□□□□ -1.79
PPP1R9A-208ENST00000456331 GPR137BO60478 399 aa3.89□□□□□ -1.79
PPP1R9A-208ENST00000456331 KCNK5O95279 499 aa3.89□□□□□ -1.79
PPP1R9A-208ENST00000456331 CHRNA1P02708 482 aa3.89□□□□□ -1.79
PPP1R9A-208ENST00000456331 H2AFB2P0C5Z0 115 aa3.89□□□□□ -1.79
PPP1R9A-208ENST00000456331 KCNE1P15382 129 aa3.89□□□□□ -1.79
PPP1R9A-208ENST00000456331 EN1Q05925 392 aaPredicted RBP3.89□□□□□ -1.79
PPP1R9A-208ENST00000456331 CXCL9Q07325 125 aa3.89□□□□□ -1.79
PPP1R9A-208ENST00000456331 CHRFAM7AQ494W8 412 aa3.89□□□□□ -1.79
PPP1R9A-208ENST00000456331 NADK2Q4G0N4 442 aa3.89□□□□□ -1.79
PPP1R9A-208ENST00000456331 FAM117BQ6P1L5 589 aa3.89□□□□□ -1.79
PPP1R9A-208ENST00000456331 TPRG1Q6ZUI0 275 aa3.89□□□□□ -1.79
PPP1R9A-208ENST00000456331 MARCH9Q86YJ5 346 aa3.89□□□□□ -1.79
PPP1R9A-208ENST00000456331 C4orf32Q8N8J7 132 aa3.89□□□□□ -1.79
PPP1R9A-208ENST00000456331 DNAAF1Q8NEP3 725 aa3.89□□□□□ -1.79
PPP1R9A-208ENST00000456331 OR6K6Q8NGW6 343 aa3.89□□□□□ -1.79
PPP1R9A-208ENST00000456331 TRAPPC12Q8WVT3 735 aa3.89□□□□□ -1.79
PPP1R9A-208ENST00000456331 JPH3Q8WXH2 748 aaPredicted RBP3.89□□□□□ -1.79
PPP1R9A-208ENST00000456331 RSC1A1Q92681 617 aa3.89□□□□□ -1.79
PPP1R9A-208ENST00000456331 SLAMF9Q96A28 289 aa3.89□□□□□ -1.79
PPP1R9A-208ENST00000456331 SLC5A7Q9GZV3 580 aa3.89□□□□□ -1.79
PPP1R9A-208ENST00000456331 SLC25A31Q9H0C2 315 aa3.89□□□□□ -1.79
PPP1R9A-208ENST00000456331 SUV39H2Q9H5I1 410 aa3.89□□□□□ -1.79
PPP1R9A-208ENST00000456331 MEAF6Q9HAF1 191 aa3.89□□□□□ -1.79
PPP1R9A-208ENST00000456331 EPHA6Q9UF33 1036 aa3.89□□□□□ -1.79
PPP1R9A-208ENST00000456331 TMEM98Q9Y2Y6 226 aa3.89□□□□□ -1.79
PPP1R9A-208ENST00000456331 PEX10O60683 326 aa3.89□□□□□ -1.79
PPP1R9A-208ENST00000456331 GSRP00390 522 aa3.89□□□□□ -1.79
PPP1R9A-208ENST00000456331 PAHP00439 452 aa3.89□□□□□ -1.79
PPP1R9A-208ENST00000456331 CD3GP09693 182 aa3.89□□□□□ -1.79
PPP1R9A-208ENST00000456331 CHRNB2P17787 502 aa3.89□□□□□ -1.79
PPP1R9A-208ENST00000456331 WEE1P30291 646 aa3.89□□□□□ -1.79
PPP1R9A-208ENST00000456331 LILRA4P59901 499 aa3.89□□□□□ -1.79
PPP1R9A-208ENST00000456331 TRA2BP62995 288 aaKnown RBP3.89□□□□□ -1.79
PPP1R9A-208ENST00000456331 RPA4Q13156 261 aa3.89□□□□□ -1.79
PPP1R9A-208ENST00000456331 RBM39Q14498 530 aaKnown RBP3.89□□□□□ -1.79
PPP1R9A-208ENST00000456331 ACSBG2Q5FVE4 666 aa3.89□□□□□ -1.79
PPP1R9A-208ENST00000456331 UBXN11Q5T124 520 aa3.89□□□□□ -1.79
PPP1R9A-208ENST00000456331 TTLL10Q6ZVT0 673 aa3.89□□□□□ -1.79
PPP1R9A-208ENST00000456331 CMC1Q7Z7K0 106 aa3.89□□□□□ -1.79
PPP1R9A-208ENST00000456331 DCAF4L2Q8NA75 395 aa3.89□□□□□ -1.79
PPP1R9A-208ENST00000456331 OR9A1PQ8NGU1 263 aa3.89□□□□□ -1.79
PPP1R9A-208ENST00000456331 ISOC1Q96CN7 298 aa3.89□□□□□ -1.79
PPP1R9A-208ENST00000456331 P2RX7Q99572 595 aaKnown RBP3.89□□□□□ -1.79
PPP1R9A-208ENST00000456331 TSNAXQ99598 290 aaKnown RBP3.89□□□□□ -1.79
PPP1R9A-208ENST00000456331 SMAD5Q99717 465 aaKnown RBP3.89□□□□□ -1.79
PPP1R9A-208ENST00000456331 PRRT1Q99946 306 aa3.89□□□□□ -1.79
PPP1R9A-208ENST00000456331 NUDT9Q9BW91 350 aa3.89□□□□□ -1.79
PPP1R9A-208ENST00000456331 CEP41Q9BYV8 373 aa3.89□□□□□ -1.79
PPP1R9A-208ENST00000456331 ZNF700Q9H0M5 742 aa3.89□□□□□ -1.79
PPP1R9A-208ENST00000456331 NLE1Q9NVX2 485 aaPredicted RBP3.89□□□□□ -1.79
PPP1R9A-208ENST00000456331 TMEM248Q9NWD8 314 aa3.89□□□□□ -1.79
PPP1R9A-208ENST00000456331 SMPD4Q9NXE4 827 aa3.89□□□□□ -1.79
PPP1R9A-208ENST00000456331 SAGE1Q9NXZ1 904 aa3.89□□□□□ -1.79
PPP1R9A-208ENST00000456331 SIRPGQ9P1W8 387 aa3.89□□□□□ -1.79
PPP1R9A-208ENST00000456331 TRBC2A0A5B9 178 aa3.88□□□□□ -1.79
PPP1R9A-208ENST00000456331 RNF212BA8MTL3 300 aa3.88□□□□□ -1.79
PPP1R9A-208ENST00000456331 FOXE1O00358 373 aaPredicted RBP3.88□□□□□ -1.79
PPP1R9A-208ENST00000456331 KDELR3O43731 214 aa3.88□□□□□ -1.79
PPP1R9A-208ENST00000456331 PQBP1O60828 265 aaKnown RBP3.88□□□□□ -1.79
PPP1R9A-208ENST00000456331 GPR37L1O60883 481 aa3.88□□□□□ -1.79
PPP1R9A-208ENST00000456331 PLGP00747 810 aaPredicted RBP3.88□□□□□ -1.79
PPP1R9A-208ENST00000456331 MAOAP21397 527 aa3.88□□□□□ -1.79
PPP1R9A-208ENST00000456331 ASPAP45381 313 aa3.88□□□□□ -1.79
PPP1R9A-208ENST00000456331 VEZF1Q14119 521 aa3.88□□□□□ -1.79
PPP1R9A-208ENST00000456331 MLC1Q15049 377 aa3.88□□□□□ -1.79
PPP1R9A-208ENST00000456331 UAP1L1Q3KQV9 507 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms