RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 OR10H4Q8NGA5 316 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 COQ8BQ96D53 544 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 MKRN2Q9H000 416 aaKnown RBP5.05□□□□□ -1.6
CSMD3-204ENST00000455883 SEMA6AQ9H2E6 1030 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 IL26Q9NPH9 171 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 SLC2A9Q9NRM0 540 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 KLHL9Q9P2J3 617 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 SCML1Q9UN30 329 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 MRPS17Q9Y2R5 130 aaKnown RBP5.05□□□□□ -1.6
CSMD3-204ENST00000455883 MED31Q9Y3C7 131 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 C1orf167Q5SNV9 1468 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 B3GALT2O43825 422 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 HK1P19367 917 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 ADRA1BP35368 520 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 MAGEA11P43364 429 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 ASPAP45381 313 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 GPR50Q13585 617 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 DSC3Q14574 896 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 GPR68Q15743 365 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 RAB11BQ15907 218 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 Q3C1V9 767 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 MIIPQ5JXC2 388 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 EXOSC6Q5RKV6 272 aaKnown RBP5.05□□□□□ -1.6
CSMD3-204ENST00000455883 FAM180AQ6UWF9 173 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 CEP68Q76N32 757 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 SERPINA11Q86U17 422 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 BEST3Q8N1M1 668 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 COX18Q8N8Q8 333 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 OR2AJ1Q8NGZ0 328 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 SLC2A14Q8TDB8 520 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 ADAMTS14Q8WXS8 1223 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 PTCHD1Q96NR3 888 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 CCNL2Q96S94 520 aaPredicted RBP5.05□□□□□ -1.6
CSMD3-204ENST00000455883 REEP4Q9H6H4 257 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 SEMA4BQ9NPR2 832 aaPredicted RBP5.05□□□□□ -1.6
CSMD3-204ENST00000455883 TAF1LQ8IZX4 1826 aa5.05□□□□□ -1.6
CSMD3-204ENST00000455883 EML5Q05BV3 1969 aa5.04□□□□□ -1.6
CSMD3-204ENST00000455883 GLYATL1P3A0A0U1RQE8 302 aa5.04□□□□□ -1.6
CSMD3-204ENST00000455883 MANSC4A6NHS7 340 aaPredicted RBP5.04□□□□□ -1.6
CSMD3-204ENST00000455883 CLDN24A6NM45 220 aa5.04□□□□□ -1.6
CSMD3-204ENST00000455883 RBBP9O75884 186 aa5.04□□□□□ -1.6
CSMD3-204ENST00000455883 NFYBP25208 207 aa5.04□□□□□ -1.6
CSMD3-204ENST00000455883 CD86P42081 329 aa5.04□□□□□ -1.6
CSMD3-204ENST00000455883 ZNF81P51508 661 aa5.04□□□□□ -1.6
CSMD3-204ENST00000455883 TBCEQ15813 527 aaPredicted RBP5.04□□□□□ -1.6
CSMD3-204ENST00000455883 PRAMEF8Q5VWM4 474 aa5.04□□□□□ -1.6
CSMD3-204ENST00000455883 PRAMEF7Q5VXH5 474 aa5.04□□□□□ -1.6
CSMD3-204ENST00000455883 THOC6Q86W42 341 aaKnown RBP5.04□□□□□ -1.6
CSMD3-204ENST00000455883 TCTE3Q8IZS6 198 aa5.04□□□□□ -1.6
CSMD3-204ENST00000455883 VWA5B2Q8N398 1253 aa5.04□□□□□ -1.6
CSMD3-204ENST00000455883 ZSCAN4Q8NAM6 433 aaPredicted RBP5.04□□□□□ -1.6
CSMD3-204ENST00000455883 OR4F6Q8NGB9 312 aa5.04□□□□□ -1.6
CSMD3-204ENST00000455883 OR13J1Q8NGT2 312 aa5.04□□□□□ -1.6
CSMD3-204ENST00000455883 CORO2AQ92828 525 aa5.04□□□□□ -1.6
CSMD3-204ENST00000455883 KLHL15Q96M94 604 aa5.04□□□□□ -1.6
CSMD3-204ENST00000455883 ACBD6Q9BR61 282 aa5.04□□□□□ -1.6
CSMD3-204ENST00000455883 CADM1Q9BY67 442 aaKnown RBP5.04□□□□□ -1.6
CSMD3-204ENST00000455883 TLE6Q9H808 572 aa5.04□□□□□ -1.6
CSMD3-204ENST00000455883 SPANXA1Q9NS26 97 aa5.04□□□□□ -1.6
CSMD3-204ENST00000455883 ZNF69Q9UC07 566 aa5.04□□□□□ -1.6
CSMD3-204ENST00000455883 SBF1O95248 1867 aa5.04□□□□□ -1.6
CSMD3-204ENST00000455883 K7EPI3 171 aa5.04□□□□□ -1.6
CSMD3-204ENST00000455883 CAPN5O15484 640 aaPredicted RBP5.04□□□□□ -1.6
CSMD3-204ENST00000455883 YKT6O15498 198 aa5.04□□□□□ -1.6
CSMD3-204ENST00000455883 USP17L7P0C7H9 530 aa5.04□□□□□ -1.6
CSMD3-204ENST00000455883 PLEKHS1Q5SXH7 462 aa5.04□□□□□ -1.6
CSMD3-204ENST00000455883 PRSS55Q6UWB4 352 aaPredicted RBP5.04□□□□□ -1.6
CSMD3-204ENST00000455883 VSIG10LQ86VR7 867 aa5.04□□□□□ -1.6
CSMD3-204ENST00000455883 SERPINA12Q8IW75 414 aa5.04□□□□□ -1.6
CSMD3-204ENST00000455883 SCML4Q8N228 414 aa5.04□□□□□ -1.6
CSMD3-204ENST00000455883 TSEN2Q8NCE0 465 aaKnown RBP5.04□□□□□ -1.6
CSMD3-204ENST00000455883 TM9SF4Q92544 642 aa5.04□□□□□ -1.6
CSMD3-204ENST00000455883 DNASE1L2Q92874 299 aa5.04□□□□□ -1.6
CSMD3-204ENST00000455883 CMTM3Q96MX0 182 aa5.04□□□□□ -1.6
CSMD3-204ENST00000455883 DUSP26Q9BV47 211 aa5.04□□□□□ -1.6
CSMD3-204ENST00000455883 AGO3Q9H9G7 860 aaKnown RBP5.04□□□□□ -1.6
CSMD3-204ENST00000455883 SEC61A2Q9H9S3 476 aa5.04□□□□□ -1.6
CSMD3-204ENST00000455883 MEAF6Q9HAF1 191 aa5.04□□□□□ -1.6
CSMD3-204ENST00000455883 PLCH1Q4KWH8 1693 aa5.04□□□□□ -1.6
CSMD3-204ENST00000455883 GADD45GO95257 159 aa5.04□□□□□ -1.6
CSMD3-204ENST00000455883 NFATC1O95644 943 aa5.04□□□□□ -1.6
CSMD3-204ENST00000455883 TNNI3P19429 210 aa5.04□□□□□ -1.6
CSMD3-204ENST00000455883 POLR2HP52434 150 aaKnown RBP5.04□□□□□ -1.6
CSMD3-204ENST00000455883 HMGCS1Q01581 520 aa5.04□□□□□ -1.6
CSMD3-204ENST00000455883 NAE1Q13564 534 aa5.04□□□□□ -1.6
CSMD3-204ENST00000455883 TMEM69Q5SWH9 247 aa5.04□□□□□ -1.6
CSMD3-204ENST00000455883 FRG2Q64ET8 278 aa5.04□□□□□ -1.6
CSMD3-204ENST00000455883 VN1R5Q7Z5H4 357 aa5.04□□□□□ -1.6
CSMD3-204ENST00000455883 OR2T4Q8NH00 348 aa5.04□□□□□ -1.6
CSMD3-204ENST00000455883 CMTM7Q96FZ5 175 aa5.04□□□□□ -1.6
CSMD3-204ENST00000455883 ZNF578Q96N58 590 aaPredicted RBP5.04□□□□□ -1.6
CSMD3-204ENST00000455883 FRG2BQ96QU4 278 aa5.04□□□□□ -1.6
CSMD3-204ENST00000455883 TMEM100Q9NV29 134 aa5.04□□□□□ -1.6
CSMD3-204ENST00000455883 SIPA1L3O60292 1781 aaPredicted RBP5.04□□□□□ -1.6
CSMD3-204ENST00000455883 TTC34A8MYJ7 566 aa5.04□□□□□ -1.6
CSMD3-204ENST00000455883 CDK6Q00534 326 aa5.04□□□□□ -1.6
CSMD3-204ENST00000455883 ZNF266Q14584 549 aa5.04□□□□□ -1.6
CSMD3-204ENST00000455883 ARHGAP19Q14CB8 494 aa5.04□□□□□ -1.6
CSMD3-204ENST00000455883 ACSBG2Q5FVE4 666 aa5.04□□□□□ -1.6
CSMD3-204ENST00000455883 SH3D19Q5HYK7 790 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms