RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 GPR143P51810 404 aa13.28□□□□□ -0.28
LYSMD3-202ENST00000453259 STXBP1P61764 594 aaKnown RBP13.28□□□□□ -0.28
LYSMD3-202ENST00000453259 REEP5Q00765 189 aa13.28□□□□□ -0.28
LYSMD3-202ENST00000453259 RCN2Q14257 317 aa13.28□□□□□ -0.28
LYSMD3-202ENST00000453259 ELAVL1Q15717 326 aaKnown RBP13.28□□□□□ -0.28
LYSMD3-202ENST00000453259 HECTD2Q5U5R9 776 aa13.28□□□□□ -0.28
LYSMD3-202ENST00000453259 MBOAT1Q6ZNC8 495 aa13.28□□□□□ -0.28
LYSMD3-202ENST00000453259 RTL4Q6ZR62 310 aa13.28□□□□□ -0.28
LYSMD3-202ENST00000453259 GALNT7Q86SF2 657 aa13.28□□□□□ -0.28
LYSMD3-202ENST00000453259 TMEM132CQ8N3T6 1108 aa13.28□□□□□ -0.28
LYSMD3-202ENST00000453259 RPRMLQ8N4K4 120 aa13.28□□□□□ -0.28
LYSMD3-202ENST00000453259 TTLQ8NG68 377 aa13.28□□□□□ -0.28
LYSMD3-202ENST00000453259 ALKBH8Q96BT7 664 aaKnown RBP13.28□□□□□ -0.28
LYSMD3-202ENST00000453259 FBXL8Q96CD0 374 aa13.28□□□□□ -0.28
LYSMD3-202ENST00000453259 PDLIM2Q96JY6 352 aa13.28□□□□□ -0.28
LYSMD3-202ENST00000453259 TTTY12Q9BZ98 90 aa13.28□□□□□ -0.28
LYSMD3-202ENST00000453259 DEFB127Q9H1M4 99 aa13.28□□□□□ -0.28
LYSMD3-202ENST00000453259 IL1RL2Q9HB29 575 aa13.28□□□□□ -0.28
LYSMD3-202ENST00000453259 NECTIN3Q9NQS3 549 aa13.28□□□□□ -0.28
LYSMD3-202ENST00000453259 RASSF1Q9NS23 344 aa13.28□□□□□ -0.28
LYSMD3-202ENST00000453259 PNPLA3Q9NST1 481 aa13.28□□□□□ -0.28
LYSMD3-202ENST00000453259 DEPPQ9NTK1 212 aa13.28□□□□□ -0.28
LYSMD3-202ENST00000453259 MYOTQ9UBF9 498 aa13.28□□□□□ -0.28
LYSMD3-202ENST00000453259 FOXD3Q9UJU5 478 aaPredicted RBP13.28□□□□□ -0.28
LYSMD3-202ENST00000453259 HCN1O60741 890 aa13.27□□□□□ -0.29
LYSMD3-202ENST00000453259 OR2J2O76002 312 aa13.27□□□□□ -0.29
LYSMD3-202ENST00000453259 HAUS5O94927 633 aa13.27□□□□□ -0.29
LYSMD3-202ENST00000453259 FGGP02679 453 aa13.27□□□□□ -0.29
LYSMD3-202ENST00000453259 MAGEA3P43357 314 aa13.27□□□□□ -0.29
LYSMD3-202ENST00000453259 KIR2DL3P43628 341 aa13.27□□□□□ -0.29
LYSMD3-202ENST00000453259 IL2P60568 153 aa13.27□□□□□ -0.29
LYSMD3-202ENST00000453259 GPS1Q13098 491 aa13.27□□□□□ -0.29
LYSMD3-202ENST00000453259 WLSQ5T9L3 541 aa13.27□□□□□ -0.29
LYSMD3-202ENST00000453259 RIPPLY2Q5TAB7 128 aa13.27□□□□□ -0.29
LYSMD3-202ENST00000453259 TRILQ7L0X0 811 aa13.27□□□□□ -0.29
LYSMD3-202ENST00000453259 BIVMQ86UB2 503 aa13.27□□□□□ -0.29
LYSMD3-202ENST00000453259 ZNF595Q8IYB9 648 aa13.27□□□□□ -0.29
LYSMD3-202ENST00000453259 MMP21Q8N119 569 aa13.27□□□□□ -0.29
LYSMD3-202ENST00000453259 CA13Q8N1Q1 262 aa13.27□□□□□ -0.29
LYSMD3-202ENST00000453259 C2CD4AQ8NCU7 369 aaPredicted RBP13.27□□□□□ -0.29
LYSMD3-202ENST00000453259 MORN4Q8NDC4 146 aa13.27□□□□□ -0.29
LYSMD3-202ENST00000453259 GOT1L1Q8NHS2 421 aaPredicted RBP13.27□□□□□ -0.29
LYSMD3-202ENST00000453259 FAM222BQ8WU58 562 aa13.27□□□□□ -0.29
LYSMD3-202ENST00000453259 DAZLQ92904 295 aaKnown RBP13.27□□□□□ -0.29
LYSMD3-202ENST00000453259 NEIL2Q969S2 332 aa13.27□□□□□ -0.29
LYSMD3-202ENST00000453259 NCLNQ969V3 563 aa13.27□□□□□ -0.29
LYSMD3-202ENST00000453259 GAL3ST3Q96A11 431 aa13.27□□□□□ -0.29
LYSMD3-202ENST00000453259 FAR2Q96K12 515 aa13.27□□□□□ -0.29
LYSMD3-202ENST00000453259 SERPINB12Q96P63 405 aa13.27□□□□□ -0.29
LYSMD3-202ENST00000453259 OR4K3Q96R72 315 aa13.27□□□□□ -0.29
LYSMD3-202ENST00000453259 DESI2Q9BSY9 194 aa13.27□□□□□ -0.29
LYSMD3-202ENST00000453259 ZNF358Q9NW07 568 aa13.27□□□□□ -0.29
LYSMD3-202ENST00000453259 ZNF223Q9UK11 482 aaPredicted RBP13.27□□□□□ -0.29
LYSMD3-202ENST00000453259 CORO1CQ9ULV4 474 aaPredicted RBP13.27□□□□□ -0.29
LYSMD3-202ENST00000453259 RPH3AQ9Y2J0 694 aaPredicted RBP13.27□□□□□ -0.29
LYSMD3-202ENST00000453259 FAM215AQ9Y5M1 114 aa13.27□□□□□ -0.29
LYSMD3-202ENST00000453259 KCNE2Q9Y6J6 123 aa13.27□□□□□ -0.29
LYSMD3-202ENST00000453259 A0A0G2JNJ9 132 aa13.26□□□□□ -0.29
LYSMD3-202ENST00000453259 SYT5O00445 386 aa13.26□□□□□ -0.29
LYSMD3-202ENST00000453259 DNAJB6O75190 326 aa13.26□□□□□ -0.29
LYSMD3-202ENST00000453259 CNR1P21554 472 aa13.26□□□□□ -0.29
LYSMD3-202ENST00000453259 DLX5P56178 289 aa13.26□□□□□ -0.29
LYSMD3-202ENST00000453259 RAB8AP61006 207 aa13.26□□□□□ -0.29
LYSMD3-202ENST00000453259 MAP1AP78559 2803 aaPredicted RBP13.26□□□□□ -0.29
LYSMD3-202ENST00000453259 HYAL2Q12891 473 aa13.26□□□□□ -0.29
LYSMD3-202ENST00000453259 FOXD4Q12950 439 aaPredicted RBP13.26□□□□□ -0.29
LYSMD3-202ENST00000453259 CEBPEQ15744 281 aa13.26□□□□□ -0.29
LYSMD3-202ENST00000453259 ZNF585AQ6P3V2 769 aa13.26□□□□□ -0.29
LYSMD3-202ENST00000453259 OPN5Q6U736 354 aa13.26□□□□□ -0.29
LYSMD3-202ENST00000453259 HSDL2Q6YN16 418 aa13.26□□□□□ -0.29
LYSMD3-202ENST00000453259 OR14A16Q8NHC5 309 aa13.26□□□□□ -0.29
LYSMD3-202ENST00000453259 NRGNQ92686 78 aa13.26□□□□□ -0.29
LYSMD3-202ENST00000453259 LINGO1Q96FE5 620 aa13.26□□□□□ -0.29
LYSMD3-202ENST00000453259 RASL10BQ96S79 203 aa13.26□□□□□ -0.29
LYSMD3-202ENST00000453259 PITHD1Q9GZP4 211 aaPredicted RBP13.26□□□□□ -0.29
LYSMD3-202ENST00000453259 SACM1LQ9NTJ5 587 aa13.26□□□□□ -0.29
LYSMD3-202ENST00000453259 Q9UFV3 132 aa13.26□□□□□ -0.29
LYSMD3-202ENST00000453259 DYRK1BQ9Y463 629 aa13.26□□□□□ -0.29
LYSMD3-202ENST00000453259 CLCA3PQ9Y6N3 262 aa13.26□□□□□ -0.29
LYSMD3-202ENST00000453259 HSPB2A8KAH6 182 aa13.25□□□□□ -0.29
LYSMD3-202ENST00000453259 FAM166BA8MTA8 275 aa13.25□□□□□ -0.29
LYSMD3-202ENST00000453259 A8MUA0 341 aa13.25□□□□□ -0.29
LYSMD3-202ENST00000453259 PROM1O43490 865 aa13.25□□□□□ -0.29
LYSMD3-202ENST00000453259 TTC4O95801 387 aa13.25□□□□□ -0.29
LYSMD3-202ENST00000453259 KCNJ1P48048 391 aa13.25□□□□□ -0.29
LYSMD3-202ENST00000453259 MAN2A2P49641 1150 aa13.25□□□□□ -0.29
LYSMD3-202ENST00000453259 RAB38P57729 211 aa13.25□□□□□ -0.29
LYSMD3-202ENST00000453259 TIAL1Q01085 375 aaKnown RBP eCLIP13.25□□□□□ -0.29
LYSMD3-202ENST00000453259 SLC13A2Q13183 592 aa13.25□□□□□ -0.29
LYSMD3-202ENST00000453259 EFTUD2Q15029 972 aaKnown RBP eCLIP13.25□□□□□ -0.29
LYSMD3-202ENST00000453259 HSPB2Q16082 182 aa13.25□□□□□ -0.29
LYSMD3-202ENST00000453259 FBXL19-AS1Q494R0 122 aa13.25□□□□□ -0.29
LYSMD3-202ENST00000453259 FLYWCH1Q4VC44 716 aa13.25□□□□□ -0.29
LYSMD3-202ENST00000453259 HSP90AA5PQ58FG0 334 aa13.25□□□□□ -0.29
LYSMD3-202ENST00000453259 CATSPEREQ5SY80 951 aa13.25□□□□□ -0.29
LYSMD3-202ENST00000453259 C1orf185Q5T7R7 199 aa13.25□□□□□ -0.29
LYSMD3-202ENST00000453259 RTL6Q6ICC9 239 aa13.25□□□□□ -0.29
LYSMD3-202ENST00000453259 PAQR3Q6TCH7 311 aa13.25□□□□□ -0.29
LYSMD3-202ENST00000453259 CNTN4Q8IWV2 1026 aa13.25□□□□□ -0.29
LYSMD3-202ENST00000453259 ZZZ3Q8IYH5 903 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms