RNA–Protein interactions for RNA: ENST00000452979.5

HERC3-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 3

Gene HERC3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-207ENST00000452979 HIST1H2AHQ96KK5 128 aa10.88□□□□□ -0.67
HERC3-207ENST00000452979 OR4K3Q96R72 315 aa10.88□□□□□ -0.67
HERC3-207ENST00000452979 FMO2Q99518 471 aa10.88□□□□□ -0.67
HERC3-207ENST00000452979 HIST1H2AJQ99878 128 aa10.88□□□□□ -0.67
HERC3-207ENST00000452979 ZNF559Q9BR84 538 aa10.88□□□□□ -0.67
HERC3-207ENST00000452979 H2AFJQ9BTM1 129 aa10.88□□□□□ -0.67
HERC3-207ENST00000452979 PHACTR1Q9C0D0 580 aa10.88□□□□□ -0.67
HERC3-207ENST00000452979 CXXC4Q9H2H0 198 aa10.88□□□□□ -0.67
HERC3-207ENST00000452979 SLC24A3Q9HC58 644 aa10.88□□□□□ -0.67
HERC3-207ENST00000452979 NECTIN3Q9NQS3 549 aa10.88□□□□□ -0.67
HERC3-207ENST00000452979 C20orf96Q9NUD7 363 aaPredicted RBP10.88□□□□□ -0.67
HERC3-207ENST00000452979 ZFATQ9P243 1243 aa10.88□□□□□ -0.67
HERC3-207ENST00000452979 TRMT6Q9UJA5 497 aaKnown RBP10.88□□□□□ -0.67
HERC3-207ENST00000452979 FBXO5Q9UKT4 447 aa10.88□□□□□ -0.67
HERC3-207ENST00000452979 CHMP2BQ9UQN3 213 aa10.88□□□□□ -0.67
HERC3-207ENST00000452979 ITPR3Q14573 2671 aa10.87□□□□□ -0.67
HERC3-207ENST00000452979 MTORP42345 2549 aa10.87□□□□□ -0.67
HERC3-207ENST00000452979 CTIFO43310 598 aaKnown RBP10.87□□□□□ -0.67
HERC3-207ENST00000452979 KLK8O60259 260 aa10.87□□□□□ -0.67
HERC3-207ENST00000452979 CDC40O60508 579 aaKnown RBP eCLIP10.87□□□□□ -0.67
HERC3-207ENST00000452979 ITGA10O75578 1167 aa10.87□□□□□ -0.67
HERC3-207ENST00000452979 ZNF888P0CJ79 500 aaPredicted RBP10.87□□□□□ -0.67
HERC3-207ENST00000452979 HOXB4P17483 251 aaPredicted RBP10.87□□□□□ -0.67
HERC3-207ENST00000452979 MAOAP21397 527 aa10.87□□□□□ -0.67
HERC3-207ENST00000452979 ELK3P41970 407 aa10.87□□□□□ -0.67
HERC3-207ENST00000452979 SCTRP47872 440 aa10.87□□□□□ -0.67
HERC3-207ENST00000452979 RGS4P49798 205 aa10.87□□□□□ -0.67
HERC3-207ENST00000452979 CLCN2P51788 898 aa10.87□□□□□ -0.67
HERC3-207ENST00000452979 GPR143P51810 404 aa10.87□□□□□ -0.67
HERC3-207ENST00000452979 RGS1Q08116 209 aa10.87□□□□□ -0.67
HERC3-207ENST00000452979 HYAL2Q12891 473 aa10.87□□□□□ -0.67
HERC3-207ENST00000452979 PHKG1Q16816 387 aa10.87□□□□□ -0.67
HERC3-207ENST00000452979 HSP90AA5PQ58FG0 334 aa10.87□□□□□ -0.67
HERC3-207ENST00000452979 CATSPEREQ5SY80 951 aa10.87□□□□□ -0.67
HERC3-207ENST00000452979 WDR93Q6P2C0 686 aa10.87□□□□□ -0.67
HERC3-207ENST00000452979 PAOXQ6QHF9 649 aa10.87□□□□□ -0.67
HERC3-207ENST00000452979 PAQR3Q6TCH7 311 aa10.87□□□□□ -0.67
HERC3-207ENST00000452979 CCDC25Q86WR0 208 aa10.87□□□□□ -0.67
HERC3-207ENST00000452979 ANKMY2Q8IV38 441 aa10.87□□□□□ -0.67
HERC3-207ENST00000452979 ZBED8Q8IZ13 594 aa10.87□□□□□ -0.67
HERC3-207ENST00000452979 CYP4Z2PQ8N1L4 340 aa10.87□□□□□ -0.67
HERC3-207ENST00000452979 RPRMLQ8N4K4 120 aa10.87□□□□□ -0.67
HERC3-207ENST00000452979 TBC1D19Q8N5T2 526 aa10.87□□□□□ -0.67
HERC3-207ENST00000452979 EIF1ADQ8N9N8 165 aaKnown RBP10.87□□□□□ -0.67
HERC3-207ENST00000452979 MYRIPQ8NFW9 859 aa10.87□□□□□ -0.67
HERC3-207ENST00000452979 ALKBH8Q96BT7 664 aaKnown RBP10.87□□□□□ -0.67
HERC3-207ENST00000452979 FOXC2Q99958 501 aa10.87□□□□□ -0.67
HERC3-207ENST00000452979 PARD6BQ9BYG5 372 aa10.87□□□□□ -0.67
HERC3-207ENST00000452979 SLC6A16Q9GZN6 736 aa10.87□□□□□ -0.67
HERC3-207ENST00000452979 SAYSD1Q9NPB0 183 aa10.87□□□□□ -0.67
HERC3-207ENST00000452979 TAS2R13Q9NYV9 303 aa10.87□□□□□ -0.67
HERC3-207ENST00000452979 ZNF223Q9UK11 482 aaPredicted RBP10.87□□□□□ -0.67
HERC3-207ENST00000452979 RAB21Q9UL25 225 aa10.87□□□□□ -0.67
HERC3-207ENST00000452979 TRBV11-1A0A0K0K1C0 115 aa10.86□□□□□ -0.67
HERC3-207ENST00000452979 URADA6NGE7 173 aa10.86□□□□□ -0.67
HERC3-207ENST00000452979 FAM90A27PA6NNH2 459 aa10.86□□□□□ -0.67
HERC3-207ENST00000452979 EIF3HO15372 352 aaKnown RBP eCLIP10.86□□□□□ -0.67
HERC3-207ENST00000452979 PDE9AO76083 593 aa10.86□□□□□ -0.67
HERC3-207ENST00000452979 SERPIND1P05546 499 aa10.86□□□□□ -0.67
HERC3-207ENST00000452979 RNH1P13489 461 aaKnown RBP10.86□□□□□ -0.67
HERC3-207ENST00000452979 CD99P14209 185 aa10.86□□□□□ -0.67
HERC3-207ENST00000452979 GABRB3P28472 473 aa10.86□□□□□ -0.67
HERC3-207ENST00000452979 NR0B1P51843 470 aaKnown RBP10.86□□□□□ -0.67
HERC3-207ENST00000452979 IST1P53990 364 aa10.86□□□□□ -0.67
HERC3-207ENST00000452979 AP1S2P56377 157 aa10.86□□□□□ -0.67
HERC3-207ENST00000452979 NUP107P57740 925 aa10.86□□□□□ -0.67
HERC3-207ENST00000452979 PMPCAQ10713 525 aa10.86□□□□□ -0.67
HERC3-207ENST00000452979 CSHL1Q14406 222 aa10.86□□□□□ -0.67
HERC3-207ENST00000452979 GXYLT1Q4G148 440 aa10.86□□□□□ -0.67
HERC3-207ENST00000452979 RGS9BPQ6ZS82 235 aa10.86□□□□□ -0.67
HERC3-207ENST00000452979 CCDC71Q8IV32 467 aaPredicted RBP10.86□□□□□ -0.67
HERC3-207ENST00000452979 GPALPP1Q8IXQ4 340 aa10.86□□□□□ -0.67
HERC3-207ENST00000452979 CLYBLQ8N0X4 340 aa10.86□□□□□ -0.67
HERC3-207ENST00000452979 CA13Q8N1Q1 262 aa10.86□□□□□ -0.67
HERC3-207ENST00000452979 MYO1HQ8N1T3 1032 aa10.86□□□□□ -0.67
HERC3-207ENST00000452979 TMEM156Q8N614 296 aa10.86□□□□□ -0.67
HERC3-207ENST00000452979 C2CD4AQ8NCU7 369 aaPredicted RBP10.86□□□□□ -0.67
HERC3-207ENST00000452979 FBXO36Q8NEA4 188 aa10.86□□□□□ -0.67
HERC3-207ENST00000452979 ARMC2Q8NEN0 867 aa10.86□□□□□ -0.67
HERC3-207ENST00000452979 TRPV3Q8NET8 790 aa10.86□□□□□ -0.67
HERC3-207ENST00000452979 SLC5A11Q8WWX8 675 aa10.86□□□□□ -0.67
HERC3-207ENST00000452979 NINJ1Q92982 152 aa10.86□□□□□ -0.67
HERC3-207ENST00000452979 NEIL2Q969S2 332 aa10.86□□□□□ -0.67
HERC3-207ENST00000452979 PYCR2Q96C36 320 aa10.86□□□□□ -0.67
HERC3-207ENST00000452979 VMP1Q96GC9 406 aa10.86□□□□□ -0.67
HERC3-207ENST00000452979 SEC16BQ96JE7 1060 aa10.86□□□□□ -0.67
HERC3-207ENST00000452979 TXLNGYQ9BZA5 131 aa10.86□□□□□ -0.67
HERC3-207ENST00000452979 DEFB127Q9H1M4 99 aa10.86□□□□□ -0.67
HERC3-207ENST00000452979 SPNS1Q9H2V7 528 aa10.86□□□□□ -0.67
HERC3-207ENST00000452979 KLHL31Q9H511 634 aa10.86□□□□□ -0.67
HERC3-207ENST00000452979 ZDHHC11Q9H8X9 412 aa10.86□□□□□ -0.67
HERC3-207ENST00000452979 TIMMDC1Q9NPL8 285 aa10.86□□□□□ -0.67
HERC3-207ENST00000452979 ARL15Q9NXU5 204 aa10.86□□□□□ -0.67
HERC3-207ENST00000452979 MTRF1LQ9UGC7 380 aaKnown RBP10.86□□□□□ -0.67
HERC3-207ENST00000452979 YARS2Q9Y2Z4 477 aaKnown RBP10.86□□□□□ -0.67
HERC3-207ENST00000452979 MMACHCQ9Y4U1 282 aa10.86□□□□□ -0.67
HERC3-207ENST00000452979 MAD1L1Q9Y6D9 718 aa10.86□□□□□ -0.67
HERC3-207ENST00000452979 INTS1Q8N201 2190 aaKnown RBP10.86□□□□□ -0.67
HERC3-207ENST00000452979 OR14I1A6ND48 311 aa10.85□□□□□ -0.67
HERC3-207ENST00000452979 TMEM200CA6NKL6 621 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms