RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 ALG9Q9H6U8 611 aa12.07□□□□□ -0.48
CHD3-206ENST00000452447 COPS7BQ9H9Q2 264 aaPredicted RBP12.07□□□□□ -0.48
CHD3-206ENST00000452447 NMRAL1Q9HBL8 299 aa12.07□□□□□ -0.48
CHD3-206ENST00000452447 PTBP2Q9UKA9 531 aaKnown RBP12.07□□□□□ -0.48
CHD3-206ENST00000452447 TRGV8A0A0C4DH27 118 aa12.06□□□□□ -0.48
CHD3-206ENST00000452447 MYO1DO94832 1006 aa12.06□□□□□ -0.48
CHD3-206ENST00000452447 TFEBP19484 476 aa12.06□□□□□ -0.48
CHD3-206ENST00000452447 CYB561P49447 251 aa12.06□□□□□ -0.48
CHD3-206ENST00000452447 MTTPP55157 894 aa12.06□□□□□ -0.48
CHD3-206ENST00000452447 HSD17B7P56937 341 aa12.06□□□□□ -0.48
CHD3-206ENST00000452447 RAB38P57729 211 aa12.06□□□□□ -0.48
CHD3-206ENST00000452447 SLC7A5Q01650 507 aa12.06□□□□□ -0.48
CHD3-206ENST00000452447 CHIT1Q13231 466 aa12.06□□□□□ -0.48
CHD3-206ENST00000452447 NAB1Q13506 487 aa12.06□□□□□ -0.48
CHD3-206ENST00000452447 RUNX2Q13950 521 aa12.06□□□□□ -0.48
CHD3-206ENST00000452447 RCN2Q14257 317 aa12.06□□□□□ -0.48
CHD3-206ENST00000452447 ZRSR2Q15696 482 aaKnown RBP12.06□□□□□ -0.48
CHD3-206ENST00000452447 MAPKAPK3Q16644 382 aa12.06□□□□□ -0.48
CHD3-206ENST00000452447 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.06□□□□□ -0.481e-6■■■■□ 25.1
CHD3-206ENST00000452447 SLC25A25Q6KCM7 469 aa12.06□□□□□ -0.48
CHD3-206ENST00000452447 C8orf74Q6P047 294 aa12.06□□□□□ -0.48
CHD3-206ENST00000452447 ZDHHC24Q6UX98 284 aa12.06□□□□□ -0.48
CHD3-206ENST00000452447 LRRC70Q7Z2Q7 622 aa12.06□□□□□ -0.48
CHD3-206ENST00000452447 ZNF572Q7Z3I7 529 aaPredicted RBP12.06□□□□□ -0.48
CHD3-206ENST00000452447 ISCA2Q86U28 154 aa12.06□□□□□ -0.48
CHD3-206ENST00000452447 B3GNT7Q8NFL0 401 aa12.06□□□□□ -0.48
CHD3-206ENST00000452447 SCMH1Q96GD3 660 aa12.06□□□□□ -0.48
CHD3-206ENST00000452447 SERINC2Q96SA4 455 aa12.06□□□□□ -0.48
CHD3-206ENST00000452447 HES7Q9BYE0 225 aa12.06□□□□□ -0.48
CHD3-206ENST00000452447 CD244Q9BZW8 370 aa12.06□□□□□ -0.48
CHD3-206ENST00000452447 PRTFDC1Q9NRG1 225 aa12.06□□□□□ -0.48
CHD3-206ENST00000452447 PNO1Q9NRX1 252 aaKnown RBP12.06□□□□□ -0.48
CHD3-206ENST00000452447 PKDREJQ9NTG1 2253 aa12.05□□□□□ -0.48
CHD3-206ENST00000452447 ESYT3A0FGR9 886 aa12.05□□□□□ -0.48
CHD3-206ENST00000452447 SUPT3HB4E1H0 165 aa12.05□□□□□ -0.48
CHD3-206ENST00000452447 FCHO1O14526 889 aa12.05□□□□□ -0.48
CHD3-206ENST00000452447 SUPT3HO75486 399 aa12.05□□□□□ -0.48
CHD3-206ENST00000452447 SP1P08047 785 aa12.05□□□□□ -0.48
CHD3-206ENST00000452447 LTA4HP09960 611 aaKnown RBP12.05□□□□□ -0.48
CHD3-206ENST00000452447 SLC35E2BP0CK96 405 aa12.05□□□□□ -0.48
CHD3-206ENST00000452447 TPP2P29144 1249 aaPredicted RBP12.05□□□□□ -0.48
CHD3-206ENST00000452447 KCNC1P48547 511 aa12.05□□□□□ -0.48
CHD3-206ENST00000452447 CLCN2P51788 898 aa12.05□□□□□ -0.48
CHD3-206ENST00000452447 CASP6P55212 293 aa12.05□□□□□ -0.48
CHD3-206ENST00000452447 ALDH6A1Q02252 535 aaKnown RBP12.05□□□□□ -0.48
CHD3-206ENST00000452447 TERF2Q15554 542 aa12.05□□□□□ -0.48
CHD3-206ENST00000452447 TBCCQ15814 346 aa12.05□□□□□ -0.48
CHD3-206ENST00000452447 ADPRMQ3LIE5 342 aa12.05□□□□□ -0.48
CHD3-206ENST00000452447 ADNP2Q6IQ32 1131 aa12.05□□□□□ -0.48
CHD3-206ENST00000452447 ABHD17CQ6PCB6 329 aa12.05□□□□□ -0.48
CHD3-206ENST00000452447 GALNTL5Q7Z4T8 443 aa12.05□□□□□ -0.48
CHD3-206ENST00000452447 VN1R5Q7Z5H4 357 aa12.05□□□□□ -0.48
CHD3-206ENST00000452447 ZNF595Q8IYB9 648 aa12.05□□□□□ -0.48
CHD3-206ENST00000452447 FAM47BQ8NA70 645 aa12.05□□□□□ -0.48
CHD3-206ENST00000452447 SRFBP1Q8NEF9 429 aaKnown RBP12.05□□□□□ -0.48
CHD3-206ENST00000452447 NFAM1Q8NET5 270 aaPredicted RBP12.05□□□□□ -0.48
CHD3-206ENST00000452447 UBE2E3Q969T4 207 aa12.05□□□□□ -0.48
CHD3-206ENST00000452447 RELTQ969Z4 430 aa12.05□□□□□ -0.48
CHD3-206ENST00000452447 TMEM125Q96AQ2 219 aa12.05□□□□□ -0.48
CHD3-206ENST00000452447 MRRFQ96E11 262 aaKnown RBP12.05□□□□□ -0.48
CHD3-206ENST00000452447 WDR34Q96EX3 536 aa12.05□□□□□ -0.48
CHD3-206ENST00000452447 KCNC2Q96PR1 638 aa12.05□□□□□ -0.48
CHD3-206ENST00000452447 NUDT4Q9NZJ9 180 aa12.05□□□□□ -0.48
CHD3-206ENST00000452447 OPTCQ9UBM4 332 aa12.05□□□□□ -0.48
CHD3-206ENST00000452447 SUCOQ9UBS9 1254 aaKnown RBP12.05□□□□□ -0.48
CHD3-206ENST00000452447 ZNF490Q9ULM2 529 aaPredicted RBP12.05□□□□□ -0.48
CHD3-206ENST00000452447 ACOT9Q9Y305 439 aa12.05□□□□□ -0.48
CHD3-206ENST00000452447 DNAJC13O75165 2243 aa12.05□□□□□ -0.48
CHD3-206ENST00000452447 TRBV11-1A0A0K0K1C0 115 aa12.05□□□□□ -0.48
CHD3-206ENST00000452447 SYNDIG1LA6NDD5 238 aa12.05□□□□□ -0.48
CHD3-206ENST00000452447 UBXN8O00124 270 aa12.05□□□□□ -0.48
CHD3-206ENST00000452447 PRAMEF4O60810 478 aa12.05□□□□□ -0.48
CHD3-206ENST00000452447 KERAO60938 352 aa12.05□□□□□ -0.48
CHD3-206ENST00000452447 SLC25A12O75746 678 aa12.05□□□□□ -0.48
CHD3-206ENST00000452447 NEURL1O76050 574 aa12.05□□□□□ -0.48
CHD3-206ENST00000452447 TUBB4AP04350 444 aa12.05□□□□□ -0.48
CHD3-206ENST00000452447 CD22P20273 847 aa12.05□□□□□ -0.48
CHD3-206ENST00000452447 CERS1P27544 350 aa12.05□□□□□ -0.48
CHD3-206ENST00000452447 PHBP35232 272 aa12.05□□□□□ -0.48
CHD3-206ENST00000452447 GMPRP36959 345 aa12.05□□□□□ -0.48
CHD3-206ENST00000452447 DCTP40126 519 aa12.05□□□□□ -0.48
CHD3-206ENST00000452447 MSH2P43246 934 aa12.05□□□□□ -0.48
CHD3-206ENST00000452447 MLF1P58340 268 aa12.05□□□□□ -0.48
CHD3-206ENST00000452447 EFTUD2Q15029 972 aaKnown RBP eCLIP12.05□□□□□ -0.48
CHD3-206ENST00000452447 KRTCAP3Q53RY4 240 aa12.05□□□□□ -0.48
CHD3-206ENST00000452447 ZNF468Q5VIY5 522 aaPredicted RBP12.05□□□□□ -0.48
CHD3-206ENST00000452447 PRAMEF9Q5VWM5 478 aa12.05□□□□□ -0.48
CHD3-206ENST00000452447 ZNF787Q6DD87 383 aa12.05□□□□□ -0.48
CHD3-206ENST00000452447 CCDC91Q7Z6B0 441 aa12.05□□□□□ -0.48
CHD3-206ENST00000452447 SCUBE1Q8IWY4 988 aa12.05□□□□□ -0.48
CHD3-206ENST00000452447 THAP3Q8WTV1 239 aaPredicted RBP12.05□□□□□ -0.48
CHD3-206ENST00000452447 QRFPRQ96P65 431 aa12.05□□□□□ -0.48
CHD3-206ENST00000452447 F2RL3Q96RI0 385 aa12.05□□□□□ -0.48
CHD3-206ENST00000452447 ROGDIQ9GZN7 287 aa12.05□□□□□ -0.48
CHD3-206ENST00000452447 SH3BGRL2Q9UJC5 107 aa12.05□□□□□ -0.48
CHD3-206ENST00000452447 FBXW2Q9UKT8 454 aa12.05□□□□□ -0.48
CHD3-206ENST00000452447 ASPDHA6ND91 283 aa12.04□□□□□ -0.48
CHD3-206ENST00000452447 SYCE1LA8MT33 242 aa12.04□□□□□ -0.48
CHD3-206ENST00000452447 K7EPI3 171 aa12.04□□□□□ -0.48
CHD3-206ENST00000452447 CCL21O00585 134 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms