RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 ASB3Q9Y575 518 aa8.66□□□□□ -1.02
NIPBL-202ENST00000448238 THOC2Q8NI27 1593 aaKnown RBP8.66□□□□□ -1.02
NIPBL-202ENST00000448238 CASTOR2A6NHX0 329 aa8.66□□□□□ -1.02
NIPBL-202ENST00000448238 SMAD9O15198 467 aaKnown RBP8.66□□□□□ -1.02
NIPBL-202ENST00000448238 HLA-DOBP13765 273 aa8.66□□□□□ -1.02
NIPBL-202ENST00000448238 PRPS1L1P21108 318 aa8.66□□□□□ -1.02
NIPBL-202ENST00000448238 CCR8P51685 355 aa8.66□□□□□ -1.02
NIPBL-202ENST00000448238 BIDP55957 195 aa8.66□□□□□ -1.02
NIPBL-202ENST00000448238 PAN3Q58A45 887 aaKnown RBP8.66□□□□□ -1.02
NIPBL-202ENST00000448238 C6orf141Q5SZD1 244 aa8.66□□□□□ -1.02
NIPBL-202ENST00000448238 FAM43BQ6ZT52 329 aaPredicted RBP8.66□□□□□ -1.02
NIPBL-202ENST00000448238 NUSAP1Q9BXS6 441 aaKnown RBP8.66□□□□□ -1.02
NIPBL-202ENST00000448238 SOX17Q9H6I2 414 aaPredicted RBP8.66□□□□□ -1.02
NIPBL-202ENST00000448238 ELP3Q9H9T3 547 aa8.66□□□□□ -1.02
NIPBL-202ENST00000448238 KIAA1522Q9P206 1035 aaPredicted RBP8.66□□□□□ -1.02
NIPBL-202ENST00000448238 EXO1Q9UQ84 846 aaKnown RBP8.66□□□□□ -1.02
NIPBL-202ENST00000448238 CPDO75976 1380 aa8.66□□□□□ -1.02
NIPBL-202ENST00000448238 WASH4PA8MWX3 477 aa8.66□□□□□ -1.02
NIPBL-202ENST00000448238 EPHB6O15197 1021 aa8.66□□□□□ -1.02
NIPBL-202ENST00000448238 F2RP25116 425 aa8.66□□□□□ -1.02
NIPBL-202ENST00000448238 HTR7P34969 479 aa8.66□□□□□ -1.02
NIPBL-202ENST00000448238 ACTR1BP42025 376 aa8.66□□□□□ -1.02
NIPBL-202ENST00000448238 RBM39Q14498 530 aaKnown RBP8.66□□□□□ -1.02
NIPBL-202ENST00000448238 GK5Q6ZS86 529 aa8.66□□□□□ -1.02
NIPBL-202ENST00000448238 SLC30A7Q8NEW0 376 aa8.66□□□□□ -1.02
NIPBL-202ENST00000448238 OR56B4Q8NH76 319 aa8.66□□□□□ -1.02
NIPBL-202ENST00000448238 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.66□□□□□ -1.024e-6■■■■□ 20.6
NIPBL-202ENST00000448238 LCN9Q8WX39 176 aa8.66□□□□□ -1.02
NIPBL-202ENST00000448238 DCUN1D4Q92564 292 aa8.66□□□□□ -1.02
NIPBL-202ENST00000448238 HSFY1Q96LI6 401 aa8.66□□□□□ -1.02
NIPBL-202ENST00000448238 C7orf26Q96N11 449 aa8.66□□□□□ -1.02
NIPBL-202ENST00000448238 MYOZ2Q9NPC6 264 aa8.66□□□□□ -1.02
NIPBL-202ENST00000448238 FAM212BQ9NTI7 297 aaPredicted RBP8.66□□□□□ -1.02
NIPBL-202ENST00000448238 SLC39A9Q9NUM3 307 aa8.66□□□□□ -1.02
NIPBL-202ENST00000448238 SYNMO15061 1565 aa8.65□□□□□ -1.02
NIPBL-202ENST00000448238 A0A087WZY1 265 aa8.65□□□□□ -1.02
NIPBL-202ENST00000448238 A0A1W2PPW3 197 aa8.65□□□□□ -1.02
NIPBL-202ENST00000448238 NFKBIEO00221 500 aa8.65□□□□□ -1.02
NIPBL-202ENST00000448238 FASLGP48023 281 aa8.65□□□□□ -1.02
NIPBL-202ENST00000448238 HBG1P69891 147 aa8.65□□□□□ -1.02
NIPBL-202ENST00000448238 HBG2P69892 147 aa8.65□□□□□ -1.02
NIPBL-202ENST00000448238 HMGCS1Q01581 520 aa8.65□□□□□ -1.02
NIPBL-202ENST00000448238 SNTB1Q13884 538 aaKnown RBP8.65□□□□□ -1.02
NIPBL-202ENST00000448238 FAM151BQ6UXP7 276 aa8.65□□□□□ -1.02
NIPBL-202ENST00000448238 DBX2Q6ZNG2 339 aa8.65□□□□□ -1.02
NIPBL-202ENST00000448238 TRABD2AQ86V40 505 aa8.65□□□□□ -1.02
NIPBL-202ENST00000448238 SLC35F3Q8IY50 421 aa8.65□□□□□ -1.02
NIPBL-202ENST00000448238 PLPP5Q8NEB5 264 aa8.65□□□□□ -1.02
NIPBL-202ENST00000448238 FUCA2Q9BTY2 467 aa8.65□□□□□ -1.02
NIPBL-202ENST00000448238 SCPEP1Q9HB40 452 aa8.65□□□□□ -1.02
NIPBL-202ENST00000448238 WDR6Q9NNW5 1121 aaKnown RBP8.65□□□□□ -1.02
NIPBL-202ENST00000448238 PIH1D1Q9NWS0 290 aaKnown RBP8.65□□□□□ -1.02
NIPBL-202ENST00000448238 AGO1Q9UL18 857 aaKnown RBP8.65□□□□□ -1.02
NIPBL-202ENST00000448238 NAALAD2Q9Y3Q0 740 aa8.65□□□□□ -1.02
NIPBL-202ENST00000448238 C17orf112F2Z3M2 114 aa8.65□□□□□ -1.02
NIPBL-202ENST00000448238 TERTO14746 1132 aaKnown RBP8.65□□□□□ -1.02
NIPBL-202ENST00000448238 PHYHO14832 338 aa8.65□□□□□ -1.02
NIPBL-202ENST00000448238 GJB1P08034 283 aa8.65□□□□□ -1.02
NIPBL-202ENST00000448238 UBE2KP61086 200 aa8.65□□□□□ -1.02
NIPBL-202ENST00000448238 GBE1Q04446 702 aa8.65□□□□□ -1.02
NIPBL-202ENST00000448238 ANKRD54Q6NXT1 300 aa8.65□□□□□ -1.02
NIPBL-202ENST00000448238 ZFPM1Q8IX07 1006 aa8.65□□□□□ -1.02
NIPBL-202ENST00000448238 UROC1Q96N76 676 aa8.65□□□□□ -1.02
NIPBL-202ENST00000448238 CORO1BQ9BR76 489 aa8.65□□□□□ -1.02
NIPBL-202ENST00000448238 SH2D3AQ9BRG2 576 aa8.65□□□□□ -1.02
NIPBL-202ENST00000448238 SLC28A3Q9HAS3 691 aa8.65□□□□□ -1.02
NIPBL-202ENST00000448238 MRPL22Q9NWU5 206 aaKnown RBP8.65□□□□□ -1.02
NIPBL-202ENST00000448238 RALYQ9UKM9 306 aaKnown RBP8.65□□□□□ -1.02
NIPBL-202ENST00000448238 DUSP10Q9Y6W6 482 aa8.65□□□□□ -1.02
NIPBL-202ENST00000448238 TSPAN11A1L157 253 aa8.65□□□□□ -1.02
NIPBL-202ENST00000448238 EDF1O60869 148 aaKnown RBP8.65□□□□□ -1.02
NIPBL-202ENST00000448238 PTBP3O95758 552 aaKnown RBP8.65□□□□□ -1.02
NIPBL-202ENST00000448238 CLEC3BP05452 202 aa8.65□□□□□ -1.02
NIPBL-202ENST00000448238 GNSP15586 552 aa8.65□□□□□ -1.02
NIPBL-202ENST00000448238 PFKLP17858 780 aa8.65□□□□□ -1.02
NIPBL-202ENST00000448238 NDUFS1P28331 727 aa8.65□□□□□ -1.02
NIPBL-202ENST00000448238 F2RL1P55085 397 aa8.65□□□□□ -1.02
NIPBL-202ENST00000448238 HSF1Q00613 529 aa8.65□□□□□ -1.02
NIPBL-202ENST00000448238 SP3Q02447 781 aa8.65□□□□□ -1.02
NIPBL-202ENST00000448238 MAMLD1Q13495 774 aa8.65□□□□□ -1.02
NIPBL-202ENST00000448238 NFATC4Q14934 902 aa8.65□□□□□ -1.02
NIPBL-202ENST00000448238 C22orf42Q6IC83 251 aa8.65□□□□□ -1.02
NIPBL-202ENST00000448238 GAREM2Q75VX8 874 aa8.65□□□□□ -1.02
NIPBL-202ENST00000448238 ZNF572Q7Z3I7 529 aaPredicted RBP8.65□□□□□ -1.02
NIPBL-202ENST00000448238 TMEM156Q8N614 296 aa8.65□□□□□ -1.02
NIPBL-202ENST00000448238 ABCG5Q9H222 651 aa8.65□□□□□ -1.02
NIPBL-202ENST00000448238 NIPAL2Q9H841 368 aa8.65□□□□□ -1.02
NIPBL-202ENST00000448238 COQ10BQ9H8M1 238 aa8.65□□□□□ -1.02
NIPBL-202ENST00000448238 ERVK13-1Q9NX77 482 aa8.65□□□□□ -1.02
NIPBL-202ENST00000448238 FBXW2Q9UKT8 454 aa8.65□□□□□ -1.02
NIPBL-202ENST00000448238 RAPGEF6Q8TEU7 1601 aa8.65□□□□□ -1.02
NIPBL-202ENST00000448238 A0A1B0GV50 99 aa8.65□□□□□ -1.02
NIPBL-202ENST00000448238 ACKR2O00590 384 aa8.65□□□□□ -1.02
NIPBL-202ENST00000448238 ABCB7O75027 752 aa8.65□□□□□ -1.02
NIPBL-202ENST00000448238 CSDE1O75534 798 aaKnown RBP8.65□□□□□ -1.02
NIPBL-202ENST00000448238 CNOT4O95628 575 aaKnown RBP8.65□□□□□ -1.02
NIPBL-202ENST00000448238 TGFB1P01137 390 aa8.65□□□□□ -1.02
NIPBL-202ENST00000448238 CRMP1Q14194 572 aa8.65□□□□□ -1.02
NIPBL-202ENST00000448238 CST9LP1Q5W188 147 aa8.65□□□□□ -1.02
NIPBL-202ENST00000448238 TBC1D10CQ8IV04 446 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms