RNA–Protein interactions for RNA: ENST00000447510.6

PROM1-201, Transcript of prominin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PROM1, Length 3,977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-201ENST00000447510 PELI3Q8N2H9 469 aa5.71□□□□□ -1.5
PROM1-201ENST00000447510 CNIH3Q8TBE1 160 aa5.71□□□□□ -1.5
PROM1-201ENST00000447510 STAG3L4Q8TBR4 150 aa5.71□□□□□ -1.5
PROM1-201ENST00000447510 LCN9Q8WX39 176 aa5.71□□□□□ -1.5
PROM1-201ENST00000447510 NCLNQ969V3 563 aa5.71□□□□□ -1.5
PROM1-201ENST00000447510 ZUFSPQ96AP4 578 aa5.71□□□□□ -1.5
PROM1-201ENST00000447510 GPR22Q99680 433 aa5.71□□□□□ -1.5
PROM1-201ENST00000447510 DOK1Q99704 481 aa5.71□□□□□ -1.5
PROM1-201ENST00000447510 TUBA1CQ9BQE3 449 aa5.71□□□□□ -1.5
PROM1-201ENST00000447510 RERGLQ9H628 205 aa5.71□□□□□ -1.5
PROM1-201ENST00000447510 GPN2Q9H9Y4 310 aaPredicted RBP5.71□□□□□ -1.5
PROM1-201ENST00000447510 EXOSC4Q9NPD3 245 aaKnown RBP5.71□□□□□ -1.5
PROM1-201ENST00000447510 C8orf4Q9NR00 106 aa5.71□□□□□ -1.5
PROM1-201ENST00000447510 TM7SF3Q9NS93 570 aa5.71□□□□□ -1.5
PROM1-201ENST00000447510 ORC6Q9Y5N6 252 aa5.71□□□□□ -1.5
PROM1-201ENST00000447510 DENND4AQ7Z401 1863 aa5.7□□□□□ -1.5
PROM1-201ENST00000447510 TCRBV3S1A0A5B6 114 aa5.7□□□□□ -1.5
PROM1-201ENST00000447510 ISPDA4D126 451 aa5.7□□□□□ -1.5
PROM1-201ENST00000447510 GSAPA4D1B5 854 aa5.7□□□□□ -1.5
PROM1-201ENST00000447510 ISM1B1AKI9 464 aa5.7□□□□□ -1.5
PROM1-201ENST00000447510 TNFRSF10CO14798 259 aa5.7□□□□□ -1.5
PROM1-201ENST00000447510 ARPC2O15144 300 aa5.7□□□□□ -1.5
PROM1-201ENST00000447510 GSTA4O15217 222 aa5.7□□□□□ -1.5
PROM1-201ENST00000447510 SPINT1O43278 529 aa5.7□□□□□ -1.5
PROM1-201ENST00000447510 UPK1BO75841 260 aa5.7□□□□□ -1.5
PROM1-201ENST00000447510 SEC14L2O76054 403 aa5.7□□□□□ -1.5
PROM1-201ENST00000447510 SUPT7LO94864 414 aa5.7□□□□□ -1.5
PROM1-201ENST00000447510 ANXA5P08758 320 aa5.7□□□□□ -1.5
PROM1-201ENST00000447510 CBLP22681 906 aa5.7□□□□□ -1.5
PROM1-201ENST00000447510 CYP4F2P78329 520 aa5.7□□□□□ -1.5
PROM1-201ENST00000447510 CYP4F3Q08477 520 aa5.7□□□□□ -1.5
PROM1-201ENST00000447510 CDK10Q15131 360 aa5.7□□□□□ -1.5
PROM1-201ENST00000447510 HIST2H2ACQ16777 129 aaPredicted RBP5.7□□□□□ -1.5
PROM1-201ENST00000447510 AMZ1Q400G9 498 aa5.7□□□□□ -1.5
PROM1-201ENST00000447510 TBPL2Q6SJ96 375 aa5.7□□□□□ -1.5
PROM1-201ENST00000447510 MAMSTRQ6ZN01 415 aa5.7□□□□□ -1.5
PROM1-201ENST00000447510 ZDHHC13Q8IUH4 622 aa5.7□□□□□ -1.5
PROM1-201ENST00000447510 OR6Q1Q8NGQ2 317 aa5.7□□□□□ -1.5
PROM1-201ENST00000447510 PNPT1Q8TCS8 783 aaKnown RBP5.7□□□□□ -1.5
PROM1-201ENST00000447510 RHBDD1Q8TEB9 315 aa5.7□□□□□ -1.5
PROM1-201ENST00000447510 EEF1AKMT1Q8WVE0 214 aa5.7□□□□□ -1.5
PROM1-201ENST00000447510 GTF2H4Q92759 462 aa5.7□□□□□ -1.5
PROM1-201ENST00000447510 RAD51AP1Q96B01 352 aa5.7□□□□□ -1.5
PROM1-201ENST00000447510 FYTTD1Q96QD9 318 aaKnown RBP5.7□□□□□ -1.5
PROM1-201ENST00000447510 PHOX2BQ99453 314 aa5.7□□□□□ -1.5
PROM1-201ENST00000447510 TEX101Q9BY14 249 aa5.7□□□□□ -1.5
PROM1-201ENST00000447510 ALOXE3Q9BYJ1 711 aa5.7□□□□□ -1.5
PROM1-201ENST00000447510 DCSTAMPQ9H295 470 aa5.7□□□□□ -1.5
PROM1-201ENST00000447510 FSCN3Q9NQT6 498 aa5.7□□□□□ -1.5
PROM1-201ENST00000447510 CCM2LQ9NUG4 571 aaPredicted RBP5.7□□□□□ -1.5
PROM1-201ENST00000447510 ERVK13-1Q9NX77 482 aa5.7□□□□□ -1.5
PROM1-201ENST00000447510 DHRS7Q9Y394 339 aa5.7□□□□□ -1.5
PROM1-201ENST00000447510 PLEKHM1Q9Y4G2 1056 aa5.7□□□□□ -1.5
PROM1-201ENST00000447510 SNX11Q9Y5W9 270 aa5.7□□□□□ -1.5
PROM1-201ENST00000447510 DNMT3AQ9Y6K1 912 aaPredicted RBP5.7□□□□□ -1.5
PROM1-201ENST00000447510 SPTY2D1-AS1A0A0U1RR47 76 aa5.7□□□□□ -1.5
PROM1-201ENST00000447510 PATE3B3GLJ2 98 aa5.7□□□□□ -1.5
PROM1-201ENST00000447510 LOC110117498-PIK3R3F6TDL0 507 aa5.7□□□□□ -1.5
PROM1-201ENST00000447510 NUPL2O15504 423 aaKnown RBP5.7□□□□□ -1.5
PROM1-201ENST00000447510 B3GALNT1O75752 331 aa5.7□□□□□ -1.5
PROM1-201ENST00000447510 RASAL1O95294 804 aa5.7□□□□□ -1.5
PROM1-201ENST00000447510 IGLV3-19P01714 112 aa5.7□□□□□ -1.5
PROM1-201ENST00000447510 CSF2P04141 144 aa5.7□□□□□ -1.5
PROM1-201ENST00000447510 MSL3P1P0C860 447 aa5.7□□□□□ -1.5
PROM1-201ENST00000447510 RPS3P23396 243 aaKnown RBP eCLIP5.7□□□□□ -1.5
PROM1-201ENST00000447510 CCT3P49368 545 aaKnown RBP5.7□□□□□ -1.5
PROM1-201ENST00000447510 MAPK12P53778 367 aa5.7□□□□□ -1.5
PROM1-201ENST00000447510 CDH13P55290 713 aa5.7□□□□□ -1.5
PROM1-201ENST00000447510 CHRNEQ04844 493 aa5.7□□□□□ -1.5
PROM1-201ENST00000447510 NPTX1Q15818 432 aa5.7□□□□□ -1.5
PROM1-201ENST00000447510 RBBP7Q16576 425 aa5.7□□□□□ -1.5
PROM1-201ENST00000447510 ALG11Q2TAA5 492 aa5.7□□□□□ -1.5
PROM1-201ENST00000447510 PLEKHS1Q5SXH7 462 aa5.7□□□□□ -1.5
PROM1-201ENST00000447510 AGAP6Q5VW22 663 aa5.7□□□□□ -1.5
PROM1-201ENST00000447510 GLYATQ6IB77 296 aa5.7□□□□□ -1.5
PROM1-201ENST00000447510 C16orf62Q7Z3J2 963 aa5.7□□□□□ -1.5
PROM1-201ENST00000447510 ZNF687Q8N1G0 1237 aa5.7□□□□□ -1.5
PROM1-201ENST00000447510 METTL4Q8N3J2 472 aa5.7□□□□□ -1.5
PROM1-201ENST00000447510 FAM109AQ8N4B1 249 aa5.7□□□□□ -1.5
PROM1-201ENST00000447510 FBXO39Q8N4B4 442 aa5.7□□□□□ -1.5
PROM1-201ENST00000447510 SVOPQ8N4V2 548 aa5.7□□□□□ -1.5
PROM1-201ENST00000447510 CPSF7Q8N684 471 aaKnown RBP5.7□□□□□ -1.5
PROM1-201ENST00000447510 C7orf57Q8NEG2 295 aa5.7□□□□□ -1.5
PROM1-201ENST00000447510 ACVR1CQ8NER5 493 aa5.7□□□□□ -1.5
PROM1-201ENST00000447510 OR8H1Q8NGG4 311 aa5.7□□□□□ -1.5
PROM1-201ENST00000447510 ZDHHC1Q8WTX9 485 aa5.7□□□□□ -1.5
PROM1-201ENST00000447510 TMEM74Q96NL1 305 aa5.7□□□□□ -1.5
PROM1-201ENST00000447510 AGAP4Q96P64 663 aa5.7□□□□□ -1.5
PROM1-201ENST00000447510 ELF4Q99607 663 aaPredicted RBP5.7□□□□□ -1.5
PROM1-201ENST00000447510 AMBNQ9NP70 447 aa5.7□□□□□ -1.5
PROM1-201ENST00000447510 RASSF1Q9NS23 344 aa5.7□□□□□ -1.5
PROM1-201ENST00000447510 PAK1IP1Q9NWT1 392 aaPredicted RBP5.7□□□□□ -1.5
PROM1-201ENST00000447510 NFKBIL1Q9UBC1 381 aaPredicted RBP5.7□□□□□ -1.5
PROM1-201ENST00000447510 VTI1BQ9UEU0 232 aa5.7□□□□□ -1.5
PROM1-201ENST00000447510 NUFIP1Q9UHK0 495 aaKnown RBP5.7□□□□□ -1.5
PROM1-201ENST00000447510 HEBP2Q9Y5Z4 205 aa5.7□□□□□ -1.5
PROM1-201ENST00000447510 EFCAB9A8MZ26 197 aa5.7□□□□□ -1.5
PROM1-201ENST00000447510 B8ZZF3 427 aa5.7□□□□□ -1.5
PROM1-201ENST00000447510 ERVH48-1M5A8F1 160 aa5.7□□□□□ -1.5
PROM1-201ENST00000447510 KCNJ13O60928 360 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms