RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 CYC1P08574 325 aa13.94□□□□□ -0.18
HDAC4-204ENST00000446876 NUDT17P0C025 328 aa13.94□□□□□ -0.18
HDAC4-204ENST00000446876 TAC1P20366 129 aa13.94□□□□□ -0.18
HDAC4-204ENST00000446876 ZNF10P21506 573 aaPredicted RBP13.94□□□□□ -0.18
HDAC4-204ENST00000446876 SERPINB1P30740 379 aa13.94□□□□□ -0.18
HDAC4-204ENST00000446876 CASRP41180 1078 aa13.94□□□□□ -0.18
HDAC4-204ENST00000446876 LIM2P55344 173 aa13.94□□□□□ -0.18
HDAC4-204ENST00000446876 RAB38P57729 211 aa13.94□□□□□ -0.18
HDAC4-204ENST00000446876 TLE1Q04724 770 aa13.94□□□□□ -0.18
HDAC4-204ENST00000446876 TGM3Q08188 693 aa13.94□□□□□ -0.18
HDAC4-204ENST00000446876 UNC50Q53HI1 259 aa13.94□□□□□ -0.18
HDAC4-204ENST00000446876 KHDRBS2Q5VWX1 349 aaKnown RBP13.94□□□□□ -0.18
HDAC4-204ENST00000446876 EMBQ6PCB8 327 aa13.94□□□□□ -0.18
HDAC4-204ENST00000446876 PAPD4Q6PIY7 484 aaKnown RBP13.94□□□□□ -0.18
HDAC4-204ENST00000446876 QSOX2Q6ZRP7 698 aa13.94□□□□□ -0.18
HDAC4-204ENST00000446876 LINC00696Q6ZRV3 163 aa13.94□□□□□ -0.18
HDAC4-204ENST00000446876 LCA5Q86VQ0 697 aa13.94□□□□□ -0.18
HDAC4-204ENST00000446876 C4orf33Q8N1A6 199 aa13.94□□□□□ -0.18
HDAC4-204ENST00000446876 SIRT6Q8N6T7 355 aa13.94□□□□□ -0.18
HDAC4-204ENST00000446876 OR4F6Q8NGB9 312 aa13.94□□□□□ -0.18
HDAC4-204ENST00000446876 WDR20Q8TBZ3 569 aa13.94□□□□□ -0.18
HDAC4-204ENST00000446876 TRPC4APQ8TEL6 797 aa13.94□□□□□ -0.18
HDAC4-204ENST00000446876 CAVIN3Q969G5 261 aa13.94□□□□□ -0.18
HDAC4-204ENST00000446876 CMTM7Q96FZ5 175 aa13.94□□□□□ -0.18
HDAC4-204ENST00000446876 MAGEB10Q96LZ2 347 aaPredicted RBP13.94□□□□□ -0.18
HDAC4-204ENST00000446876 KCNC2Q96PR1 638 aa13.94□□□□□ -0.18
HDAC4-204ENST00000446876 SERINC2Q96SA4 455 aa13.94□□□□□ -0.18
HDAC4-204ENST00000446876 MAPKAP1Q9BPZ7 522 aa13.94□□□□□ -0.18
HDAC4-204ENST00000446876 TUBB6Q9BUF5 446 aa13.94□□□□□ -0.18
HDAC4-204ENST00000446876 NPLQ9BXD5 320 aaPredicted RBP13.94□□□□□ -0.18
HDAC4-204ENST00000446876 PPCSQ9HAB8 311 aa13.94□□□□□ -0.18
HDAC4-204ENST00000446876 CLK4Q9HAZ1 481 aaKnown RBP13.94□□□□□ -0.18
HDAC4-204ENST00000446876 NECTIN3Q9NQS3 549 aa13.94□□□□□ -0.18
HDAC4-204ENST00000446876 PTGFRNQ9P2B2 879 aa13.94□□□□□ -0.18
HDAC4-204ENST00000446876 PCDHGA11Q9Y5H2 935 aa13.94□□□□□ -0.18
HDAC4-204ENST00000446876 CSAG2Q9Y5P2 127 aa13.94□□□□□ -0.18
HDAC4-204ENST00000446876 FASNP49327 2511 aaKnown RBP13.93□□□□□ -0.18
HDAC4-204ENST00000446876 MYOCOSA0A1B0GUC4 107 aa13.93□□□□□ -0.18
HDAC4-204ENST00000446876 A8MUA0 341 aa13.93□□□□□ -0.18
HDAC4-204ENST00000446876 TGFBR3LH3BV60 316 aa13.93□□□□□ -0.18
HDAC4-204ENST00000446876 GLRA3O75311 464 aa13.93□□□□□ -0.18
HDAC4-204ENST00000446876 SERPINA7P05543 415 aa13.93□□□□□ -0.18
HDAC4-204ENST00000446876 ATP5F1P24539 256 aaPredicted RBP13.93□□□□□ -0.18
HDAC4-204ENST00000446876 ATP5A1P25705 553 aaKnown RBP13.93□□□□□ -0.18
HDAC4-204ENST00000446876 HPDP32754 393 aaPredicted RBP13.93□□□□□ -0.18
HDAC4-204ENST00000446876 PIK3CBP42338 1070 aa13.93□□□□□ -0.18
HDAC4-204ENST00000446876 SSR2P43308 183 aa13.93□□□□□ -0.18
HDAC4-204ENST00000446876 RAP1GDS1P52306 607 aa13.93□□□□□ -0.18
HDAC4-204ENST00000446876 MLLT10P55197 1068 aa13.93□□□□□ -0.18
HDAC4-204ENST00000446876 OR4D2P58180 307 aa13.93□□□□□ -0.18
HDAC4-204ENST00000446876 HERVK_113P63132 956 aa13.93□□□□□ -0.18
HDAC4-204ENST00000446876 RASA2Q15283 850 aa13.93□□□□□ -0.18
HDAC4-204ENST00000446876 BTBD16Q32M84 506 aa13.93□□□□□ -0.18
HDAC4-204ENST00000446876 TMEM35AQ53FP2 167 aa13.93□□□□□ -0.18
HDAC4-204ENST00000446876 SGO1Q5FBB7 561 aa13.93□□□□□ -0.18
HDAC4-204ENST00000446876 ZNF678Q5SXM1 525 aa13.93□□□□□ -0.18
HDAC4-204ENST00000446876 DEPDC1Q5TB30 811 aa13.93□□□□□ -0.18
HDAC4-204ENST00000446876 AGAP7PQ5VUJ5 663 aa13.93□□□□□ -0.18
HDAC4-204ENST00000446876 B3GNTL1Q67FW5 361 aaPredicted RBP13.93□□□□□ -0.18
HDAC4-204ENST00000446876 SLC6A19Q695T7 634 aa13.93□□□□□ -0.18
HDAC4-204ENST00000446876 LETMD1Q6P1Q0 360 aa13.93□□□□□ -0.18
HDAC4-204ENST00000446876 CHSY3Q70JA7 882 aa13.93□□□□□ -0.18
HDAC4-204ENST00000446876 MILR1Q7Z6M3 343 aa13.93□□□□□ -0.18
HDAC4-204ENST00000446876 CLNKQ7Z7G1 428 aa13.93□□□□□ -0.18
HDAC4-204ENST00000446876 ACOT4Q8N9L9 421 aa13.93□□□□□ -0.18
HDAC4-204ENST00000446876 PSMF1Q92530 271 aa13.93□□□□□ -0.18
HDAC4-204ENST00000446876 REPS1Q96D71 796 aa13.93□□□□□ -0.18
HDAC4-204ENST00000446876 AGAP4Q96P64 663 aa13.93□□□□□ -0.18
HDAC4-204ENST00000446876 TBCDQ9BTW9 1192 aa13.93□□□□□ -0.18
HDAC4-204ENST00000446876 NTMT1Q9BV86 223 aa13.93□□□□□ -0.18
HDAC4-204ENST00000446876 C1QTNF3Q9BXJ4 246 aa13.93□□□□□ -0.18
HDAC4-204ENST00000446876 ERVK-6Q9BXR3 956 aa13.93□□□□□ -0.18
HDAC4-204ENST00000446876 PRDM9Q9NQV7 894 aa13.93□□□□□ -0.18
HDAC4-204ENST00000446876 C5AR2Q9P296 337 aa13.93□□□□□ -0.18
HDAC4-204ENST00000446876 DCDC2Q9UHG0 476 aa13.93□□□□□ -0.18
HDAC4-204ENST00000446876 ZNF225Q9UK10 706 aa13.93□□□□□ -0.18
HDAC4-204ENST00000446876 DAPP1Q9UN19 280 aa13.93□□□□□ -0.18
HDAC4-204ENST00000446876 IGKV3D-11A0A0A0MRZ8 115 aa13.92□□□□□ -0.18
HDAC4-204ENST00000446876 G3V2L1 256 aa13.92□□□□□ -0.18
HDAC4-204ENST00000446876 PLPP1O14494 284 aa13.92□□□□□ -0.18
HDAC4-204ENST00000446876 SUPT7LO94864 414 aa13.92□□□□□ -0.18
HDAC4-204ENST00000446876 OR4F21O95013 312 aa13.92□□□□□ -0.18
HDAC4-204ENST00000446876 PROCP04070 461 aa13.92□□□□□ -0.18
HDAC4-204ENST00000446876 KRT4P19013 534 aa13.92□□□□□ -0.18
HDAC4-204ENST00000446876 HIST1H1TP22492 207 aaPredicted RBP13.92□□□□□ -0.18
HDAC4-204ENST00000446876 PPP2R1BP30154 601 aa13.92□□□□□ -0.18
HDAC4-204ENST00000446876 PHEXP78562 749 aa13.92□□□□□ -0.18
HDAC4-204ENST00000446876 CLCQ05315 142 aa13.92□□□□□ -0.18
HDAC4-204ENST00000446876 ACTN3Q08043 901 aaPredicted RBP13.92□□□□□ -0.18
HDAC4-204ENST00000446876 IFFO1Q0D2I5 559 aa13.92□□□□□ -0.18
HDAC4-204ENST00000446876 AP5B1Q2VPB7 878 aa13.92□□□□□ -0.18
HDAC4-204ENST00000446876 PRR30Q53SZ7 412 aaPredicted RBP13.92□□□□□ -0.18
HDAC4-204ENST00000446876 TCHHL1Q5QJ38 904 aaPredicted RBP13.92□□□□□ -0.18
HDAC4-204ENST00000446876 TTC19Q6DKK2 380 aaPredicted RBP13.92□□□□□ -0.18
HDAC4-204ENST00000446876 JMJD6Q6NYC1 403 aaPredicted RBP13.92□□□□□ -0.18
HDAC4-204ENST00000446876 Q8NA96 180 aa13.92□□□□□ -0.18
HDAC4-204ENST00000446876 PPP4R1Q8TF05 950 aa13.92□□□□□ -0.18
HDAC4-204ENST00000446876 ZBTB9Q96C00 473 aa13.92□□□□□ -0.18
HDAC4-204ENST00000446876 PRTFDC1Q9NRG1 225 aa13.92□□□□□ -0.18
HDAC4-204ENST00000446876 FARSBQ9NSD9 589 aaKnown RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms