RNA–Protein interactions for RNA: ENST00000446317.1

SF3A3P1-201, Transcript of splicing factor 3a, subunit 3 pseudogene 1, humanhuman

BASIC

Gene SF3A3P1, Length 1,477 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3P1-201ENST00000446317 SLC5A2P31639 672 aa7.15□□□□□ -1.27
SF3A3P1-201ENST00000446317 ST13P50502 369 aaKnown RBP7.15□□□□□ -1.27
SF3A3P1-201ENST00000446317 EFNA3P52797 238 aa7.15□□□□□ -1.27
SF3A3P1-201ENST00000446317 DGKQP52824 942 aa7.15□□□□□ -1.27
SF3A3P1-201ENST00000446317 MAPK12P53778 367 aa7.15□□□□□ -1.27
SF3A3P1-201ENST00000446317 BTG2P78543 158 aa7.15□□□□□ -1.27
SF3A3P1-201ENST00000446317 PCDH1Q08174 1060 aa7.15□□□□□ -1.27
SF3A3P1-201ENST00000446317 C2orf80Q0P641 193 aa7.15□□□□□ -1.27
SF3A3P1-201ENST00000446317 PWP1Q13610 501 aa7.15□□□□□ -1.27
SF3A3P1-201ENST00000446317 NAA25Q14CX7 972 aa7.15□□□□□ -1.27
SF3A3P1-201ENST00000446317 MINDY4Q4G0A6 757 aa7.15□□□□□ -1.27
SF3A3P1-201ENST00000446317 TCTE1Q5JU00 501 aa7.15□□□□□ -1.27
SF3A3P1-201ENST00000446317 GK5Q6ZS86 529 aa7.15□□□□□ -1.27
SF3A3P1-201ENST00000446317 LARP4Q71RC2 724 aaKnown RBP eCLIP7.15□□□□□ -1.27
SF3A3P1-201ENST00000446317 COX15Q7KZN9 410 aa7.15□□□□□ -1.27
SF3A3P1-201ENST00000446317 ABHD13Q7L211 337 aa7.15□□□□□ -1.27
SF3A3P1-201ENST00000446317 ZNF771Q7L3S4 317 aaPredicted RBP7.15□□□□□ -1.27
SF3A3P1-201ENST00000446317 MTDHQ86UE4 582 aaKnown RBP7.15□□□□□ -1.27
SF3A3P1-201ENST00000446317 LAPTM4BQ86VI4 370 aa7.15□□□□□ -1.27
SF3A3P1-201ENST00000446317 TMPRSS12Q86WS5 348 aa7.15□□□□□ -1.27
SF3A3P1-201ENST00000446317 CLEC4FQ8N1N0 589 aa7.15□□□□□ -1.27
SF3A3P1-201ENST00000446317 CA13Q8N1Q1 262 aa7.15□□□□□ -1.27
SF3A3P1-201ENST00000446317 ARHGEF39Q8N4T4 335 aa7.15□□□□□ -1.27
SF3A3P1-201ENST00000446317 TTLQ8NG68 377 aa7.15□□□□□ -1.27
SF3A3P1-201ENST00000446317 OR7A2PQ8NGA2 310 aa7.15□□□□□ -1.27
SF3A3P1-201ENST00000446317 WDR36Q8NI36 951 aaKnown RBP7.15□□□□□ -1.27
SF3A3P1-201ENST00000446317 EXOSC8Q96B26 276 aaKnown RBP7.15□□□□□ -1.27
SF3A3P1-201ENST00000446317 LIN37Q96GY3 246 aaPredicted RBP7.15□□□□□ -1.27
SF3A3P1-201ENST00000446317 QRFPRQ96P65 431 aa7.15□□□□□ -1.27
SF3A3P1-201ENST00000446317 TAAR9Q96RI9 348 aa7.15□□□□□ -1.27
SF3A3P1-201ENST00000446317 CHST8Q9H2A9 424 aa7.15□□□□□ -1.27
SF3A3P1-201ENST00000446317 PFDN4Q9NQP4 134 aa7.15□□□□□ -1.27
SF3A3P1-201ENST00000446317 SLC22A11Q9NSA0 550 aa7.15□□□□□ -1.27
SF3A3P1-201ENST00000446317 ATG4BQ9Y4P1 393 aa7.15□□□□□ -1.27
SF3A3P1-201ENST00000446317 A0A0A6YYD5 115 aa7.14□□□□□ -1.27
SF3A3P1-201ENST00000446317 IGHV3-20A0A0C4DH32 117 aa7.14□□□□□ -1.27
SF3A3P1-201ENST00000446317 A0A1B0GX78 115 aa7.14□□□□□ -1.27
SF3A3P1-201ENST00000446317 NR5A2O00482 541 aa7.14□□□□□ -1.27
SF3A3P1-201ENST00000446317 FCHO1O14526 889 aa7.14□□□□□ -1.27
SF3A3P1-201ENST00000446317 DSCR3O14972 297 aa7.14□□□□□ -1.27
SF3A3P1-201ENST00000446317 UBDO15205 165 aa7.14□□□□□ -1.27
SF3A3P1-201ENST00000446317 TOX3O15405 576 aaPredicted RBP7.14□□□□□ -1.27
SF3A3P1-201ENST00000446317 SNX3O60493 162 aa7.14□□□□□ -1.27
SF3A3P1-201ENST00000446317 LDB3O75112 727 aa7.14□□□□□ -1.27
SF3A3P1-201ENST00000446317 CNOT3O75175 753 aaKnown RBP7.14□□□□□ -1.27
SF3A3P1-201ENST00000446317 ERAL1O75616 437 aaKnown RBP7.14□□□□□ -1.27
SF3A3P1-201ENST00000446317 MYO1DO94832 1006 aa7.14□□□□□ -1.27
SF3A3P1-201ENST00000446317 FKBP9O95302 570 aa7.14□□□□□ -1.27
SF3A3P1-201ENST00000446317 AIFM1O95831 613 aa7.14□□□□□ -1.27
SF3A3P1-201ENST00000446317 C1QCP02747 245 aa7.14□□□□□ -1.27
SF3A3P1-201ENST00000446317 SMIM10L1P0DMW3 83 aa7.14□□□□□ -1.27
SF3A3P1-201ENST00000446317 FGF5P12034 268 aa7.14□□□□□ -1.27
SF3A3P1-201ENST00000446317 ALOX15P16050 662 aaPredicted RBP7.14□□□□□ -1.27
SF3A3P1-201ENST00000446317 MAOAP21397 527 aa7.14□□□□□ -1.27
SF3A3P1-201ENST00000446317 CPN2P22792 545 aa7.14□□□□□ -1.27
SF3A3P1-201ENST00000446317 IL12AP29459 219 aa7.14□□□□□ -1.27
SF3A3P1-201ENST00000446317 RBMS1P29558 406 aaKnown RBP7.14□□□□□ -1.27
SF3A3P1-201ENST00000446317 FEN1P39748 380 aaKnown RBP7.14□□□□□ -1.27
SF3A3P1-201ENST00000446317 XCR1P46094 333 aa7.14□□□□□ -1.27
SF3A3P1-201ENST00000446317 AVPR1BP47901 424 aa7.14□□□□□ -1.27
SF3A3P1-201ENST00000446317 CPA2P48052 419 aa7.14□□□□□ -1.27
SF3A3P1-201ENST00000446317 MTTPP55157 894 aa7.14□□□□□ -1.27
SF3A3P1-201ENST00000446317 LIM2P55344 173 aa7.14□□□□□ -1.27
SF3A3P1-201ENST00000446317 NAA20P61599 178 aa7.14□□□□□ -1.27
SF3A3P1-201ENST00000446317 DUSP2Q05923 314 aa7.14□□□□□ -1.27
SF3A3P1-201ENST00000446317 KIAA0040Q15053 153 aa7.14□□□□□ -1.27
SF3A3P1-201ENST00000446317 RPS6KA2Q15349 733 aa7.14□□□□□ -1.27
SF3A3P1-201ENST00000446317 NDUFA9Q16795 377 aa7.14□□□□□ -1.27
SF3A3P1-201ENST00000446317 MUM1Q2TAK8 710 aa7.14□□□□□ -1.27
SF3A3P1-201ENST00000446317 TMEM35AQ53FP2 167 aa7.14□□□□□ -1.27
SF3A3P1-201ENST00000446317 ZNF385BQ569K4 471 aa7.14□□□□□ -1.27
SF3A3P1-201ENST00000446317 CEACAM20Q6UY09 585 aa7.14□□□□□ -1.27
SF3A3P1-201ENST00000446317 TMPRSS7Q7RTY8 843 aa7.14□□□□□ -1.27
SF3A3P1-201ENST00000446317 NUDT13Q86X67 352 aa7.14□□□□□ -1.27
SF3A3P1-201ENST00000446317 POU5F2Q8N7G0 328 aa7.14□□□□□ -1.27
SF3A3P1-201ENST00000446317 GBP7Q8N8V2 638 aaPredicted RBP7.14□□□□□ -1.27
SF3A3P1-201ENST00000446317 OR51Q1Q8NH59 317 aa7.14□□□□□ -1.27
SF3A3P1-201ENST00000446317 CT55Q8WUE5 264 aa7.14□□□□□ -1.27
SF3A3P1-201ENST00000446317 TSLPQ969D9 159 aa7.14□□□□□ -1.27
SF3A3P1-201ENST00000446317 CIDECQ96AQ7 238 aaPredicted RBP7.14□□□□□ -1.27
SF3A3P1-201ENST00000446317 PPWD1Q96BP3 646 aaKnown RBP7.14□□□□□ -1.27
SF3A3P1-201ENST00000446317 TM4SF18Q96CE8 201 aa7.14□□□□□ -1.27
SF3A3P1-201ENST00000446317 THAP11Q96EK4 314 aa7.14□□□□□ -1.27
SF3A3P1-201ENST00000446317 SMIM10Q96HG1 83 aa7.14□□□□□ -1.27
SF3A3P1-201ENST00000446317 SEC16BQ96JE7 1060 aa7.14□□□□□ -1.27
SF3A3P1-201ENST00000446317 MAGED4Q96JG8 741 aa7.14□□□□□ -1.27
SF3A3P1-201ENST00000446317 MAGEB10Q96LZ2 347 aaPredicted RBP7.14□□□□□ -1.27
SF3A3P1-201ENST00000446317 PPP3R2Q96LZ3 170 aa7.14□□□□□ -1.27
SF3A3P1-201ENST00000446317 ZNF285Q96NJ3 590 aa7.14□□□□□ -1.27
SF3A3P1-201ENST00000446317 KCNC2Q96PR1 638 aa7.14□□□□□ -1.27
SF3A3P1-201ENST00000446317 CENPKQ9BS16 269 aa7.14□□□□□ -1.27
SF3A3P1-201ENST00000446317 TMEM121BQ9BXQ6 578 aaPredicted RBP7.14□□□□□ -1.27
SF3A3P1-201ENST00000446317 NMUR2Q9GZQ4 415 aa7.14□□□□□ -1.27
SF3A3P1-201ENST00000446317 ANKRA2Q9H9E1 313 aa7.14□□□□□ -1.27
SF3A3P1-201ENST00000446317 BRF2Q9HAW0 419 aa7.14□□□□□ -1.27
SF3A3P1-201ENST00000446317 ZNF304Q9HCX3 659 aa7.14□□□□□ -1.27
SF3A3P1-201ENST00000446317 KLHL14Q9P2G3 628 aa7.14□□□□□ -1.27
SF3A3P1-201ENST00000446317 IFT80Q9P2H3 777 aaPredicted RBP7.14□□□□□ -1.27
SF3A3P1-201ENST00000446317 PPT2Q9UMR5 302 aa7.14□□□□□ -1.27
SF3A3P1-201ENST00000446317 EIF3LQ9Y262 564 aaKnown RBP7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms