RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 ZRANB3Q5FWF4 1079 aa2.33□□□□□ -2.04
HMGB1P18-201ENST00000438801 GRTP1Q5TC63 336 aa2.33□□□□□ -2.04
HMGB1P18-201ENST00000438801 KDM7AQ6ZMT4 941 aa2.33□□□□□ -2.04
HMGB1P18-201ENST00000438801 CFAP77Q6ZQR2 320 aa2.33□□□□□ -2.04
HMGB1P18-201ENST00000438801 RABEPKQ7Z6M1 372 aa2.33□□□□□ -2.04
HMGB1P18-201ENST00000438801 CERS3Q8IU89 383 aa2.33□□□□□ -2.04
HMGB1P18-201ENST00000438801 ZPLD1Q8TCW7 415 aa2.33□□□□□ -2.04
HMGB1P18-201ENST00000438801 RNF128Q8TEB7 428 aa2.33□□□□□ -2.04
HMGB1P18-201ENST00000438801 NRGNQ92686 78 aa2.33□□□□□ -2.04
HMGB1P18-201ENST00000438801 MOAP1Q96BY2 351 aa2.33□□□□□ -2.04
HMGB1P18-201ENST00000438801 FAM81BQ96LP2 452 aa2.33□□□□□ -2.04
HMGB1P18-201ENST00000438801 OR2A14Q96R47 310 aa2.33□□□□□ -2.04
HMGB1P18-201ENST00000438801 VN1R1Q9GZP7 353 aa2.33□□□□□ -2.04
HMGB1P18-201ENST00000438801 DNAJC18Q9H819 358 aa2.33□□□□□ -2.04
HMGB1P18-201ENST00000438801 GPR83Q9NYM4 423 aa2.33□□□□□ -2.04
HMGB1P18-201ENST00000438801 BCCIPQ9P287 314 aaKnown RBP eCLIP2.33□□□□□ -2.04
HMGB1P18-201ENST00000438801 PDP2Q9P2J9 529 aa2.33□□□□□ -2.04
HMGB1P18-201ENST00000438801 ZDHHC2Q9UIJ5 367 aa2.33□□□□□ -2.04
HMGB1P18-201ENST00000438801 PILRBQ9UKJ0 227 aa2.33□□□□□ -2.04
HMGB1P18-201ENST00000438801 CRYL1Q9Y2S2 319 aa2.33□□□□□ -2.04
HMGB1P18-201ENST00000438801 KLF2Q9Y5W3 355 aaPredicted RBP2.33□□□□□ -2.04
HMGB1P18-201ENST00000438801 LYVE1Q9Y5Y7 322 aa2.33□□□□□ -2.04
HMGB1P18-201ENST00000438801 SPEF2Q9C093 1822 aa2.33□□□□□ -2.04
HMGB1P18-201ENST00000438801 LOXHD1Q8IVV2 1947 aa2.32□□□□□ -2.04
HMGB1P18-201ENST00000438801 EFCAB7A8K855 629 aa2.32□□□□□ -2.04
HMGB1P18-201ENST00000438801 BCL2L11O43521 198 aa2.32□□□□□ -2.04
HMGB1P18-201ENST00000438801 MAGEC1O60732 1142 aa2.32□□□□□ -2.04
HMGB1P18-201ENST00000438801 DFFBO76075 338 aa2.32□□□□□ -2.04
HMGB1P18-201ENST00000438801 CCNDBP1O95273 360 aa2.32□□□□□ -2.04
HMGB1P18-201ENST00000438801 CLEC3BP05452 202 aa2.32□□□□□ -2.04
HMGB1P18-201ENST00000438801 ITIH1P19827 911 aa2.32□□□□□ -2.04
HMGB1P18-201ENST00000438801 CYP2A7P20853 494 aa2.32□□□□□ -2.04
HMGB1P18-201ENST00000438801 HTR1EP28566 365 aa2.32□□□□□ -2.04
HMGB1P18-201ENST00000438801 PAX9P55771 341 aa2.32□□□□□ -2.04
HMGB1P18-201ENST00000438801 RPS3AP61247 264 aaKnown RBP2.32□□□□□ -2.04
HMGB1P18-201ENST00000438801 CX3CL1P78423 397 aa2.32□□□□□ -2.04
HMGB1P18-201ENST00000438801 FOLH1Q04609 750 aa2.32□□□□□ -2.04
HMGB1P18-201ENST00000438801 PAX8Q06710 450 aa2.32□□□□□ -2.04
HMGB1P18-201ENST00000438801 CALCOCO2Q13137 446 aa2.32□□□□□ -2.04
HMGB1P18-201ENST00000438801 MDH1BQ5I0G3 518 aa2.32□□□□□ -2.04
HMGB1P18-201ENST00000438801 INTS11Q5TA45 600 aaKnown RBP2.32□□□□□ -2.04
HMGB1P18-201ENST00000438801 JADE1Q6IE81 842 aa2.32□□□□□ -2.04
HMGB1P18-201ENST00000438801 NCEH1Q6PIU2 408 aa2.32□□□□□ -2.04
HMGB1P18-201ENST00000438801 EXOC8Q8IYI6 725 aa2.32□□□□□ -2.04
HMGB1P18-201ENST00000438801 KIRREL3Q8IZU9 778 aa2.32□□□□□ -2.04
HMGB1P18-201ENST00000438801 CPXCR1Q8N123 301 aa2.32□□□□□ -2.04
HMGB1P18-201ENST00000438801 POM121L12Q8N7R1 296 aa2.32□□□□□ -2.04
HMGB1P18-201ENST00000438801 C3orf56Q8N813 242 aa2.32□□□□□ -2.04
HMGB1P18-201ENST00000438801 MRPL43Q8N983 215 aaKnown RBP2.32□□□□□ -2.04
HMGB1P18-201ENST00000438801 FAM133AQ8N9E0 248 aa2.32□□□□□ -2.04
HMGB1P18-201ENST00000438801 Q8NBF4 154 aa2.32□□□□□ -2.04
HMGB1P18-201ENST00000438801 PPFIBP2Q8ND30 876 aa2.32□□□□□ -2.04
HMGB1P18-201ENST00000438801 OR10G8Q8NGN5 311 aa2.32□□□□□ -2.04
HMGB1P18-201ENST00000438801 UBE2Q2Q8WVN8 375 aa2.32□□□□□ -2.04
HMGB1P18-201ENST00000438801 MRPS27Q92552 414 aaKnown RBP2.32□□□□□ -2.04
HMGB1P18-201ENST00000438801 PRCCQ92733 491 aaPredicted RBP2.32□□□□□ -2.04
HMGB1P18-201ENST00000438801 DNASE1L2Q92874 299 aa2.32□□□□□ -2.04
HMGB1P18-201ENST00000438801 TEKT1Q969V4 418 aa2.32□□□□□ -2.04
HMGB1P18-201ENST00000438801 PRICKLE1Q96MT3 831 aaPredicted RBP2.32□□□□□ -2.04
HMGB1P18-201ENST00000438801 FNBP1Q96RU3 617 aa2.32□□□□□ -2.04
HMGB1P18-201ENST00000438801 NCAPGQ9BPX3 1015 aa2.32□□□□□ -2.04
HMGB1P18-201ENST00000438801 MTG1Q9BT17 334 aaPredicted RBP2.32□□□□□ -2.04
HMGB1P18-201ENST00000438801 SPATC1LQ9H0A9 340 aa2.32□□□□□ -2.04
HMGB1P18-201ENST00000438801 PLK3Q9H4B4 646 aa2.32□□□□□ -2.04
HMGB1P18-201ENST00000438801 JMJD4Q9H9V9 463 aa2.32□□□□□ -2.04
HMGB1P18-201ENST00000438801 NENFQ9UMX5 172 aa2.32□□□□□ -2.04
HMGB1P18-201ENST00000438801 EXO1Q9UQ84 846 aaKnown RBP2.32□□□□□ -2.04
HMGB1P18-201ENST00000438801 WBP11Q9Y2W2 641 aaKnown RBP2.32□□□□□ -2.04
HMGB1P18-201ENST00000438801 ZFP37Q9Y6Q3 630 aaPredicted RBP2.32□□□□□ -2.04
HMGB1P18-201ENST00000438801 ROS1P08922 2347 aa2.31□□□□□ -2.04
HMGB1P18-201ENST00000438801 CSMD3Q7Z407 3707 aa2.31□□□□□ -2.04
HMGB1P18-201ENST00000438801 CEP192Q8TEP8 1941 aa2.31□□□□□ -2.04
HMGB1P18-201ENST00000438801 C15orf61A6NNL5 157 aa2.31□□□□□ -2.04
HMGB1P18-201ENST00000438801 C19orf81C9J6K1 198 aa2.31□□□□□ -2.04
HMGB1P18-201ENST00000438801 TO15178 435 aa2.31□□□□□ -2.04
HMGB1P18-201ENST00000438801 HS6ST1O60243 411 aa2.31□□□□□ -2.04
HMGB1P18-201ENST00000438801 APBB3O95704 486 aa2.31□□□□□ -2.04
HMGB1P18-201ENST00000438801 SRPRAP08240 638 aaKnown RBP2.31□□□□□ -2.04
HMGB1P18-201ENST00000438801 CDH2P19022 906 aaPredicted RBP2.31□□□□□ -2.04
HMGB1P18-201ENST00000438801 CCR9P51686 369 aa2.31□□□□□ -2.04
HMGB1P18-201ENST00000438801 DMPKQ09013 629 aa2.31□□□□□ -2.04
HMGB1P18-201ENST00000438801 ART3Q13508 389 aa2.31□□□□□ -2.04
HMGB1P18-201ENST00000438801 DHX8Q14562 1220 aaKnown RBP2.31□□□□□ -2.04
HMGB1P18-201ENST00000438801 WTAPQ15007 396 aa2.31□□□□□ -2.04
HMGB1P18-201ENST00000438801 HSP90AB4PQ58FF6 505 aa2.31□□□□□ -2.04
HMGB1P18-201ENST00000438801 GKAP1Q5VSY0 366 aaPredicted RBP2.31□□□□□ -2.04
HMGB1P18-201ENST00000438801 CCBE1Q6UXH8 406 aaPredicted RBP2.31□□□□□ -2.04
HMGB1P18-201ENST00000438801 HPS6Q86YV9 775 aa2.31□□□□□ -2.04
HMGB1P18-201ENST00000438801 C17orf47Q8NEP4 570 aa2.31□□□□□ -2.04
HMGB1P18-201ENST00000438801 HTR3CQ8WXA8 447 aa2.31□□□□□ -2.04
HMGB1P18-201ENST00000438801 GAL3ST4Q96RP7 486 aa2.31□□□□□ -2.04
HMGB1P18-201ENST00000438801 UBN1Q9NPG3 1134 aa2.31□□□□□ -2.04
HMGB1P18-201ENST00000438801 ASCL3Q9NQ33 180 aa2.31□□□□□ -2.04
HMGB1P18-201ENST00000438801 PAG1Q9NWQ8 432 aa2.31□□□□□ -2.04
HMGB1P18-201ENST00000438801 AMACRQ9UHK6 382 aa2.31□□□□□ -2.04
HMGB1P18-201ENST00000438801 TUBE1Q9UJT0 475 aa2.31□□□□□ -2.04
HMGB1P18-201ENST00000438801 GRID1Q9ULK0 1009 aa2.31□□□□□ -2.04
HMGB1P18-201ENST00000438801 CMAHPQ9Y471 501 aa2.31□□□□□ -2.04
HMGB1P18-201ENST00000438801 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP2.31□□□□□ -2.04
HMGB1P18-201ENST00000438801 PLCE1Q9P212 2302 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms