RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 KLHL31Q9H511 634 aa6.7□□□□□ -1.34
LSM3P3-201ENST00000436601 TMEM9BQ9NQ34 198 aa6.7□□□□□ -1.34
LSM3P3-201ENST00000436601 LHX9Q9NQ69 397 aa6.7□□□□□ -1.34
LSM3P3-201ENST00000436601 AIG1Q9NVV5 245 aa6.7□□□□□ -1.34
LSM3P3-201ENST00000436601 ASIC5Q9NY37 505 aa6.7□□□□□ -1.34
LSM3P3-201ENST00000436601 SEMA5BQ9P283 1151 aa6.7□□□□□ -1.34
LSM3P3-201ENST00000436601 ARMCX1Q9P291 453 aa6.7□□□□□ -1.34
LSM3P3-201ENST00000436601 PDP2Q9P2J9 529 aa6.7□□□□□ -1.34
LSM3P3-201ENST00000436601 DLGAP4Q9Y2H0 992 aa6.7□□□□□ -1.34
LSM3P3-201ENST00000436601 GPR45Q9Y5Y3 372 aa6.7□□□□□ -1.34
LSM3P3-201ENST00000436601 COPG1Q9Y678 874 aaKnown RBP6.7□□□□□ -1.34
LSM3P3-201ENST00000436601 MN1Q10571 1320 aaPredicted RBP6.7□□□□□ -1.34
LSM3P3-201ENST00000436601 THADAQ6YHU6 1953 aa6.69□□□□□ -1.34
LSM3P3-201ENST00000436601 A8MU76 341 aa6.69□□□□□ -1.34
LSM3P3-201ENST00000436601 CAPN14A8MX76 684 aa6.69□□□□□ -1.34
LSM3P3-201ENST00000436601 C4orf51C9J302 202 aa6.69□□□□□ -1.34
LSM3P3-201ENST00000436601 H0YGG7 62 aa6.69□□□□□ -1.34
LSM3P3-201ENST00000436601 NTN3O00634 580 aaPredicted RBP6.69□□□□□ -1.34
LSM3P3-201ENST00000436601 PLPP1O14494 284 aa6.69□□□□□ -1.34
LSM3P3-201ENST00000436601 ANKRD28O15084 1053 aa6.69□□□□□ -1.34
LSM3P3-201ENST00000436601 P2RX6O15547 441 aa6.69□□□□□ -1.34
LSM3P3-201ENST00000436601 RASSF9O75901 435 aa6.69□□□□□ -1.34
LSM3P3-201ENST00000436601 WISP1O95388 367 aa6.69□□□□□ -1.34
LSM3P3-201ENST00000436601 CPNE6O95741 557 aa6.69□□□□□ -1.34
LSM3P3-201ENST00000436601 TP53P04637 393 aaPredicted RBP6.69□□□□□ -1.34
LSM3P3-201ENST00000436601 SERPIND1P05546 499 aa6.69□□□□□ -1.34
LSM3P3-201ENST00000436601 G6PDP11413 515 aa6.69□□□□□ -1.34
LSM3P3-201ENST00000436601 BCKDHAP12694 445 aa6.69□□□□□ -1.34
LSM3P3-201ENST00000436601 GPX3P22352 226 aa6.69□□□□□ -1.34
LSM3P3-201ENST00000436601 ACP1P24666 158 aa6.69□□□□□ -1.34
LSM3P3-201ENST00000436601 TACR1P25103 407 aa6.69□□□□□ -1.34
LSM3P3-201ENST00000436601 BSGP35613 385 aa6.69□□□□□ -1.34
LSM3P3-201ENST00000436601 MRPL19P49406 292 aaKnown RBP6.69□□□□□ -1.34
LSM3P3-201ENST00000436601 PPM1FP49593 454 aaPredicted RBP6.69□□□□□ -1.34
LSM3P3-201ENST00000436601 ATP4BP51164 291 aa6.69□□□□□ -1.34
LSM3P3-201ENST00000436601 ARF3P61204 181 aaPredicted RBP6.69□□□□□ -1.34
LSM3P3-201ENST00000436601 RPL38P63173 70 aaKnown RBP6.69□□□□□ -1.34
LSM3P3-201ENST00000436601 RNF4P78317 190 aa6.69□□□□□ -1.34
LSM3P3-201ENST00000436601 PHEXP78562 749 aa6.69□□□□□ -1.34
LSM3P3-201ENST00000436601 KLF10Q13118 480 aa6.69□□□□□ -1.34
LSM3P3-201ENST00000436601 TMEM35AQ53FP2 167 aa6.69□□□□□ -1.34
LSM3P3-201ENST00000436601 TOR1AIP1Q5JTV8 583 aa6.69□□□□□ -1.34
LSM3P3-201ENST00000436601 CACHD1Q5VU97 1274 aa6.69□□□□□ -1.34
LSM3P3-201ENST00000436601 FOXB2Q5VYV0 432 aa6.69□□□□□ -1.34
LSM3P3-201ENST00000436601 FAM91A1Q658Y4 838 aa6.69□□□□□ -1.34
LSM3P3-201ENST00000436601 ANKRD34AQ69YU3 496 aa6.69□□□□□ -1.34
LSM3P3-201ENST00000436601 NOXRED1Q6NXP6 359 aa6.69□□□□□ -1.34
LSM3P3-201ENST00000436601 TMEM71Q6P5X7 295 aa6.69□□□□□ -1.34
LSM3P3-201ENST00000436601 IGF2-ASQ6U949 168 aa6.69□□□□□ -1.34
LSM3P3-201ENST00000436601 TRPM8Q7Z2W7 1104 aa6.69□□□□□ -1.34
LSM3P3-201ENST00000436601 DGLUCYQ7Z3D6 616 aa6.69□□□□□ -1.34
LSM3P3-201ENST00000436601 COMMD6Q7Z4G1 85 aa6.69□□□□□ -1.34
LSM3P3-201ENST00000436601 PRSS42Q7Z5A4 293 aa6.69□□□□□ -1.34
LSM3P3-201ENST00000436601 ASPGQ86U10 573 aa6.69□□□□□ -1.34
LSM3P3-201ENST00000436601 NAXDQ8IW45 347 aa6.69□□□□□ -1.34
LSM3P3-201ENST00000436601 METTL4Q8N3J2 472 aa6.69□□□□□ -1.34
LSM3P3-201ENST00000436601 TBC1D19Q8N5T2 526 aa6.69□□□□□ -1.34
LSM3P3-201ENST00000436601 C1orf52Q8N6N3 182 aaKnown RBP6.69□□□□□ -1.34
LSM3P3-201ENST00000436601 FNDC5Q8NAU1 212 aa6.69□□□□□ -1.34
LSM3P3-201ENST00000436601 TRPV3Q8NET8 790 aa6.69□□□□□ -1.34
LSM3P3-201ENST00000436601 TTLQ8NG68 377 aa6.69□□□□□ -1.34
LSM3P3-201ENST00000436601 WDR48Q8TAF3 677 aa6.69□□□□□ -1.34
LSM3P3-201ENST00000436601 NT5CQ8TCD5 201 aa6.69□□□□□ -1.34
LSM3P3-201ENST00000436601 SLC13A3Q8WWT9 602 aa6.69□□□□□ -1.34
LSM3P3-201ENST00000436601 ERP27Q96DN0 273 aa6.69□□□□□ -1.34
LSM3P3-201ENST00000436601 MS4A6EQ96DS6 147 aa6.69□□□□□ -1.34
LSM3P3-201ENST00000436601 METTL2AQ96IZ6 378 aaKnown RBP6.69□□□□□ -1.34
LSM3P3-201ENST00000436601 SLC45A3Q96JT2 553 aa6.69□□□□□ -1.34
LSM3P3-201ENST00000436601 SLC41A2Q96JW4 573 aa6.69□□□□□ -1.34
LSM3P3-201ENST00000436601 DPH2Q9BQC3 489 aaPredicted RBP6.69□□□□□ -1.34
LSM3P3-201ENST00000436601 SORBS1Q9BX66 1292 aaKnown RBP6.69□□□□□ -1.34
LSM3P3-201ENST00000436601 ZNF717Q9BY31 904 aaPredicted RBP6.69□□□□□ -1.34
LSM3P3-201ENST00000436601 CHRNA10Q9GZZ6 450 aa6.69□□□□□ -1.34
LSM3P3-201ENST00000436601 ACTL8Q9H568 366 aa6.69□□□□□ -1.34
LSM3P3-201ENST00000436601 SDR39U1Q9NRG7 319 aaPredicted RBP6.69□□□□□ -1.34
LSM3P3-201ENST00000436601 NMRK1Q9NWW6 199 aa6.69□□□□□ -1.34
LSM3P3-201ENST00000436601 SIRT5Q9NXA8 310 aa6.69□□□□□ -1.34
LSM3P3-201ENST00000436601 NOP53Q9NZM5 478 aaKnown RBP6.69□□□□□ -1.34
LSM3P3-201ENST00000436601 FTSJ1Q9UET6 329 aa6.69□□□□□ -1.34
LSM3P3-201ENST00000436601 TTC28Q96AY4 2481 aa6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 IGHV5-10-1A0A0J9YXX1 117 aa6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 PSMD12O00232 456 aaPredicted RBP6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 RTCAO00442 366 aaKnown RBP6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 EBAG9O00559 213 aa6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 TOX3O15405 576 aaPredicted RBP6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 NDUFS4O43181 175 aa6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 EEDO75530 441 aaKnown RBP6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 PPM1BO75688 479 aa6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 SEMA3DO95025 777 aa6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 ZBTB11O95625 1053 aaPredicted RBP6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 GBAP04062 536 aa6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 KLK1P06870 262 aa6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 GP1BAP07359 652 aa6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 ANKRD34CP0C6C1 535 aa6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 SMIM10L1P0DMW3 83 aa6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 T-ENOLP0DO92 83 aa6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 IDO1P14902 403 aa6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 NELFEP18615 380 aaKnown RBP6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 SDC1P18827 310 aa6.68□□□□□ -1.34
LSM3P3-201ENST00000436601 PIK3R1P27986 724 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms