RNA–Protein interactions for RNA: ENST00000420058.1

NFE4-201, Transcript of nuclear factor, erythroid 4, humanhuman

TSL 1 (best)

Gene NFE4, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFE4-201ENST00000420058 ZFP36L2P47974 494 aaKnown RBP13.21□□□□□ -0.29
NFE4-201ENST00000420058 VPS41P49754 854 aa13.21□□□□□ -0.29
NFE4-201ENST00000420058 SSR4P51571 173 aa13.21□□□□□ -0.29
NFE4-201ENST00000420058 SARNPP82979 210 aaKnown RBP13.21□□□□□ -0.29
NFE4-201ENST00000420058 REEP5Q00765 189 aa13.21□□□□□ -0.29
NFE4-201ENST00000420058 RGS1Q08116 209 aa13.21□□□□□ -0.29
NFE4-201ENST00000420058 CEBPEQ15744 281 aa13.21□□□□□ -0.29
NFE4-201ENST00000420058 ZNF750Q32MQ0 723 aa13.21□□□□□ -0.29
NFE4-201ENST00000420058 TTC27Q6P3X3 843 aa13.21□□□□□ -0.29
NFE4-201ENST00000420058 ARSKQ6UWY0 536 aa13.21□□□□□ -0.29
NFE4-201ENST00000420058 TRILQ7L0X0 811 aa13.21□□□□□ -0.29
NFE4-201ENST00000420058 LMNTD2Q8IXW0 634 aa13.21□□□□□ -0.29
NFE4-201ENST00000420058 C2CD4AQ8NCU7 369 aaPredicted RBP13.21□□□□□ -0.29
NFE4-201ENST00000420058 FBXL8Q96CD0 374 aa13.21□□□□□ -0.29
NFE4-201ENST00000420058 VMP1Q96GC9 406 aa13.21□□□□□ -0.29
NFE4-201ENST00000420058 TTTY12Q9BZ98 90 aa13.21□□□□□ -0.29
NFE4-201ENST00000420058 PNO1Q9NRX1 252 aaKnown RBP13.21□□□□□ -0.29
NFE4-201ENST00000420058 SAMD15Q9P1V8 674 aa13.21□□□□□ -0.29
NFE4-201ENST00000420058 GUCA1BQ9UMX6 200 aa13.21□□□□□ -0.29
NFE4-201ENST00000420058 MMACHCQ9Y4U1 282 aa13.21□□□□□ -0.29
NFE4-201ENST00000420058 COL6A5A8TX70 2615 aa13.21□□□□□ -0.3
NFE4-201ENST00000420058 A0A1B0GTL3 188 aa13.2□□□□□ -0.3
NFE4-201ENST00000420058 G3V3Y1 287 aa13.2□□□□□ -0.3
NFE4-201ENST00000420058 GOLGA8MH3BSY2 632 aa13.2□□□□□ -0.3
NFE4-201ENST00000420058 ZFAND5O76080 213 aa13.2□□□□□ -0.3
NFE4-201ENST00000420058 TBX6O95947 436 aaPredicted RBP13.2□□□□□ -0.3
NFE4-201ENST00000420058 SERPINA6P08185 405 aa13.2□□□□□ -0.3
NFE4-201ENST00000420058 CELA3AP09093 270 aa13.2□□□□□ -0.3
NFE4-201ENST00000420058 SOX3P41225 446 aa13.2□□□□□ -0.3
NFE4-201ENST00000420058 SKP1P63208 163 aa13.2□□□□□ -0.3
NFE4-201ENST00000420058 ADAM8P78325 824 aa13.2□□□□□ -0.3
NFE4-201ENST00000420058 CSHL1Q14406 222 aa13.2□□□□□ -0.3
NFE4-201ENST00000420058 LRRC8EQ6NSJ5 796 aa13.2□□□□□ -0.3
NFE4-201ENST00000420058 ZNF585AQ6P3V2 769 aa13.2□□□□□ -0.3
NFE4-201ENST00000420058 PAOXQ6QHF9 649 aa13.2□□□□□ -0.3
NFE4-201ENST00000420058 IL20RBQ6UXL0 311 aa13.2□□□□□ -0.3
NFE4-201ENST00000420058 ZZZ3Q8IYH5 903 aa13.2□□□□□ -0.3
NFE4-201ENST00000420058 TXLNBQ8N3L3 684 aa13.2□□□□□ -0.3
NFE4-201ENST00000420058 TMEM251Q8N6I4 163 aa13.2□□□□□ -0.3
NFE4-201ENST00000420058 CHDHQ8NE62 594 aaPredicted RBP13.2□□□□□ -0.3
NFE4-201ENST00000420058 OR10Q1Q8NGQ4 319 aa13.2□□□□□ -0.3
NFE4-201ENST00000420058 SLC5A11Q8WWX8 675 aa13.2□□□□□ -0.3
NFE4-201ENST00000420058 LINGO1Q96FE5 620 aa13.2□□□□□ -0.3
NFE4-201ENST00000420058 RASL10BQ96S79 203 aa13.2□□□□□ -0.3
NFE4-201ENST00000420058 SMC6Q96SB8 1091 aa13.2□□□□□ -0.3
NFE4-201ENST00000420058 GPATCH1Q9BRR8 931 aaKnown RBP13.2□□□□□ -0.3
NFE4-201ENST00000420058 CNPPD1Q9BV87 410 aa13.2□□□□□ -0.3
NFE4-201ENST00000420058 POLDIP3Q9BY77 421 aaKnown RBP13.2□□□□□ -0.3
NFE4-201ENST00000420058 SLC24A3Q9HC58 644 aa13.2□□□□□ -0.3
NFE4-201ENST00000420058 RASSF1Q9NS23 344 aa13.2□□□□□ -0.3
NFE4-201ENST00000420058 IARS2Q9NSE4 1012 aaKnown RBP13.2□□□□□ -0.3
NFE4-201ENST00000420058 ARL15Q9NXU5 204 aa13.2□□□□□ -0.3
NFE4-201ENST00000420058 MYOTQ9UBF9 498 aa13.2□□□□□ -0.3
NFE4-201ENST00000420058 PLEKHA6Q9Y2H5 1048 aa13.2□□□□□ -0.3
NFE4-201ENST00000420058 OR14I1A6ND48 311 aa13.19□□□□□ -0.3
NFE4-201ENST00000420058 A8MVJ9 347 aa13.19□□□□□ -0.3
NFE4-201ENST00000420058 PSMD12O00232 456 aaPredicted RBP13.19□□□□□ -0.3
NFE4-201ENST00000420058 AHSGP02765 367 aa13.19□□□□□ -0.3
NFE4-201ENST00000420058 HIST1H2AGP0C0S8 130 aaPredicted RBP13.19□□□□□ -0.3
NFE4-201ENST00000420058 FOSL1P15407 271 aa13.19□□□□□ -0.3
NFE4-201ENST00000420058 HIST1H2ADP20671 130 aa13.19□□□□□ -0.3
NFE4-201ENST00000420058 CNR1P21554 472 aa13.19□□□□□ -0.3
NFE4-201ENST00000420058 MAGEA5P43359 124 aa13.19□□□□□ -0.3
NFE4-201ENST00000420058 RGS4P49798 205 aa13.19□□□□□ -0.3
NFE4-201ENST00000420058 HYAL4Q2M3T9 481 aa13.19□□□□□ -0.3
NFE4-201ENST00000420058 NXPE4Q6UWF7 544 aa13.19□□□□□ -0.3
NFE4-201ENST00000420058 B3GNT6Q6ZMB0 384 aa13.19□□□□□ -0.3
NFE4-201ENST00000420058 RGS9BPQ6ZS82 235 aa13.19□□□□□ -0.3
NFE4-201ENST00000420058 SEM1Q6ZVN7 128 aa13.19□□□□□ -0.3
NFE4-201ENST00000420058 MYO1HQ8N1T3 1032 aa13.19□□□□□ -0.3
NFE4-201ENST00000420058 ZNF321PQ8N8H1 164 aa13.19□□□□□ -0.3
NFE4-201ENST00000420058 ARMC2Q8NEN0 867 aa13.19□□□□□ -0.3
NFE4-201ENST00000420058 TRPV3Q8NET8 790 aa13.19□□□□□ -0.3
NFE4-201ENST00000420058 CALML6Q8TD86 181 aa13.19□□□□□ -0.3
NFE4-201ENST00000420058 SCYL1Q96KG9 808 aa13.19□□□□□ -0.3
NFE4-201ENST00000420058 HIST1H2AHQ96KK5 128 aa13.19□□□□□ -0.3
NFE4-201ENST00000420058 TSNARE1Q96NA8 513 aa13.19□□□□□ -0.3
NFE4-201ENST00000420058 HIST1H2AJQ99878 128 aa13.19□□□□□ -0.3
NFE4-201ENST00000420058 H2AFJQ9BTM1 129 aa13.19□□□□□ -0.3
NFE4-201ENST00000420058 RBSNQ9H1K0 784 aa13.19□□□□□ -0.3
NFE4-201ENST00000420058 XAB2Q9HCS7 855 aaKnown RBP13.19□□□□□ -0.3
NFE4-201ENST00000420058 SEMA4BQ9NPR2 832 aaPredicted RBP13.19□□□□□ -0.3
NFE4-201ENST00000420058 HPF1Q9NWY4 346 aa13.19□□□□□ -0.3
NFE4-201ENST00000420058 TAS2R13Q9NYV9 303 aa13.19□□□□□ -0.3
NFE4-201ENST00000420058 CRIM1Q9NZV1 1036 aa13.19□□□□□ -0.3
NFE4-201ENST00000420058 ERVK-11Q9UQG0 969 aa13.19□□□□□ -0.3
NFE4-201ENST00000420058 ATRQ13535 2644 aa13.18□□□□□ -0.3
NFE4-201ENST00000420058 WWP2O00308 870 aa13.18□□□□□ -0.3
NFE4-201ENST00000420058 SYT5O00445 386 aa13.18□□□□□ -0.3
NFE4-201ENST00000420058 CYR61O00622 381 aa13.18□□□□□ -0.3
NFE4-201ENST00000420058 AQP7O14520 342 aa13.18□□□□□ -0.3
NFE4-201ENST00000420058 BCKDKO14874 412 aa13.18□□□□□ -0.3
NFE4-201ENST00000420058 KRT14P02533 472 aa13.18□□□□□ -0.3
NFE4-201ENST00000420058 ENDOUP21128 410 aaKnown RBP13.18□□□□□ -0.3
NFE4-201ENST00000420058 AP1S2P56377 157 aa13.18□□□□□ -0.3
NFE4-201ENST00000420058 HSD17B7P56937 341 aa13.18□□□□□ -0.3
NFE4-201ENST00000420058 BTN3A2P78410 334 aa13.18□□□□□ -0.3
NFE4-201ENST00000420058 PLGLB1Q02325 96 aa13.18□□□□□ -0.3
NFE4-201ENST00000420058 TOR1AIP1Q5JTV8 583 aa13.18□□□□□ -0.3
NFE4-201ENST00000420058 HECTD2Q5U5R9 776 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms