RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 H3F3CQ6NXT2 135 aa14.38□□□□□ -0.11
NUP50-204ENST00000417702 ABHD17CQ6PCB6 329 aa14.38□□□□□ -0.11
NUP50-204ENST00000417702 VN1R5Q7Z5H4 357 aa14.38□□□□□ -0.11
NUP50-204ENST00000417702 TEX9Q8N6V9 391 aa14.38□□□□□ -0.11
NUP50-204ENST00000417702 AMER2Q8N7J2 671 aa14.38□□□□□ -0.11
NUP50-204ENST00000417702 PRR7Q8TB68 274 aa14.38□□□□□ -0.11
NUP50-204ENST00000417702 GRHL3Q8TE85 626 aa14.38□□□□□ -0.11
NUP50-204ENST00000417702 QRFPRQ96P65 431 aa14.38□□□□□ -0.11
NUP50-204ENST00000417702 SERINC2Q96SA4 455 aa14.38□□□□□ -0.11
NUP50-204ENST00000417702 ROGDIQ9GZN7 287 aa14.38□□□□□ -0.11
NUP50-204ENST00000417702 NFU1Q9UMS0 254 aa14.38□□□□□ -0.11
NUP50-204ENST00000417702 MRPS33Q9Y291 106 aaKnown RBP14.38□□□□□ -0.11
NUP50-204ENST00000417702 NTNG1Q9Y2I2 539 aa14.38□□□□□ -0.11
NUP50-204ENST00000417702 TNPO3Q9Y5L0 923 aaKnown RBP14.38□□□□□ -0.11
NUP50-204ENST00000417702 HIVEP3Q5T1R4 2406 aa14.38□□□□□ -0.11
NUP50-204ENST00000417702 SPTAN1Q13813 2472 aaKnown RBP14.37□□□□□ -0.11
NUP50-204ENST00000417702 TCRBV16S1A1N1A0A5B0 115 aa14.37□□□□□ -0.11
NUP50-204ENST00000417702 RBP1P09455 135 aa14.37□□□□□ -0.11
NUP50-204ENST00000417702 PCDH1Q08174 1060 aa14.37□□□□□ -0.11
NUP50-204ENST00000417702 E2F2Q14209 437 aa14.37□□□□□ -0.11
NUP50-204ENST00000417702 NAA30Q147X3 362 aaPredicted RBP14.37□□□□□ -0.11
NUP50-204ENST00000417702 INAQ16352 499 aa14.37□□□□□ -0.11
NUP50-204ENST00000417702 TMEM35AQ53FP2 167 aa14.37□□□□□ -0.11
NUP50-204ENST00000417702 TEX35Q5T0J7 233 aa14.37□□□□□ -0.11
NUP50-204ENST00000417702 FCRLBQ6BAA4 426 aa14.37□□□□□ -0.11
NUP50-204ENST00000417702 ADNP2Q6IQ32 1131 aa14.37□□□□□ -0.11
NUP50-204ENST00000417702 CHSY3Q70JA7 882 aa14.37□□□□□ -0.11
NUP50-204ENST00000417702 MYLK4Q86YV6 388 aaPredicted RBP14.37□□□□□ -0.11
NUP50-204ENST00000417702 BCORP1Q8N888 145 aa14.37□□□□□ -0.11
NUP50-204ENST00000417702 LRRN4CLQ8ND94 238 aa14.37□□□□□ -0.11
NUP50-204ENST00000417702 UHMK1Q8TAS1 419 aaKnown RBP14.37□□□□□ -0.11
NUP50-204ENST00000417702 ZNF473Q8WTR7 871 aaKnown RBP14.37□□□□□ -0.11
NUP50-204ENST00000417702 FAR1Q8WVX9 515 aa14.37□□□□□ -0.11
NUP50-204ENST00000417702 GPR78Q96P69 363 aa14.37□□□□□ -0.11
NUP50-204ENST00000417702 KCNC2Q96PR1 638 aa14.37□□□□□ -0.11
NUP50-204ENST00000417702 F2RL3Q96RI0 385 aa14.37□□□□□ -0.11
NUP50-204ENST00000417702 PRTFDC1Q9NRG1 225 aa14.37□□□□□ -0.11
NUP50-204ENST00000417702 CPSF2Q9P2I0 782 aaKnown RBP14.37□□□□□ -0.11
NUP50-204ENST00000417702 ADGRE2Q9UHX3 823 aa14.37□□□□□ -0.11
NUP50-204ENST00000417702 ZNF180Q9UJW8 692 aa14.37□□□□□ -0.11
NUP50-204ENST00000417702 USP9XQ93008 2570 aaPredicted RBP14.37□□□□□ -0.11
NUP50-204ENST00000417702 IGKV3D-11A0A0A0MRZ8 115 aa14.36□□□□□ -0.11
NUP50-204ENST00000417702 SAGE2PA6NJ88 616 aa14.36□□□□□ -0.11
NUP50-204ENST00000417702 KLK8O60259 260 aa14.36□□□□□ -0.11
NUP50-204ENST00000417702 TBX6O95947 436 aaPredicted RBP14.36□□□□□ -0.11
NUP50-204ENST00000417702 CERS1P27544 350 aa14.36□□□□□ -0.11
NUP50-204ENST00000417702 DEKP35659 375 aaKnown RBP14.36□□□□□ -0.11
NUP50-204ENST00000417702 PIK3CGP48736 1102 aa14.36□□□□□ -0.11
NUP50-204ENST00000417702 HSD17B7P56937 341 aa14.36□□□□□ -0.11
NUP50-204ENST00000417702 SLC13A2Q13183 592 aa14.36□□□□□ -0.11
NUP50-204ENST00000417702 PCBP2Q15366 365 aaKnown RBP eCLIP14.36□□□□□ -0.11
NUP50-204ENST00000417702 TSNAXIP1Q2TAA8 658 aa14.36□□□□□ -0.11
NUP50-204ENST00000417702 LGSNQ5TDP6 509 aa14.36□□□□□ -0.11
NUP50-204ENST00000417702 GRHL2Q6ISB3 625 aa14.36□□□□□ -0.11
NUP50-204ENST00000417702 CRLF3Q8IUI8 442 aa14.36□□□□□ -0.11
NUP50-204ENST00000417702 ZNF595Q8IYB9 648 aa14.36□□□□□ -0.11
NUP50-204ENST00000417702 LAS2Q8IYD9 372 aa14.36□□□□□ -0.11
NUP50-204ENST00000417702 LGI4Q8N135 537 aa14.36□□□□□ -0.11
NUP50-204ENST00000417702 BEST3Q8N1M1 668 aa14.36□□□□□ -0.11
NUP50-204ENST00000417702 ST6GALNAC3Q8NDV1 305 aa14.36□□□□□ -0.11
NUP50-204ENST00000417702 OR7G3Q8NG95 312 aa14.36□□□□□ -0.11
NUP50-204ENST00000417702 ISL2Q96A47 359 aa14.36□□□□□ -0.11
NUP50-204ENST00000417702 CMTM7Q96FZ5 175 aa14.36□□□□□ -0.11
NUP50-204ENST00000417702 SCYL1Q96KG9 808 aa14.36□□□□□ -0.11
NUP50-204ENST00000417702 UTP23Q9BRU9 249 aaKnown RBP14.36□□□□□ -0.11
NUP50-204ENST00000417702 TBCDQ9BTW9 1192 aa14.36□□□□□ -0.11
NUP50-204ENST00000417702 MS4A8Q9BY19 250 aa14.36□□□□□ -0.11
NUP50-204ENST00000417702 ACTR8Q9H981 624 aa14.36□□□□□ -0.11
NUP50-204ENST00000417702 NECTIN3Q9NQS3 549 aa14.36□□□□□ -0.11
NUP50-204ENST00000417702 OLAHQ9NV23 265 aa14.36□□□□□ -0.11
NUP50-204ENST00000417702 TMCO1Q9UM00 188 aa14.36□□□□□ -0.11
NUP50-204ENST00000417702 DAPP1Q9UN19 280 aa14.36□□□□□ -0.11
NUP50-204ENST00000417702 SETXQ7Z333 2677 aaKnown RBP14.36□□□□□ -0.11
NUP50-204ENST00000417702 ZGRF1Q86YA3 2104 aa14.35□□□□□ -0.11
NUP50-204ENST00000417702 EXOC1LA0A1B0GW35 172 aa14.35□□□□□ -0.11
NUP50-204ENST00000417702 SYNDIG1LA6NDD5 238 aa14.35□□□□□ -0.11
NUP50-204ENST00000417702 A8MUA0 341 aa14.35□□□□□ -0.11
NUP50-204ENST00000417702 TRIM49D1C9J1S8 452 aa14.35□□□□□ -0.11
NUP50-204ENST00000417702 PRAMEF2O60811 474 aa14.35□□□□□ -0.11
NUP50-204ENST00000417702 TGFB1P01137 390 aa14.35□□□□□ -0.11
NUP50-204ENST00000417702 COL6A2P12110 1019 aa14.35□□□□□ -0.11
NUP50-204ENST00000417702 EDN3P14138 238 aa14.35□□□□□ -0.11
NUP50-204ENST00000417702 MAGEA12P43365 314 aa14.35□□□□□ -0.11
NUP50-204ENST00000417702 LIM2P55344 173 aa14.35□□□□□ -0.11
NUP50-204ENST00000417702 PHEXP78562 749 aa14.35□□□□□ -0.11
NUP50-204ENST00000417702 DDX39BQ13838 428 aaKnown RBP14.35□□□□□ -0.11
NUP50-204ENST00000417702 GTF2H2Q13888 395 aa14.35□□□□□ -0.11
NUP50-204ENST00000417702 AP5B1Q2VPB7 878 aa14.35□□□□□ -0.11
NUP50-204ENST00000417702 TECRLQ5HYJ1 363 aa14.35□□□□□ -0.11
NUP50-204ENST00000417702 LIPJQ5W064 366 aa14.35□□□□□ -0.11
NUP50-204ENST00000417702 GTF2H2CQ6P1K8 395 aa14.35□□□□□ -0.11
NUP50-204ENST00000417702 METTL2BQ6P1Q9 378 aaKnown RBP14.35□□□□□ -0.11
NUP50-204ENST00000417702 TRMT10CQ7L0Y3 403 aaKnown RBP14.35□□□□□ -0.11
NUP50-204ENST00000417702 SCUBE1Q8IWY4 988 aa14.35□□□□□ -0.11
NUP50-204ENST00000417702 PLD6Q8N2A8 252 aaKnown RBP14.35□□□□□ -0.11
NUP50-204ENST00000417702 FAM47BQ8NA70 645 aa14.35□□□□□ -0.11
NUP50-204ENST00000417702 ELP5Q8TE02 316 aa14.35□□□□□ -0.11
NUP50-204ENST00000417702 DCAKDQ8WVC6 231 aa14.35□□□□□ -0.11
NUP50-204ENST00000417702 REPS1Q96D71 796 aa14.35□□□□□ -0.11
NUP50-204ENST00000417702 CENPKQ9BS16 269 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms