RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 TDRPQ86YL5 185 aa16.91■□□□□ 0.3
VCP-202ENST00000417448 KLHDC8AQ8IYD2 350 aa16.91■□□□□ 0.3
VCP-202ENST00000417448 PRSS58Q8IYP2 241 aa16.91■□□□□ 0.3
VCP-202ENST00000417448 C4orf33Q8N1A6 199 aa16.91■□□□□ 0.3
VCP-202ENST00000417448 TCAIMQ8N3R3 496 aa16.91■□□□□ 0.3
VCP-202ENST00000417448 TMEM151AQ8N4L1 468 aa16.91■□□□□ 0.3
VCP-202ENST00000417448 PTGR2Q8N8N7 351 aaPredicted RBP16.91■□□□□ 0.3
VCP-202ENST00000417448 ABHD11Q8NFV4 315 aa16.91■□□□□ 0.3
VCP-202ENST00000417448 OR4K1Q8NGD4 311 aa16.91■□□□□ 0.3
VCP-202ENST00000417448 NRGNQ92686 78 aa16.91■□□□□ 0.3
VCP-202ENST00000417448 VPS50Q96JG6 964 aa16.91■□□□□ 0.3
VCP-202ENST00000417448 GSX1Q9H4S2 264 aaPredicted RBP16.91■□□□□ 0.3
VCP-202ENST00000417448 KCNE2Q9Y6J6 123 aa16.91■□□□□ 0.3
VCP-202ENST00000417448 NSG1A0A0A6YYJ2 146 aa16.9■□□□□ 0.3
VCP-202ENST00000417448 FFAR3O14843 346 aa16.9■□□□□ 0.3
VCP-202ENST00000417448 GPR42O15529 346 aa16.9■□□□□ 0.3
VCP-202ENST00000417448 ZNHIT1O43257 154 aa16.9■□□□□ 0.3
VCP-202ENST00000417448 SRPX2O60687 465 aaPredicted RBP16.9■□□□□ 0.3
VCP-202ENST00000417448 RBP1P09455 135 aa16.9■□□□□ 0.3
VCP-202ENST00000417448 NUDT17P0C025 328 aa16.9■□□□□ 0.3
VCP-202ENST00000417448 COL6A2P12110 1019 aa16.9■□□□□ 0.3
VCP-202ENST00000417448 RBBP5Q15291 538 aaKnown RBP16.9■□□□□ 0.3
VCP-202ENST00000417448 TCTE1Q5JU00 501 aa16.9■□□□□ 0.3
VCP-202ENST00000417448 CDKL4Q5MAI5 379 aa16.9■□□□□ 0.3
VCP-202ENST00000417448 ADNP2Q6IQ32 1131 aa16.9■□□□□ 0.3
VCP-202ENST00000417448 SH2D5Q6ZV89 423 aa16.9■□□□□ 0.3
VCP-202ENST00000417448 MREGQ8N565 214 aa16.9■□□□□ 0.3
VCP-202ENST00000417448 TEX9Q8N6V9 391 aa16.9■□□□□ 0.3
VCP-202ENST00000417448 TTC29Q8NA56 475 aaPredicted RBP16.9■□□□□ 0.3
VCP-202ENST00000417448 STT3BQ8TCJ2 826 aa16.9■□□□□ 0.3
VCP-202ENST00000417448 RERGQ96A58 199 aaPredicted RBP16.9■□□□□ 0.3
VCP-202ENST00000417448 CABS1Q96KC9 395 aa16.9■□□□□ 0.3
VCP-202ENST00000417448 C10orf90Q96M02 699 aa16.9■□□□□ 0.3
VCP-202ENST00000417448 TNFRSF10DQ9UBN6 386 aa16.9■□□□□ 0.3
VCP-202ENST00000417448 NSD1Q96L73 2696 aaPredicted RBP16.89■□□□□ 0.29
VCP-202ENST00000417448 FAM221AA4D161 298 aa16.89■□□□□ 0.29
VCP-202ENST00000417448 SYCE1LA8MT33 242 aa16.89■□□□□ 0.29
VCP-202ENST00000417448 CLGNO14967 610 aa16.89■□□□□ 0.29
VCP-202ENST00000417448 PRAMEF2O60811 474 aa16.89■□□□□ 0.29
VCP-202ENST00000417448 B3GALT4O96024 378 aa16.89■□□□□ 0.29
VCP-202ENST00000417448 SERPINA7P05543 415 aa16.89■□□□□ 0.29
VCP-202ENST00000417448 C1GALT1C1LP0DN25 315 aa16.89■□□□□ 0.29
VCP-202ENST00000417448 DRD2P14416 443 aa16.89■□□□□ 0.29
VCP-202ENST00000417448 HRH2P25021 359 aa16.89■□□□□ 0.29
VCP-202ENST00000417448 DNAJA1P31689 397 aaKnown RBP16.89■□□□□ 0.29
VCP-202ENST00000417448 RPS15AP62244 130 aaKnown RBP16.89■□□□□ 0.29
VCP-202ENST00000417448 REEP5Q00765 189 aa16.89■□□□□ 0.29
VCP-202ENST00000417448 DOC2AQ14183 400 aa16.89■□□□□ 0.29
VCP-202ENST00000417448 SLBPQ14493 270 aaKnown RBP eCLIP16.89■□□□□ 0.29
VCP-202ENST00000417448 GRM7Q14831 915 aa16.89■□□□□ 0.29
VCP-202ENST00000417448 NAA25Q14CX7 972 aa16.89■□□□□ 0.29
VCP-202ENST00000417448 SETDB1Q15047 1291 aa16.89■□□□□ 0.29
VCP-202ENST00000417448 PDK4Q16654 411 aa16.89■□□□□ 0.29
VCP-202ENST00000417448 TSNAXIP1Q2TAA8 658 aa16.89■□□□□ 0.29
VCP-202ENST00000417448 PRTGQ2VWP7 1150 aa16.89■□□□□ 0.29
VCP-202ENST00000417448 XKR6Q5GH73 641 aa16.89■□□□□ 0.29
VCP-202ENST00000417448 NDUFAF7Q7L592 441 aa16.89■□□□□ 0.29
VCP-202ENST00000417448 PRSS41Q7RTY9 318 aa16.89■□□□□ 0.29
VCP-202ENST00000417448 LAPTM4BQ86VI4 370 aa16.89■□□□□ 0.29
VCP-202ENST00000417448 TGIF2LYQ8IUE0 185 aa16.89■□□□□ 0.29
VCP-202ENST00000417448 SPPL2CQ8IUH8 684 aa16.89■□□□□ 0.29
VCP-202ENST00000417448 ANKRD53Q8N9V6 530 aa16.89■□□□□ 0.29
VCP-202ENST00000417448 MFSD9Q8NBP5 474 aa16.89■□□□□ 0.29
VCP-202ENST00000417448 KCT2Q8NC54 265 aa16.89■□□□□ 0.29
VCP-202ENST00000417448 ZCCHC10Q8TBK6 192 aa16.89■□□□□ 0.29
VCP-202ENST00000417448 MAGED4Q96JG8 741 aa16.89■□□□□ 0.29
VCP-202ENST00000417448 NSUN5Q96P11 429 aaKnown RBP16.89■□□□□ 0.29
VCP-202ENST00000417448 RNF32Q9H0A6 362 aa16.89■□□□□ 0.29
VCP-202ENST00000417448 TSPAN10Q9H1Z9 355 aaPredicted RBP16.89■□□□□ 0.29
VCP-202ENST00000417448 CNOT10Q9H9A5 744 aaKnown RBP16.89■□□□□ 0.29
VCP-202ENST00000417448 PELI2Q9HAT8 420 aa16.89■□□□□ 0.29
VCP-202ENST00000417448 OPTCQ9UBM4 332 aa16.89■□□□□ 0.29
VCP-202ENST00000417448 C3orf18Q9UK00 162 aa16.89■□□□□ 0.29
VCP-202ENST00000417448 EMCNQ9ULC0 261 aa16.89■□□□□ 0.29
VCP-202ENST00000417448 FITM1A5D6W6 292 aa16.88■□□□□ 0.29
VCP-202ENST00000417448 OR5H15A6NDH6 313 aa16.88■□□□□ 0.29
VCP-202ENST00000417448 K7EPI3 171 aa16.88■□□□□ 0.29
VCP-202ENST00000417448 KLK8O60259 260 aa16.88■□□□□ 0.29
VCP-202ENST00000417448 CDH16O75309 829 aa16.88■□□□□ 0.29
VCP-202ENST00000417448 BMP10O95393 424 aa16.88■□□□□ 0.29
VCP-202ENST00000417448 ZGLP1P0C6A0 271 aa16.88■□□□□ 0.29
VCP-202ENST00000417448 CREB1P16220 341 aa16.88■□□□□ 0.29
VCP-202ENST00000417448 IGFBP2P18065 325 aa16.88■□□□□ 0.29
VCP-202ENST00000417448 TSPAN8P19075 237 aa16.88■□□□□ 0.29
VCP-202ENST00000417448 GNAZP19086 355 aa16.88■□□□□ 0.29
VCP-202ENST00000417448 CD22P20273 847 aa16.88■□□□□ 0.29
VCP-202ENST00000417448 EEF1DP29692 281 aaKnown RBP16.88■□□□□ 0.29
VCP-202ENST00000417448 HNF4AP41235 474 aa16.88■□□□□ 0.29
VCP-202ENST00000417448 IST1P53990 364 aa16.88■□□□□ 0.29
VCP-202ENST00000417448 ALDH18A1P54886 795 aaKnown RBP16.88■□□□□ 0.29
VCP-202ENST00000417448 EEF1A2Q05639 463 aaKnown RBP16.88■□□□□ 0.29
VCP-202ENST00000417448 CHIT1Q13231 466 aa16.88■□□□□ 0.29
VCP-202ENST00000417448 YOD1Q5VVQ6 348 aaPredicted RBP16.88■□□□□ 0.29
VCP-202ENST00000417448 THAP3Q8WTV1 239 aaPredicted RBP16.88■□□□□ 0.29
VCP-202ENST00000417448 UBTD2Q8WUN7 234 aa16.88■□□□□ 0.29
VCP-202ENST00000417448 SLC13A3Q8WWT9 602 aa16.88■□□□□ 0.29
VCP-202ENST00000417448 GPR137Q96N19 417 aa16.88■□□□□ 0.29
VCP-202ENST00000417448 MRPL57Q9BQC6 102 aaKnown RBP16.88■□□□□ 0.29
VCP-202ENST00000417448 CXXC4Q9H2H0 198 aa16.88■□□□□ 0.29
VCP-202ENST00000417448 MRPL46Q9H2W6 279 aaKnown RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms