RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 LINC01555Q8NAE3 123 aa4.68□□□□□ -1.66
VPS41-205ENST00000414632 BBOF1Q8ND07 529 aa4.68□□□□□ -1.66
VPS41-205ENST00000414632 OR56A3Q8NH54 315 aa4.68□□□□□ -1.66
VPS41-205ENST00000414632 CD200R1Q8TD46 325 aa4.68□□□□□ -1.66
VPS41-205ENST00000414632 DENND1AQ8TEH3 1009 aa4.68□□□□□ -1.66
VPS41-205ENST00000414632 PYROXD1Q8WU10 500 aa4.68□□□□□ -1.66
VPS41-205ENST00000414632 EEF1AKMT1Q8WVE0 214 aa4.68□□□□□ -1.66
VPS41-205ENST00000414632 IFT81Q8WYA0 676 aa4.68□□□□□ -1.66
VPS41-205ENST00000414632 INPP5DQ92835 1189 aa4.68□□□□□ -1.66
VPS41-205ENST00000414632 LINGO1Q96FE5 620 aa4.68□□□□□ -1.66
VPS41-205ENST00000414632 FOPNLQ96NB1 174 aa4.68□□□□□ -1.66
VPS41-205ENST00000414632 GPHA2Q96T91 129 aa4.68□□□□□ -1.66
VPS41-205ENST00000414632 OLFM1Q99784 485 aa4.68□□□□□ -1.66
VPS41-205ENST00000414632 NAT9Q9BTE0 207 aa4.68□□□□□ -1.66
VPS41-205ENST00000414632 NDC1Q9BTX1 674 aa4.68□□□□□ -1.66
VPS41-205ENST00000414632 ACAT2Q9BWD1 397 aa4.68□□□□□ -1.66
VPS41-205ENST00000414632 SORBS1Q9BX66 1292 aaKnown RBP4.68□□□□□ -1.66
VPS41-205ENST00000414632 TMEM120AQ9BXJ8 343 aa4.68□□□□□ -1.66
VPS41-205ENST00000414632 ENKD1Q9H0I2 346 aa4.68□□□□□ -1.66
VPS41-205ENST00000414632 CHST8Q9H2A9 424 aa4.68□□□□□ -1.66
VPS41-205ENST00000414632 TFB2MQ9H5Q4 396 aaKnown RBP4.68□□□□□ -1.66
VPS41-205ENST00000414632 CAB39LQ9H9S4 337 aa4.68□□□□□ -1.66
VPS41-205ENST00000414632 BARX1Q9HBU1 254 aaPredicted RBP4.68□□□□□ -1.66
VPS41-205ENST00000414632 FAM60AQ9NP50 221 aa4.68□□□□□ -1.66
VPS41-205ENST00000414632 TBC1D23Q9NUY8 699 aa4.68□□□□□ -1.66
VPS41-205ENST00000414632 FAM53CQ9NYF3 392 aa4.68□□□□□ -1.66
VPS41-205ENST00000414632 EPHA6Q9UF33 1036 aa4.68□□□□□ -1.66
VPS41-205ENST00000414632 POLG2Q9UHN1 485 aa4.68□□□□□ -1.66
VPS41-205ENST00000414632 LNPEPQ9UIQ6 1025 aa4.68□□□□□ -1.66
VPS41-205ENST00000414632 TRMT6Q9UJA5 497 aaKnown RBP4.68□□□□□ -1.66
VPS41-205ENST00000414632 POMT2Q9UKY4 750 aa4.68□□□□□ -1.66
VPS41-205ENST00000414632 SLC45A2Q9UMX9 530 aa4.68□□□□□ -1.66
VPS41-205ENST00000414632 SCN2AQ99250 2005 aa4.68□□□□□ -1.66
VPS41-205ENST00000414632 PTPRQQ9UMZ3 2332 aa4.68□□□□□ -1.66
VPS41-205ENST00000414632 BOD1L1Q8NFC6 3051 aa4.67□□□□□ -1.66
VPS41-205ENST00000414632 SCN3AQ9NY46 2000 aa4.67□□□□□ -1.66
VPS41-205ENST00000414632 NUP210LQ5VU65 1888 aa4.67□□□□□ -1.66
VPS41-205ENST00000414632 KALRNO60229 2985 aa4.67□□□□□ -1.66
VPS41-205ENST00000414632 A0A087WV48 116 aa4.67□□□□□ -1.66
VPS41-205ENST00000414632 LOC101059948A0A1B0GTJ6 334 aa4.67□□□□□ -1.66
VPS41-205ENST00000414632 TCRBV9S1A1TA0A576 114 aa4.67□□□□□ -1.66
VPS41-205ENST00000414632 CTAGE15A4D2H0 777 aa4.67□□□□□ -1.66
VPS41-205ENST00000414632 CLCA1A8K7I4 914 aa4.67□□□□□ -1.66
VPS41-205ENST00000414632 C2orf74A8MZ97 194 aa4.67□□□□□ -1.66
VPS41-205ENST00000414632 TMEM150CB9EJG8 249 aa4.67□□□□□ -1.66
VPS41-205ENST00000414632 H3BMM5 538 aa4.67□□□□□ -1.66
VPS41-205ENST00000414632 STMND1H3BQB6 276 aa4.67□□□□□ -1.66
VPS41-205ENST00000414632 KIF2AO00139 706 aaPredicted RBP4.67□□□□□ -1.66
VPS41-205ENST00000414632 NVLO15381 856 aaKnown RBP4.67□□□□□ -1.66
VPS41-205ENST00000414632 PSIP1O75475 530 aaKnown RBP4.67□□□□□ -1.66
VPS41-205ENST00000414632 SPAG6O75602 509 aa4.67□□□□□ -1.66
VPS41-205ENST00000414632 DNAJB5O75953 348 aa4.67□□□□□ -1.66
VPS41-205ENST00000414632 STK17BO94768 372 aa4.67□□□□□ -1.66
VPS41-205ENST00000414632 UNC5CO95185 931 aa4.67□□□□□ -1.66
VPS41-205ENST00000414632 ZBTB11O95625 1053 aaPredicted RBP4.67□□□□□ -1.66
VPS41-205ENST00000414632 STATHP02808 62 aa4.67□□□□□ -1.66
VPS41-205ENST00000414632 RPN2P04844 631 aa4.67□□□□□ -1.66
VPS41-205ENST00000414632 RHOXF2BP0C7M4 288 aa4.67□□□□□ -1.66
VPS41-205ENST00000414632 CTAGE8P0CG41 777 aa4.67□□□□□ -1.66
VPS41-205ENST00000414632 LIFP15018 202 aa4.67□□□□□ -1.66
VPS41-205ENST00000414632 MAGP20916 626 aa4.67□□□□□ -1.66
VPS41-205ENST00000414632 CD9P21926 228 aa4.67□□□□□ -1.66
VPS41-205ENST00000414632 SERPINF1P36955 418 aa4.67□□□□□ -1.66
VPS41-205ENST00000414632 GRIA3P42263 894 aa4.67□□□□□ -1.66
VPS41-205ENST00000414632 MAGEA4P43358 317 aa4.67□□□□□ -1.66
VPS41-205ENST00000414632 RAB28P51157 221 aa4.67□□□□□ -1.66
VPS41-205ENST00000414632 ADARP55265 1226 aaKnown RBP4.67□□□□□ -1.66
VPS41-205ENST00000414632 UCP3P55916 312 aa4.67□□□□□ -1.66
VPS41-205ENST00000414632 GPX6P59796 221 aa4.67□□□□□ -1.66
VPS41-205ENST00000414632 ADAM8P78325 824 aa4.67□□□□□ -1.66
VPS41-205ENST00000414632 HSD11B2P80365 405 aa4.67□□□□□ -1.66
VPS41-205ENST00000414632 MXRA7P84157 204 aa4.67□□□□□ -1.66
VPS41-205ENST00000414632 PLOD1Q02809 727 aaPredicted RBP4.67□□□□□ -1.66
VPS41-205ENST00000414632 MRPL49Q13405 166 aaKnown RBP4.67□□□□□ -1.66
VPS41-205ENST00000414632 ZIC1Q15915 447 aa4.67□□□□□ -1.66
VPS41-205ENST00000414632 TTLL9Q3SXZ7 439 aa4.67□□□□□ -1.66
VPS41-205ENST00000414632 KBTBD12Q3ZCT8 623 aa4.67□□□□□ -1.66
VPS41-205ENST00000414632 ZMAT1Q5H9K5 638 aa4.67□□□□□ -1.66
VPS41-205ENST00000414632 MANEAQ5SRI9 462 aa4.67□□□□□ -1.66
VPS41-205ENST00000414632 FAM69BQ5VUD6 431 aa4.67□□□□□ -1.66
VPS41-205ENST00000414632 ARMC3Q5W041 872 aa4.67□□□□□ -1.66
VPS41-205ENST00000414632 PWWP2BQ6NUJ5 590 aa4.67□□□□□ -1.66
VPS41-205ENST00000414632 ZNF529Q6P280 563 aa4.67□□□□□ -1.66
VPS41-205ENST00000414632 FAM199XQ6PEV8 388 aaPredicted RBP4.67□□□□□ -1.66
VPS41-205ENST00000414632 TTC23LQ6PF05 361 aa4.67□□□□□ -1.66
VPS41-205ENST00000414632 CDHR3Q6ZTQ4 885 aa4.67□□□□□ -1.66
VPS41-205ENST00000414632 CTAGE6Q86UF2 777 aa4.67□□□□□ -1.66
VPS41-205ENST00000414632 PDSS2Q86YH6 399 aa4.67□□□□□ -1.66
VPS41-205ENST00000414632 TMEM126BQ8IUX1 230 aa4.67□□□□□ -1.66
VPS41-205ENST00000414632 CNTN4Q8IWV2 1026 aa4.67□□□□□ -1.66
VPS41-205ENST00000414632 CTAGE4Q8IX94 777 aa4.67□□□□□ -1.66
VPS41-205ENST00000414632 CTAGE3PQ8IX95 158 aa4.67□□□□□ -1.66
VPS41-205ENST00000414632 LMNTD2Q8IXW0 634 aa4.67□□□□□ -1.66
VPS41-205ENST00000414632 GSPT2Q8IYD1 628 aaKnown RBP4.67□□□□□ -1.66
VPS41-205ENST00000414632 MMGT1Q8N4V1 131 aa4.67□□□□□ -1.66
VPS41-205ENST00000414632 NLGN4YQ8NFZ3 816 aaPredicted RBP4.67□□□□□ -1.66
VPS41-205ENST00000414632 OR2L8Q8NGY9 312 aa4.67□□□□□ -1.66
VPS41-205ENST00000414632 OR1L3Q8NH93 324 aa4.67□□□□□ -1.66
VPS41-205ENST00000414632 KIF18AQ8NI77 898 aa4.67□□□□□ -1.66
VPS41-205ENST00000414632 FLVCR1-AS1Q8TAF5 88 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms