RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 ZNF483Q8TF39 744 aaPredicted RBP13.86□□□□□ -0.19
CHD1-202ENST00000414220 SREK1Q8WXA9 508 aaKnown RBP13.86□□□□□ -0.19
CHD1-202ENST00000414220 MTERF1Q99551 399 aaKnown RBP13.86□□□□□ -0.19
CHD1-202ENST00000414220 RBCK1Q9BYM8 510 aa13.86□□□□□ -0.19
CHD1-202ENST00000414220 DMRT3Q9NQL9 472 aa13.86□□□□□ -0.19
CHD1-202ENST00000414220 PRDM9Q9NQV7 894 aa13.86□□□□□ -0.19
CHD1-202ENST00000414220 MS4A12Q9NXJ0 267 aa13.86□□□□□ -0.19
CHD1-202ENST00000414220 TEKT2Q9UIF3 430 aa13.86□□□□□ -0.19
CHD1-202ENST00000414220 NBEAQ8NFP9 2946 aa13.86□□□□□ -0.19
CHD1-202ENST00000414220 ZFYVE26Q68DK2 2539 aa13.86□□□□□ -0.19
CHD1-202ENST00000414220 CACNA1GO43497 2377 aa13.85□□□□□ -0.19
CHD1-202ENST00000414220 OR7A17O14581 309 aa13.85□□□□□ -0.19
CHD1-202ENST00000414220 SLC28A2O43868 658 aa13.85□□□□□ -0.19
CHD1-202ENST00000414220 DLX3O60479 287 aa13.85□□□□□ -0.19
CHD1-202ENST00000414220 B3GALT4O96024 378 aa13.85□□□□□ -0.19
CHD1-202ENST00000414220 KRT6AP02538 564 aa13.85□□□□□ -0.19
CHD1-202ENST00000414220 KRT6BP04259 564 aa13.85□□□□□ -0.19
CHD1-202ENST00000414220 HIST1H1TP22492 207 aaPredicted RBP13.85□□□□□ -0.19
CHD1-202ENST00000414220 TLX1P31314 330 aaPredicted RBP13.85□□□□□ -0.19
CHD1-202ENST00000414220 KRT6CP48668 564 aa13.85□□□□□ -0.19
CHD1-202ENST00000414220 PRKAA2P54646 552 aa13.85□□□□□ -0.19
CHD1-202ENST00000414220 HSD17B7P56937 341 aa13.85□□□□□ -0.19
CHD1-202ENST00000414220 OR4D2P58180 307 aa13.85□□□□□ -0.19
CHD1-202ENST00000414220 RPS13P62277 151 aaKnown RBP13.85□□□□□ -0.19
CHD1-202ENST00000414220 RHAGQ02094 409 aa13.85□□□□□ -0.19
CHD1-202ENST00000414220 CUL3Q13618 768 aa13.85□□□□□ -0.19
CHD1-202ENST00000414220 RAPSNQ13702 412 aa13.85□□□□□ -0.19
CHD1-202ENST00000414220 CFAP157Q5JU67 520 aa13.85□□□□□ -0.19
CHD1-202ENST00000414220 FRG2Q64ET8 278 aa13.85□□□□□ -0.19
CHD1-202ENST00000414220 OR4C11Q6IEV9 310 aa13.85□□□□□ -0.19
CHD1-202ENST00000414220 PRICKLE2Q7Z3G6 844 aa13.85□□□□□ -0.19
CHD1-202ENST00000414220 ANKRD37Q7Z713 158 aa13.85□□□□□ -0.19
CHD1-202ENST00000414220 ZNF595Q8IYB9 648 aa13.85□□□□□ -0.19
CHD1-202ENST00000414220 CYP4X1Q8N118 509 aa13.85□□□□□ -0.19
CHD1-202ENST00000414220 OR4F6Q8NGB9 312 aa13.85□□□□□ -0.19
CHD1-202ENST00000414220 OR52B6Q8NGF0 335 aa13.85□□□□□ -0.19
CHD1-202ENST00000414220 OR2W6PQ8NHA6 318 aa13.85□□□□□ -0.19
CHD1-202ENST00000414220 TRPC4APQ8TEL6 797 aa13.85□□□□□ -0.19
CHD1-202ENST00000414220 CDK15Q96Q40 435 aa13.85□□□□□ -0.19
CHD1-202ENST00000414220 FRG2BQ96QU4 278 aa13.85□□□□□ -0.19
CHD1-202ENST00000414220 SMC6Q96SB8 1091 aa13.85□□□□□ -0.19
CHD1-202ENST00000414220 NUDT9Q9BW91 350 aa13.85□□□□□ -0.19
CHD1-202ENST00000414220 OR51B5Q9H339 312 aa13.85□□□□□ -0.19
CHD1-202ENST00000414220 LYRM4Q9HD34 91 aa13.85□□□□□ -0.19
CHD1-202ENST00000414220 PRDM7Q9NQW5 492 aa13.85□□□□□ -0.19
CHD1-202ENST00000414220 PRTFDC1Q9NRG1 225 aa13.85□□□□□ -0.19
CHD1-202ENST00000414220 LANCL2Q9NS86 450 aa13.85□□□□□ -0.19
CHD1-202ENST00000414220 SENP1Q9P0U3 644 aa13.85□□□□□ -0.19
CHD1-202ENST00000414220 PHF11Q9UIL8 331 aa13.85□□□□□ -0.19
CHD1-202ENST00000414220 PPT2Q9UMR5 302 aa13.85□□□□□ -0.19
CHD1-202ENST00000414220 DAPP1Q9UN19 280 aa13.85□□□□□ -0.19
CHD1-202ENST00000414220 PLAAQ9Y263 795 aa13.85□□□□□ -0.19
CHD1-202ENST00000414220 FER1L5A0AVI2 2057 aa13.85□□□□□ -0.19
CHD1-202ENST00000414220 SH3BGRLO75368 114 aa13.84□□□□□ -0.19
CHD1-202ENST00000414220 C1QL1O75973 258 aa13.84□□□□□ -0.19
CHD1-202ENST00000414220 SBK3P0C264 359 aa13.84□□□□□ -0.19
CHD1-202ENST00000414220 CPA3P15088 417 aa13.84□□□□□ -0.19
CHD1-202ENST00000414220 ATP5A1P25705 553 aaKnown RBP13.84□□□□□ -0.19
CHD1-202ENST00000414220 CERS1P27544 350 aa13.84□□□□□ -0.19
CHD1-202ENST00000414220 HMOX2P30519 316 aa13.84□□□□□ -0.19
CHD1-202ENST00000414220 CDH13P55290 713 aa13.84□□□□□ -0.19
CHD1-202ENST00000414220 LIM2P55344 173 aa13.84□□□□□ -0.19
CHD1-202ENST00000414220 PKNOX1P55347 436 aa13.84□□□□□ -0.19
CHD1-202ENST00000414220 TAS2R50P59544 299 aa13.84□□□□□ -0.19
CHD1-202ENST00000414220 SNRPNP63162 240 aaKnown RBP13.84□□□□□ -0.19
CHD1-202ENST00000414220 SLC18A2Q05940 514 aa13.84□□□□□ -0.19
CHD1-202ENST00000414220 SLC13A2Q13183 592 aa13.84□□□□□ -0.19
CHD1-202ENST00000414220 RUNX2Q13950 521 aa13.84□□□□□ -0.19
CHD1-202ENST00000414220 BTBD16Q32M84 506 aa13.84□□□□□ -0.19
CHD1-202ENST00000414220 SFT2D3Q587I9 215 aa13.84□□□□□ -0.19
CHD1-202ENST00000414220 CRB2Q5IJ48 1285 aa13.84□□□□□ -0.19
CHD1-202ENST00000414220 ADNP2Q6IQ32 1131 aa13.84□□□□□ -0.19
CHD1-202ENST00000414220 CYP20A1Q6UW02 462 aa13.84□□□□□ -0.19
CHD1-202ENST00000414220 ISLR2Q6UXK2 745 aa13.84□□□□□ -0.19
CHD1-202ENST00000414220 ZYG11AQ6WRX3 759 aa13.84□□□□□ -0.19
CHD1-202ENST00000414220 PAGE2Q7Z2X7 111 aa13.84□□□□□ -0.19
CHD1-202ENST00000414220 TMEM151BQ8IW70 566 aa13.84□□□□□ -0.19
CHD1-202ENST00000414220 C4orf33Q8N1A6 199 aa13.84□□□□□ -0.19
CHD1-202ENST00000414220 CCNYL1Q8N7R7 359 aa13.84□□□□□ -0.19
CHD1-202ENST00000414220 ACOT4Q8N9L9 421 aa13.84□□□□□ -0.19
CHD1-202ENST00000414220 WDR20Q8TBZ3 569 aa13.84□□□□□ -0.19
CHD1-202ENST00000414220 SELENOMQ8WWX9 145 aa13.84□□□□□ -0.19
CHD1-202ENST00000414220 MTFMTQ96DP5 389 aaKnown RBP13.84□□□□□ -0.19
CHD1-202ENST00000414220 L3HYPDHQ96EM0 354 aa13.84□□□□□ -0.19
CHD1-202ENST00000414220 NSUN5Q96P11 429 aaKnown RBP13.84□□□□□ -0.19
CHD1-202ENST00000414220 QRFPRQ96P65 431 aa13.84□□□□□ -0.19
CHD1-202ENST00000414220 LMF1Q96S06 567 aa13.84□□□□□ -0.19
CHD1-202ENST00000414220 TMEM109Q9BVC6 243 aa13.84□□□□□ -0.19
CHD1-202ENST00000414220 ZNF552Q9H707 407 aaPredicted RBP13.84□□□□□ -0.19
CHD1-202ENST00000414220 ZBTB26Q9HCK0 441 aa13.84□□□□□ -0.19
CHD1-202ENST00000414220 TRPS1Q9UHF7 1281 aa13.84□□□□□ -0.19
CHD1-202ENST00000414220 LGALS13Q9UHV8 139 aa13.84□□□□□ -0.19
CHD1-202ENST00000414220 ARHGAP10A1A4S6 786 aa13.83□□□□□ -0.2
CHD1-202ENST00000414220 SAP18O00422 153 aaKnown RBP13.83□□□□□ -0.2
CHD1-202ENST00000414220 RGS16O15492 202 aaPredicted RBP13.83□□□□□ -0.2
CHD1-202ENST00000414220 SUV39H1O43463 412 aa13.83□□□□□ -0.2
CHD1-202ENST00000414220 CRCPO75575 148 aa13.83□□□□□ -0.2
CHD1-202ENST00000414220 SEC24DO94855 1032 aaPredicted RBP13.83□□□□□ -0.2
CHD1-202ENST00000414220 PROCP04070 461 aa13.83□□□□□ -0.2
CHD1-202ENST00000414220 MYZAPP0CAP1 466 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms