RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 ARHGEF33A8MVX0 844 aa13.96□□□□□ -0.17
SEMA3F-202ENST00000413852 H3BN98 237 aa13.96□□□□□ -0.17
SEMA3F-202ENST00000413852 FFAR1O14842 300 aa13.96□□□□□ -0.17
SEMA3F-202ENST00000413852 RECKO95980 971 aa13.96□□□□□ -0.17
SEMA3F-202ENST00000413852 CYBAP13498 195 aa13.96□□□□□ -0.17
SEMA3F-202ENST00000413852 LIM2P55344 173 aa13.96□□□□□ -0.17
SEMA3F-202ENST00000413852 NDUFA5Q16718 116 aa13.96□□□□□ -0.17
SEMA3F-202ENST00000413852 BRAT1Q6PJG6 821 aa13.96□□□□□ -0.17
SEMA3F-202ENST00000413852 LRRC70Q7Z2Q7 622 aa13.96□□□□□ -0.17
SEMA3F-202ENST00000413852 OR8J2Q8NGG1 315 aa13.96□□□□□ -0.17
SEMA3F-202ENST00000413852 WDR20Q8TBZ3 569 aa13.96□□□□□ -0.17
SEMA3F-202ENST00000413852 CLIP3Q96DZ5 547 aa13.96□□□□□ -0.17
SEMA3F-202ENST00000413852 MTG2Q9H4K7 406 aa13.96□□□□□ -0.17
SEMA3F-202ENST00000413852 ANKHQ9HCJ1 492 aa13.96□□□□□ -0.17
SEMA3F-202ENST00000413852 CCDC177Q9NQR7 707 aaPredicted RBP13.96□□□□□ -0.17
SEMA3F-202ENST00000413852 ZDHHC3Q9NYG2 299 aa13.96□□□□□ -0.17
SEMA3F-202ENST00000413852 MKLN1Q9UL63 735 aa13.96□□□□□ -0.17
SEMA3F-202ENST00000413852 POFUT2Q9Y2G5 429 aa13.96□□□□□ -0.17
SEMA3F-202ENST00000413852 SNX11Q9Y5W9 270 aa13.96□□□□□ -0.17
SEMA3F-202ENST00000413852 ADAMTS4O75173 837 aa13.96□□□□□ -0.18
SEMA3F-202ENST00000413852 SEMA7AO75326 666 aa13.96□□□□□ -0.18
SEMA3F-202ENST00000413852 CHRNB1P11230 501 aa13.96□□□□□ -0.18
SEMA3F-202ENST00000413852 PTNP21246 168 aa13.96□□□□□ -0.18
SEMA3F-202ENST00000413852 PDHA2P29803 388 aa13.96□□□□□ -0.18
SEMA3F-202ENST00000413852 INSL4Q14641 139 aa13.96□□□□□ -0.18
SEMA3F-202ENST00000413852 VEPH1Q14D04 833 aa13.96□□□□□ -0.18
SEMA3F-202ENST00000413852 FLYWCH1Q4VC44 716 aa13.96□□□□□ -0.18
SEMA3F-202ENST00000413852 TNFAIP8L2Q6P589 184 aaPredicted RBP13.96□□□□□ -0.18
SEMA3F-202ENST00000413852 TMCO2Q7Z6W1 182 aaPredicted RBP13.96□□□□□ -0.18
SEMA3F-202ENST00000413852 DNAJB8Q8NHS0 232 aa13.96□□□□□ -0.18
SEMA3F-202ENST00000413852 RAB8BQ92930 207 aa13.96□□□□□ -0.18
SEMA3F-202ENST00000413852 ZIC5Q96T25 663 aa13.96□□□□□ -0.18
SEMA3F-202ENST00000413852 KLF16Q9BXK1 252 aaPredicted RBP13.96□□□□□ -0.18
SEMA3F-202ENST00000413852 FAM120CQ9NX05 1096 aaKnown RBP13.96□□□□□ -0.18
SEMA3F-202ENST00000413852 CKAP5Q14008 2032 aa13.95□□□□□ -0.18
SEMA3F-202ENST00000413852 TET1Q8NFU7 2136 aa13.95□□□□□ -0.18
SEMA3F-202ENST00000413852 PCM1Q15154 2024 aa13.95□□□□□ -0.18
SEMA3F-202ENST00000413852 A0A0G2JMP0 313 aa13.95□□□□□ -0.18
SEMA3F-202ENST00000413852 A0A0X1KG70 313 aa13.95□□□□□ -0.18
SEMA3F-202ENST00000413852 TRBC2A0A5B9 178 aa13.95□□□□□ -0.18
SEMA3F-202ENST00000413852 ZNF8P17098 575 aaPredicted RBP13.95□□□□□ -0.18
SEMA3F-202ENST00000413852 HYAL2Q12891 473 aa13.95□□□□□ -0.18
SEMA3F-202ENST00000413852 HNRNPA0Q13151 305 aaKnown RBP13.95□□□□□ -0.18
SEMA3F-202ENST00000413852 VEZF1Q14119 521 aa13.95□□□□□ -0.18
SEMA3F-202ENST00000413852 PLAG1Q6DJT9 500 aa13.95□□□□□ -0.18
SEMA3F-202ENST00000413852 TMPRSS11BQ86T26 416 aa13.95□□□□□ -0.18
SEMA3F-202ENST00000413852 ZNF740Q8NDX6 193 aa13.95□□□□□ -0.18
SEMA3F-202ENST00000413852 BRD9Q9H8M2 597 aa13.95□□□□□ -0.18
SEMA3F-202ENST00000413852 TRPM5Q9NZQ8 1165 aa13.95□□□□□ -0.18
SEMA3F-202ENST00000413852 CLCA3PQ9Y6N3 262 aa13.95□□□□□ -0.18
SEMA3F-202ENST00000413852 MAU2Q9Y6X3 613 aa13.95□□□□□ -0.18
SEMA3F-202ENST00000413852 ADAMDEC1O15204 470 aa13.95□□□□□ -0.18
SEMA3F-202ENST00000413852 NCR1O76036 304 aa13.95□□□□□ -0.18
SEMA3F-202ENST00000413852 SLC16A8O95907 504 aa13.95□□□□□ -0.18
SEMA3F-202ENST00000413852 TNNI3P19429 210 aa13.95□□□□□ -0.18
SEMA3F-202ENST00000413852 CHI3L1P36222 383 aaPredicted RBP13.95□□□□□ -0.18
SEMA3F-202ENST00000413852 ERAP2Q6P179 960 aa13.95□□□□□ -0.18
SEMA3F-202ENST00000413852 TRAF7Q6Q0C0 670 aa13.95□□□□□ -0.18
SEMA3F-202ENST00000413852 TAGAPQ8N103 731 aa13.95□□□□□ -0.18
SEMA3F-202ENST00000413852 TCEANCQ8N8B7 351 aa13.95□□□□□ -0.18
SEMA3F-202ENST00000413852 CHST14Q8NCH0 376 aa13.95□□□□□ -0.18
SEMA3F-202ENST00000413852 DBF4BQ8NFT6 615 aa13.95□□□□□ -0.18
SEMA3F-202ENST00000413852 ADAMTS19Q8TE59 1207 aa13.95□□□□□ -0.18
SEMA3F-202ENST00000413852 VOPP1Q96AW1 172 aa13.95□□□□□ -0.18
SEMA3F-202ENST00000413852 SLC6A18Q96N87 628 aa13.95□□□□□ -0.18
SEMA3F-202ENST00000413852 RAD9AQ99638 391 aa13.95□□□□□ -0.18
SEMA3F-202ENST00000413852 ABCG4Q9H172 646 aa13.95□□□□□ -0.18
SEMA3F-202ENST00000413852 SPNS1Q9H2V7 528 aa13.95□□□□□ -0.18
SEMA3F-202ENST00000413852 MIXL1Q9H2W2 232 aa13.95□□□□□ -0.18
SEMA3F-202ENST00000413852 CBLP22681 906 aa13.94□□□□□ -0.18
SEMA3F-202ENST00000413852 PCGF2P35227 344 aa13.94□□□□□ -0.18
SEMA3F-202ENST00000413852 CD79BP40259 229 aa13.94□□□□□ -0.18
SEMA3F-202ENST00000413852 CRYBB2P43320 205 aa13.94□□□□□ -0.18
SEMA3F-202ENST00000413852 LMAN2Q12907 356 aa13.94□□□□□ -0.18
SEMA3F-202ENST00000413852 PUM1Q14671 1186 aaKnown RBP eCLIP13.94□□□□□ -0.18
SEMA3F-202ENST00000413852 OR2G6Q5TZ20 316 aa13.94□□□□□ -0.18
SEMA3F-202ENST00000413852 FRMPD2BQ6IN97 320 aa13.94□□□□□ -0.18
SEMA3F-202ENST00000413852 SYCE2Q6PIF2 218 aa13.94□□□□□ -0.18
SEMA3F-202ENST00000413852 CHST9Q7L1S5 443 aa13.94□□□□□ -0.18
SEMA3F-202ENST00000413852 SIX5Q8N196 739 aa13.94□□□□□ -0.18
SEMA3F-202ENST00000413852 PGBD3Q8N328 593 aa13.94□□□□□ -0.18
SEMA3F-202ENST00000413852 OR7G3Q8NG95 312 aa13.94□□□□□ -0.18
SEMA3F-202ENST00000413852 POLR2J2Q9GZM3 115 aaKnown RBP13.94□□□□□ -0.18
SEMA3F-202ENST00000413852 IRF2BPLQ9H1B7 796 aa13.94□□□□□ -0.18
SEMA3F-202ENST00000413852 CFL2Q9Y281 166 aa13.94□□□□□ -0.18
SEMA3F-202ENST00000413852 HELZP42694 1942 aaKnown RBP13.94□□□□□ -0.18
SEMA3F-202ENST00000413852 FAM172BPA6NC97 362 aa13.94□□□□□ -0.18
SEMA3F-202ENST00000413852 OR6C70A6NIJ9 312 aa13.94□□□□□ -0.18
SEMA3F-202ENST00000413852 TBKBP1A7MCY6 615 aa13.94□□□□□ -0.18
SEMA3F-202ENST00000413852 CYP2A7P20853 494 aa13.94□□□□□ -0.18
SEMA3F-202ENST00000413852 HNF4AP41235 474 aa13.94□□□□□ -0.18
SEMA3F-202ENST00000413852 FLT3LGP49771 235 aa13.94□□□□□ -0.18
SEMA3F-202ENST00000413852 ATN1P54259 1190 aaPredicted RBP13.94□□□□□ -0.18
SEMA3F-202ENST00000413852 B3GLCTQ6Y288 498 aa13.94□□□□□ -0.18
SEMA3F-202ENST00000413852 ZNF367Q7RTV3 350 aa13.94□□□□□ -0.18
SEMA3F-202ENST00000413852 PIK3R3Q92569 461 aa13.94□□□□□ -0.18
SEMA3F-202ENST00000413852 UPF1Q92900 1129 aaKnown RBP eCLIP13.94□□□□□ -0.181e-6■■■■□ 19.9
SEMA3F-202ENST00000413852 NEIL2Q969S2 332 aa13.94□□□□□ -0.18
SEMA3F-202ENST00000413852 TM9SF2Q99805 663 aa13.94□□□□□ -0.18
SEMA3F-202ENST00000413852 PRR14Q9BWN1 585 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms