RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 TTYH2Q9BSA4 534 aa11.3□□□□□ -0.6
LIMS2-210ENST00000413578 TTTY12Q9BZ98 90 aa11.3□□□□□ -0.6
LIMS2-210ENST00000413578 PLAC1Q9HBJ0 212 aa11.3□□□□□ -0.6
LIMS2-210ENST00000413578 DLL4Q9NR61 685 aa11.3□□□□□ -0.6
LIMS2-210ENST00000413578 PNPLA3Q9NST1 481 aa11.3□□□□□ -0.6
LIMS2-210ENST00000413578 ZNF358Q9NW07 568 aa11.3□□□□□ -0.6
LIMS2-210ENST00000413578 KCMF1Q9P0J7 381 aa11.3□□□□□ -0.6
LIMS2-210ENST00000413578 FBXW2Q9UKT8 454 aa11.3□□□□□ -0.6
LIMS2-210ENST00000413578 LIPGQ9Y5X9 500 aa11.3□□□□□ -0.6
LIMS2-210ENST00000413578 MAD1L1Q9Y6D9 718 aa11.3□□□□□ -0.6
LIMS2-210ENST00000413578 ZNF407Q9C0G0 2248 aa11.29□□□□□ -0.6
LIMS2-210ENST00000413578 OR14I1A6ND48 311 aa11.29□□□□□ -0.6
LIMS2-210ENST00000413578 FAM166BA8MTA8 275 aa11.29□□□□□ -0.6
LIMS2-210ENST00000413578 A8MVJ9 347 aa11.29□□□□□ -0.6
LIMS2-210ENST00000413578 NPIPA2E9PIF3 369 aa11.29□□□□□ -0.6
LIMS2-210ENST00000413578 NPIPA3F8WFD2 350 aa11.29□□□□□ -0.6
LIMS2-210ENST00000413578 OR2J2O76002 312 aa11.29□□□□□ -0.6
LIMS2-210ENST00000413578 ZFAND5O76080 213 aa11.29□□□□□ -0.6
LIMS2-210ENST00000413578 OR6B1O95007 311 aa11.29□□□□□ -0.6
LIMS2-210ENST00000413578 NADKO95544 446 aaPredicted RBP11.29□□□□□ -0.6
LIMS2-210ENST00000413578 TBX6O95947 436 aaPredicted RBP11.29□□□□□ -0.6
LIMS2-210ENST00000413578 ENO2P09104 434 aaPredicted RBP11.29□□□□□ -0.6
LIMS2-210ENST00000413578 CCDC175P0C221 793 aa11.29□□□□□ -0.6
LIMS2-210ENST00000413578 PGAM1P18669 254 aa11.29□□□□□ -0.6
LIMS2-210ENST00000413578 ACVR2AP27037 513 aa11.29□□□□□ -0.6
LIMS2-210ENST00000413578 CDC25BP30305 580 aa11.29□□□□□ -0.6
LIMS2-210ENST00000413578 CXCR5P32302 372 aa11.29□□□□□ -0.6
LIMS2-210ENST00000413578 HSD17B7P56937 341 aa11.29□□□□□ -0.6
LIMS2-210ENST00000413578 IL2P60568 153 aa11.29□□□□□ -0.6
LIMS2-210ENST00000413578 FOLH1Q04609 750 aa11.29□□□□□ -0.6
LIMS2-210ENST00000413578 FOXO1Q12778 655 aa11.29□□□□□ -0.6
LIMS2-210ENST00000413578 RUNX2Q13950 521 aa11.29□□□□□ -0.6
LIMS2-210ENST00000413578 HYAL4Q2M3T9 481 aa11.29□□□□□ -0.6
LIMS2-210ENST00000413578 PAOXQ6QHF9 649 aa11.29□□□□□ -0.6
LIMS2-210ENST00000413578 NXPE4Q6UWF7 544 aa11.29□□□□□ -0.6
LIMS2-210ENST00000413578 LIX1LQ8IVB5 337 aa11.29□□□□□ -0.6
LIMS2-210ENST00000413578 CLYBLQ8N0X4 340 aa11.29□□□□□ -0.6
LIMS2-210ENST00000413578 RASGEF1CQ8N431 466 aa11.29□□□□□ -0.6
LIMS2-210ENST00000413578 OR5M3Q8NGP4 307 aa11.29□□□□□ -0.6
LIMS2-210ENST00000413578 PDLIM5Q96HC4 596 aaKnown RBP11.29□□□□□ -0.6
LIMS2-210ENST00000413578 TSNARE1Q96NA8 513 aa11.29□□□□□ -0.6
LIMS2-210ENST00000413578 RASL10BQ96S79 203 aa11.29□□□□□ -0.6
LIMS2-210ENST00000413578 SMC6Q96SB8 1091 aa11.29□□□□□ -0.6
LIMS2-210ENST00000413578 RHBGQ9H310 441 aa11.29□□□□□ -0.6
LIMS2-210ENST00000413578 HPF1Q9NWY4 346 aa11.29□□□□□ -0.6
LIMS2-210ENST00000413578 MYOTQ9UBF9 498 aa11.29□□□□□ -0.6
LIMS2-210ENST00000413578 DNAJC13O75165 2243 aa11.29□□□□□ -0.6
LIMS2-210ENST00000413578 MAP1AP78559 2803 aaPredicted RBP11.28□□□□□ -0.6
LIMS2-210ENST00000413578 A0A0G2JNJ9 132 aa11.28□□□□□ -0.6
LIMS2-210ENST00000413578 BCKDKO14874 412 aa11.28□□□□□ -0.6
LIMS2-210ENST00000413578 ZWINTO95229 277 aa11.28□□□□□ -0.6
LIMS2-210ENST00000413578 GLI4P10075 376 aa11.28□□□□□ -0.6
LIMS2-210ENST00000413578 ADH7P40394 386 aa11.28□□□□□ -0.6
LIMS2-210ENST00000413578 SOX3P41225 446 aa11.28□□□□□ -0.6
LIMS2-210ENST00000413578 RAB38P57729 211 aa11.28□□□□□ -0.6
LIMS2-210ENST00000413578 CYP1B1Q16678 543 aa11.28□□□□□ -0.6
LIMS2-210ENST00000413578 ADPRMQ3LIE5 342 aa11.28□□□□□ -0.6
LIMS2-210ENST00000413578 RNASEH2BQ5TBB1 312 aaKnown RBP11.28□□□□□ -0.6
LIMS2-210ENST00000413578 NDUFAF5Q5TEU4 345 aa11.28□□□□□ -0.6
LIMS2-210ENST00000413578 B3GNT6Q6ZMB0 384 aa11.28□□□□□ -0.6
LIMS2-210ENST00000413578 TRILQ7L0X0 811 aa11.28□□□□□ -0.6
LIMS2-210ENST00000413578 TMPRSS11BQ86T26 416 aa11.28□□□□□ -0.6
LIMS2-210ENST00000413578 SLC22A16Q86VW1 577 aa11.28□□□□□ -0.6
LIMS2-210ENST00000413578 THOC6Q86W42 341 aaKnown RBP11.28□□□□□ -0.6
LIMS2-210ENST00000413578 TMEM251Q8N6I4 163 aa11.28□□□□□ -0.6
LIMS2-210ENST00000413578 OR5M9Q8NGP3 310 aa11.28□□□□□ -0.6
LIMS2-210ENST00000413578 GAL3ST3Q96A11 431 aa11.28□□□□□ -0.6
LIMS2-210ENST00000413578 MS4A6EQ96DS6 147 aa11.28□□□□□ -0.6
LIMS2-210ENST00000413578 QRFPRQ96P65 431 aa11.28□□□□□ -0.6
LIMS2-210ENST00000413578 AIF1LQ9BQI0 150 aa11.28□□□□□ -0.6
LIMS2-210ENST00000413578 NPLQ9BXD5 320 aaPredicted RBP11.28□□□□□ -0.6
LIMS2-210ENST00000413578 TRIM54Q9BYV2 358 aa11.28□□□□□ -0.6
LIMS2-210ENST00000413578 ADAP2Q9NPF8 381 aa11.28□□□□□ -0.6
LIMS2-210ENST00000413578 PRTFDC1Q9NRG1 225 aa11.28□□□□□ -0.6
LIMS2-210ENST00000413578 PNO1Q9NRX1 252 aaKnown RBP11.28□□□□□ -0.6
LIMS2-210ENST00000413578 CCM2LQ9NUG4 571 aaPredicted RBP11.28□□□□□ -0.6
LIMS2-210ENST00000413578 SLC17A6Q9P2U8 582 aa11.28□□□□□ -0.6
LIMS2-210ENST00000413578 Q9UFV3 132 aa11.28□□□□□ -0.6
LIMS2-210ENST00000413578 SYNDIG1LA6NDD5 238 aa11.27□□□□□ -0.61
LIMS2-210ENST00000413578 FIGNL2A6NMB9 653 aa11.27□□□□□ -0.61
LIMS2-210ENST00000413578 ACOT7O00154 380 aa11.27□□□□□ -0.61
LIMS2-210ENST00000413578 CYR61O00622 381 aa11.27□□□□□ -0.61
LIMS2-210ENST00000413578 AQP7O14520 342 aa11.27□□□□□ -0.61
LIMS2-210ENST00000413578 ZNF354AO60765 605 aaPredicted RBP11.27□□□□□ -0.61
LIMS2-210ENST00000413578 TTC4O95801 387 aa11.27□□□□□ -0.61
LIMS2-210ENST00000413578 GUCA1CO95843 209 aa11.27□□□□□ -0.61
LIMS2-210ENST00000413578 KLK2P20151 261 aa11.27□□□□□ -0.61
LIMS2-210ENST00000413578 HNRNPH1P31943 449 aaKnown RBP11.27□□□□□ -0.61
LIMS2-210ENST00000413578 ZFP36L2P47974 494 aaKnown RBP11.27□□□□□ -0.61
LIMS2-210ENST00000413578 STXBP1P61764 594 aaKnown RBP11.27□□□□□ -0.61
LIMS2-210ENST00000413578 BTN3A2P78410 334 aa11.27□□□□□ -0.61
LIMS2-210ENST00000413578 MYBPHQ13203 477 aa11.27□□□□□ -0.61
LIMS2-210ENST00000413578 ELAVL1Q15717 326 aaKnown RBP11.27□□□□□ -0.61
LIMS2-210ENST00000413578 TOR1AIP1Q5JTV8 583 aa11.27□□□□□ -0.61
LIMS2-210ENST00000413578 HECTD2Q5U5R9 776 aa11.27□□□□□ -0.61
LIMS2-210ENST00000413578 IL20RBQ6UXL0 311 aa11.27□□□□□ -0.61
LIMS2-210ENST00000413578 GAS2L3Q86XJ1 694 aa11.27□□□□□ -0.61
LIMS2-210ENST00000413578 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.27□□□□□ -0.61
LIMS2-210ENST00000413578 ZNF595Q8IYB9 648 aa11.27□□□□□ -0.61
LIMS2-210ENST00000413578 KLHDC8AQ8IYD2 350 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms