RNA–Protein interactions for RNA: ENST00000412570.5

SMPD4-203, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,601 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-203ENST00000412570 NRF1Q16656 503 aa9.24□□□□□ -0.93
SMPD4-203ENST00000412570 PMS2CLQ68D20 193 aa9.24□□□□□ -0.93
SMPD4-203ENST00000412570 FCRL6Q6DN72 434 aa9.24□□□□□ -0.93
SMPD4-203ENST00000412570 TMPRSS9Q7Z410 1059 aa9.24□□□□□ -0.93
SMPD4-203ENST00000412570 MINDY1Q8N5J2 469 aa9.24□□□□□ -0.93
SMPD4-203ENST00000412570 XAGE5Q8WWM1 108 aa9.24□□□□□ -0.93
SMPD4-203ENST00000412570 FAM162AQ96A26 154 aa9.24□□□□□ -0.93
SMPD4-203ENST00000412570 RNF145Q96MT1 663 aa9.24□□□□□ -0.93
SMPD4-203ENST00000412570 CGREF1Q99674 301 aa9.24□□□□□ -0.93
SMPD4-203ENST00000412570 TUBB6Q9BUF5 446 aa9.24□□□□□ -0.93
SMPD4-203ENST00000412570 ALG2Q9H553 416 aa9.24□□□□□ -0.93
SMPD4-203ENST00000412570 LIN28AQ9H9Z2 209 aaKnown RBP9.24□□□□□ -0.93
SMPD4-203ENST00000412570 GID8Q9NWU2 228 aa9.24□□□□□ -0.93
SMPD4-203ENST00000412570 SLC25A37Q9NYZ2 338 aa9.24□□□□□ -0.93
SMPD4-203ENST00000412570 RAB23Q9ULC3 237 aa9.24□□□□□ -0.93
SMPD4-203ENST00000412570 DNMT3AQ9Y6K1 912 aaPredicted RBP9.24□□□□□ -0.93
SMPD4-203ENST00000412570 LRIT2A6NDA9 550 aa9.24□□□□□ -0.93
SMPD4-203ENST00000412570 CFAP73A6NFT4 308 aa9.24□□□□□ -0.93
SMPD4-203ENST00000412570 FKBP9O95302 570 aa9.24□□□□□ -0.93
SMPD4-203ENST00000412570 CPN2P22792 545 aa9.24□□□□□ -0.93
SMPD4-203ENST00000412570 CXCR2P25025 360 aa9.24□□□□□ -0.93
SMPD4-203ENST00000412570 RPS9P46781 194 aaKnown RBP9.24□□□□□ -0.93
SMPD4-203ENST00000412570 NCBP2P52298 156 aaKnown RBP eCLIP9.24□□□□□ -0.93
SMPD4-203ENST00000412570 HNRNPFP52597 415 aaKnown RBP9.24□□□□□ -0.93
SMPD4-203ENST00000412570 GAB1Q13480 694 aa9.24□□□□□ -0.93
SMPD4-203ENST00000412570 RCAN2Q14206 197 aa9.24□□□□□ -0.93
SMPD4-203ENST00000412570 COX20Q5RI15 118 aa9.24□□□□□ -0.93
SMPD4-203ENST00000412570 TMEM107Q6UX40 140 aa9.24□□□□□ -0.93
SMPD4-203ENST00000412570 FKBP9P1Q75LS8 142 aa9.24□□□□□ -0.93
SMPD4-203ENST00000412570 THAP3Q8WTV1 239 aaPredicted RBP9.24□□□□□ -0.93
SMPD4-203ENST00000412570 RGMAQ96B86 450 aa9.24□□□□□ -0.93
SMPD4-203ENST00000412570 MS4A8Q9BY19 250 aa9.24□□□□□ -0.93
SMPD4-203ENST00000412570 ZNF385DQ9H6B1 395 aa9.24□□□□□ -0.93
SMPD4-203ENST00000412570 FXYD1O00168 92 aa9.23□□□□□ -0.93
SMPD4-203ENST00000412570 IFNA16P05015 189 aa9.23□□□□□ -0.93
SMPD4-203ENST00000412570 FAM58BPP0C7Q3 252 aa9.23□□□□□ -0.93
SMPD4-203ENST00000412570 DDX5P17844 614 aaKnown RBP9.23□□□□□ -0.93
SMPD4-203ENST00000412570 ATP6V1B2P21281 511 aa9.23□□□□□ -0.93
SMPD4-203ENST00000412570 IST1P53990 364 aa9.23□□□□□ -0.93
SMPD4-203ENST00000412570 DMPKQ09013 629 aa9.23□□□□□ -0.93
SMPD4-203ENST00000412570 SLC13A2Q13183 592 aa9.23□□□□□ -0.93
SMPD4-203ENST00000412570 RPS26P11Q5JNZ5 115 aaPredicted RBP9.23□□□□□ -0.93
SMPD4-203ENST00000412570 OR4C11Q6IEV9 310 aa9.23□□□□□ -0.93
SMPD4-203ENST00000412570 UBE3DQ7Z6J8 389 aa9.23□□□□□ -0.93
SMPD4-203ENST00000412570 NUDT13Q86X67 352 aa9.23□□□□□ -0.93
SMPD4-203ENST00000412570 RNF130Q86XS8 419 aa9.23□□□□□ -0.93
SMPD4-203ENST00000412570 CADM4Q8NFZ8 388 aa9.23□□□□□ -0.93
SMPD4-203ENST00000412570 GAB3Q8WWW8 586 aa9.23□□□□□ -0.93
SMPD4-203ENST00000412570 SERPINI1Q99574 410 aa9.23□□□□□ -0.93
SMPD4-203ENST00000412570 ZFYVE21Q9BQ24 234 aa9.23□□□□□ -0.93
SMPD4-203ENST00000412570 ADAP2Q9NPF8 381 aa9.23□□□□□ -0.93
SMPD4-203ENST00000412570 SNX7Q9UNH6 387 aa9.23□□□□□ -0.93
SMPD4-203ENST00000412570 CCDC88CQ9P219 2028 aa9.23□□□□□ -0.93
SMPD4-203ENST00000412570 A0A1W2PRB8 838 aa9.23□□□□□ -0.93
SMPD4-203ENST00000412570 GPR89AB7ZAQ6 455 aa9.23□□□□□ -0.93
SMPD4-203ENST00000412570 LMO7DNF2Z398 122 aa9.23□□□□□ -0.93
SMPD4-203ENST00000412570 B4GAT1O43505 415 aa9.23□□□□□ -0.93
SMPD4-203ENST00000412570 TPST2O60704 377 aa9.23□□□□□ -0.93
SMPD4-203ENST00000412570 GMNNO75496 209 aa9.23□□□□□ -0.93
SMPD4-203ENST00000412570 GPR89BP0CG08 455 aa9.23□□□□□ -0.93
SMPD4-203ENST00000412570 JAK1P23458 1154 aa9.23□□□□□ -0.93
SMPD4-203ENST00000412570 HPCAL1P37235 193 aa9.23□□□□□ -0.93
SMPD4-203ENST00000412570 MPLP40238 635 aa9.23□□□□□ -0.93
SMPD4-203ENST00000412570 PRIM2P49643 509 aa9.23□□□□□ -0.93
SMPD4-203ENST00000412570 RGS1Q08116 209 aa9.23□□□□□ -0.93
SMPD4-203ENST00000412570 ILF2Q12905 390 aaKnown RBP9.23□□□□□ -0.93
SMPD4-203ENST00000412570 MAD2L1Q13257 205 aaPredicted RBP9.23□□□□□ -0.93
SMPD4-203ENST00000412570 C14orf28Q4W4Y0 310 aa9.23□□□□□ -0.93
SMPD4-203ENST00000412570 SWT1Q5T5J6 900 aaKnown RBP9.23□□□□□ -0.93
SMPD4-203ENST00000412570 PGAM4Q8N0Y7 254 aa9.23□□□□□ -0.93
SMPD4-203ENST00000412570 FAM86B1Q8N7N1 296 aa9.23□□□□□ -0.93
SMPD4-203ENST00000412570 CANT1Q8WVQ1 401 aa9.23□□□□□ -0.93
SMPD4-203ENST00000412570 SLC9A6Q92581 669 aa9.23□□□□□ -0.93
SMPD4-203ENST00000412570 GTF2H4Q92759 462 aa9.23□□□□□ -0.93
SMPD4-203ENST00000412570 MS4A6EQ96DS6 147 aa9.23□□□□□ -0.93
SMPD4-203ENST00000412570 QRSL1Q9H0R6 528 aaKnown RBP9.23□□□□□ -0.93
SMPD4-203ENST00000412570 APMAPQ9HDC9 416 aa9.23□□□□□ -0.93
SMPD4-203ENST00000412570 SLAMF7Q9NQ25 335 aa9.23□□□□□ -0.93
SMPD4-203ENST00000412570 PCDHGA4Q9Y5G9 962 aa9.23□□□□□ -0.93
SMPD4-203ENST00000412570 DCHS1Q96JQ0 3298 aa9.23□□□□□ -0.93
SMPD4-203ENST00000412570 A0A1W2PR48 441 aa9.23□□□□□ -0.93
SMPD4-203ENST00000412570 VILLO15195 856 aa9.23□□□□□ -0.93
SMPD4-203ENST00000412570 KDM1AO60341 852 aa9.23□□□□□ -0.93
SMPD4-203ENST00000412570 SP9P0CG40 484 aa9.23□□□□□ -0.93
SMPD4-203ENST00000412570 CCND1P24385 295 aa9.23□□□□□ -0.93
SMPD4-203ENST00000412570 MAPK1P28482 360 aa9.23□□□□□ -0.93
SMPD4-203ENST00000412570 ZFP36L2P47974 494 aaKnown RBP9.23□□□□□ -0.93
SMPD4-203ENST00000412570 CDK9P50750 372 aaKnown RBP9.23□□□□□ -0.93
SMPD4-203ENST00000412570 DUSP2Q05923 314 aa9.23□□□□□ -0.93
SMPD4-203ENST00000412570 CCNIQ14094 377 aa9.23□□□□□ -0.93
SMPD4-203ENST00000412570 TRMT5Q32P41 509 aaKnown RBP9.23□□□□□ -0.93
SMPD4-203ENST00000412570 OTUD3Q5T2D3 398 aaPredicted RBP9.23□□□□□ -0.93
SMPD4-203ENST00000412570 MLIPQ5VWP3 458 aa9.23□□□□□ -0.93
SMPD4-203ENST00000412570 B3GNT8Q7Z7M8 397 aa9.23□□□□□ -0.93
SMPD4-203ENST00000412570 MCATQ8IVS2 390 aaKnown RBP9.23□□□□□ -0.93
SMPD4-203ENST00000412570 KIRREL3Q8IZU9 778 aa9.23□□□□□ -0.93
SMPD4-203ENST00000412570 TBC1D19Q8N5T2 526 aa9.23□□□□□ -0.93
SMPD4-203ENST00000412570 C1orf216Q8TAB5 229 aa9.23□□□□□ -0.93
SMPD4-203ENST00000412570 FAM131CQ96AQ9 280 aa9.23□□□□□ -0.93
SMPD4-203ENST00000412570 C19orf43Q9BQ61 176 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms