RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 KLF10Q13118 480 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 NR0B2Q15466 257 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 IQCCQ4KMZ1 466 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 ESCO2Q56NI9 601 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 CDHR3Q6ZTQ4 885 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 HOMEZQ8IX15 550 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 OR5J2Q8NH18 312 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 RRP8O43159 456 aaKnown RBP8.11□□□□□ -1.11
SCN9A-203ENST00000409672 MMP8P22894 467 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 PTAFRP25105 342 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 GRIA1P42261 906 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 CDKN2BP42772 138 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 MFSD13AQ14CX5 517 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 SLC35G1Q2M3R5 365 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 PGM2L1Q6PCE3 622 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 GALNT6Q8NCL4 622 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 BBS10Q8TAM1 723 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 METTL2AQ96IZ6 378 aaKnown RBP8.11□□□□□ -1.11
SCN9A-203ENST00000409672 ADAMTS10Q9H324 1103 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 KCNK12Q9HB15 430 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 TNFRSF10DQ9UBN6 386 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 MYADML2A6NDP7 307 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 GLDCP23378 1020 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 PTGER1P34995 402 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 CD83Q01151 205 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 GRK1Q15835 563 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 RUNDC3AQ59EK9 446 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 TRMT10BQ6PF06 316 aaKnown RBP8.11□□□□□ -1.11
SCN9A-203ENST00000409672 PRICKLE2Q7Z3G6 844 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 PHTF2Q8N3S3 785 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 LRRC18Q8N456 261 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 IL17RCQ8NAC3 791 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 FAM163AQ96GL9 167 aaPredicted RBP8.11□□□□□ -1.11
SCN9A-203ENST00000409672 HEBP1Q9NRV9 189 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 TRIM64CA6NLI5 447 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 ANKRD66B4E2M5 251 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 TP53I11O14683 189 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 ADAMDEC1O15204 470 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 ZNF28P17035 718 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 HOXA10P31260 410 aaPredicted RBP8.11□□□□□ -1.11
SCN9A-203ENST00000409672 IDH3AP50213 366 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 LMAN2Q12907 356 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 SLC36A4Q6YBV0 504 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 OR10G2Q8NGC3 310 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 OR4K14Q8NGD5 310 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 SUSD3Q96L08 255 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 UBXN10Q96LJ8 280 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 PIGVQ9NUD9 493 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 TRAV6A0A075B6T7 132 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 CDC14CA4D256 554 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 DCNP07585 359 aaKnown RBP8.11□□□□□ -1.11
SCN9A-203ENST00000409672 ITIH1P19827 911 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 PVALBP20472 110 aaPredicted RBP8.11□□□□□ -1.11
SCN9A-203ENST00000409672 ASPAP45381 313 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 RALGPS1Q5JS13 557 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 GJD3Q8N144 294 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 ACMSDQ8TDX5 336 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 ART4Q93070 314 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 CTRCQ99895 268 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 OSBPL11Q9BXB4 747 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 ZNF442Q9H7R0 627 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 GALPQ9UBC7 116 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 KCNN3Q9UGI6 736 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 MYH4Q9Y623 1939 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 A0A1W2PPW3 197 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 TLX2O43763 284 aaPredicted RBP8.11□□□□□ -1.11
SCN9A-203ENST00000409672 ONECUT3O60422 494 aaPredicted RBP8.11□□□□□ -1.11
SCN9A-203ENST00000409672 CCNKO75909 580 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 MT-ND5P03915 603 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 ZNF12P17014 697 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 DPP4P27487 766 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 FXYD4P59646 89 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 EEF1A1P68104 462 aaKnown RBP8.11□□□□□ -1.11
SCN9A-203ENST00000409672 ZER1Q7Z7L7 766 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 MARCH9Q86YJ5 346 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 ZNF610Q8N9Z0 462 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 SYT14Q8NB59 555 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 NODALQ96S42 347 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 HSD17B14Q9BPX1 270 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 ANKRD10Q9NXR5 420 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 WDR45Q9Y484 360 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 RBM47A0AV96 593 aaKnown RBP8.11□□□□□ -1.11
SCN9A-203ENST00000409672 ABCB7O75027 752 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 EPCAMP16422 314 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 FNTBP49356 437 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 RAB4BP61018 213 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 ELF3P78545 371 aaPredicted RBP8.11□□□□□ -1.11
SCN9A-203ENST00000409672 LYSMD4Q5XG99 296 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 SYCE2Q6PIF2 218 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 HAGHLQ6PII5 290 aaPredicted RBP8.11□□□□□ -1.11
SCN9A-203ENST00000409672 CBR4Q8N4T8 237 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 OR2M4Q96R27 311 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 APOBEC3GQ9HC16 384 aaKnown RBP8.11□□□□□ -1.11
SCN9A-203ENST00000409672 TNFRSF19Q9NS68 423 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 EFCAB7A8K855 629 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 SLC1A7O00341 560 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 MAP2K7O14733 419 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 IRAK2O43187 625 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 IQCF3P0C7M6 154 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 FOLR3P41439 243 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms