RNA–Protein interactions for RNA: ENST00000409368.5

SUMO1-206, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 4 BASIC

Gene SUMO1, Length 1,187 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-206ENST00000409368 TRIM40Q6P9F5 258 aa12.14□□□□□ -0.47
SUMO1-206ENST00000409368 PAPD4Q6PIY7 484 aaKnown RBP12.14□□□□□ -0.47
SUMO1-206ENST00000409368 UBE3DQ7Z6J8 389 aa12.14□□□□□ -0.47
SUMO1-206ENST00000409368 NFAM1Q8NET5 270 aaPredicted RBP12.14□□□□□ -0.47
SUMO1-206ENST00000409368 DNAJB14Q8TBM8 379 aa12.14□□□□□ -0.47
SUMO1-206ENST00000409368 ELP5Q8TE02 316 aa12.14□□□□□ -0.47
SUMO1-206ENST00000409368 TSLPQ969D9 159 aa12.14□□□□□ -0.47
SUMO1-206ENST00000409368 MTBPQ96DY7 904 aa12.14□□□□□ -0.47
SUMO1-206ENST00000409368 KCNC2Q96PR1 638 aa12.14□□□□□ -0.47
SUMO1-206ENST00000409368 SERINC2Q96SA4 455 aa12.14□□□□□ -0.47
SUMO1-206ENST00000409368 LPAR4Q99677 370 aa12.14□□□□□ -0.47
SUMO1-206ENST00000409368 TBCDQ9BTW9 1192 aa12.14□□□□□ -0.47
SUMO1-206ENST00000409368 C1QTNF3Q9BXJ4 246 aa12.14□□□□□ -0.47
SUMO1-206ENST00000409368 ROGDIQ9GZN7 287 aa12.14□□□□□ -0.47
SUMO1-206ENST00000409368 ILKAPQ9H0C8 392 aaPredicted RBP12.14□□□□□ -0.47
SUMO1-206ENST00000409368 LYRM4Q9HD34 91 aa12.14□□□□□ -0.47
SUMO1-206ENST00000409368 KCMF1Q9P0J7 381 aa12.14□□□□□ -0.47
SUMO1-206ENST00000409368 DAPP1Q9UN19 280 aa12.14□□□□□ -0.47
SUMO1-206ENST00000409368 IKBKGQ9Y6K9 419 aa12.14□□□□□ -0.47
SUMO1-206ENST00000409368 BLACEA4D250 179 aa12.13□□□□□ -0.47
SUMO1-206ENST00000409368 B3GALT2O43825 422 aa12.13□□□□□ -0.47
SUMO1-206ENST00000409368 VPS4BO75351 444 aa12.13□□□□□ -0.47
SUMO1-206ENST00000409368 SEC24DO94855 1032 aaPredicted RBP12.13□□□□□ -0.47
SUMO1-206ENST00000409368 SNRPAP09012 282 aaKnown RBP12.13□□□□□ -0.47
SUMO1-206ENST00000409368 SBK3P0C264 359 aa12.13□□□□□ -0.47
SUMO1-206ENST00000409368 GLRBP48167 497 aa12.13□□□□□ -0.47
SUMO1-206ENST00000409368 SLC26A5P58743 744 aa12.13□□□□□ -0.47
SUMO1-206ENST00000409368 OLR1P78380 273 aa12.13□□□□□ -0.47
SUMO1-206ENST00000409368 BTN3A2P78410 334 aa12.13□□□□□ -0.47
SUMO1-206ENST00000409368 BTG2P78543 158 aa12.13□□□□□ -0.47
SUMO1-206ENST00000409368 TGM3Q08188 693 aa12.13□□□□□ -0.47
SUMO1-206ENST00000409368 PFKFB4Q16877 469 aa12.13□□□□□ -0.47
SUMO1-206ENST00000409368 PRR30Q53SZ7 412 aaPredicted RBP12.13□□□□□ -0.47
SUMO1-206ENST00000409368 C10orf62Q5T681 223 aaPredicted RBP12.13□□□□□ -0.47
SUMO1-206ENST00000409368 DEPDC1Q5TB30 811 aa12.13□□□□□ -0.47
SUMO1-206ENST00000409368 MFSD4BQ5TF39 518 aa12.13□□□□□ -0.47
SUMO1-206ENST00000409368 ZNF595Q8IYB9 648 aa12.13□□□□□ -0.47
SUMO1-206ENST00000409368 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.13□□□□□ -0.47
SUMO1-206ENST00000409368 EXT2Q93063 718 aa12.13□□□□□ -0.47
SUMO1-206ENST00000409368 MRRFQ96E11 262 aaKnown RBP12.13□□□□□ -0.47
SUMO1-206ENST00000409368 CMTM7Q96FZ5 175 aa12.13□□□□□ -0.47
SUMO1-206ENST00000409368 FAR2Q96K12 515 aa12.13□□□□□ -0.47
SUMO1-206ENST00000409368 PTCHD1Q96NR3 888 aa12.13□□□□□ -0.47
SUMO1-206ENST00000409368 MRPL57Q9BQC6 102 aaKnown RBP12.13□□□□□ -0.47
SUMO1-206ENST00000409368 NTMT1Q9BV86 223 aa12.13□□□□□ -0.47
SUMO1-206ENST00000409368 SLC29A3Q9BZD2 475 aa12.13□□□□□ -0.47
SUMO1-206ENST00000409368 ZNF358Q9NW07 568 aa12.13□□□□□ -0.47
SUMO1-206ENST00000409368 PTGFRNQ9P2B2 879 aa12.13□□□□□ -0.47
SUMO1-206ENST00000409368 TEKT2Q9UIF3 430 aa12.13□□□□□ -0.47
SUMO1-206ENST00000409368 VPS4AQ9UN37 437 aa12.13□□□□□ -0.47
SUMO1-206ENST00000409368 NTNG1Q9Y2I2 539 aa12.13□□□□□ -0.47
SUMO1-206ENST00000409368 TRAV17A0A0B4J275 112 aa12.12□□□□□ -0.47
SUMO1-206ENST00000409368 IGHV3-20A0A0C4DH32 117 aa12.12□□□□□ -0.47
SUMO1-206ENST00000409368 EXOC1LA0A1B0GW35 172 aa12.12□□□□□ -0.47
SUMO1-206ENST00000409368 DYTNA2CJ06 578 aa12.12□□□□□ -0.47
SUMO1-206ENST00000409368 SAGE2PA6NJ88 616 aa12.12□□□□□ -0.47
SUMO1-206ENST00000409368 TCP11X1B4DZS4 312 aa12.12□□□□□ -0.47
SUMO1-206ENST00000409368 TRIM49D1C9J1S8 452 aa12.12□□□□□ -0.47
SUMO1-206ENST00000409368 PSMD12O00232 456 aaPredicted RBP12.12□□□□□ -0.47
SUMO1-206ENST00000409368 B4GALT2O60909 372 aa12.12□□□□□ -0.47
SUMO1-206ENST00000409368 CDC123O75794 336 aaPredicted RBP12.12□□□□□ -0.47
SUMO1-206ENST00000409368 CBX6O95503 412 aa12.12□□□□□ -0.47
SUMO1-206ENST00000409368 FAM153BP0C7A2 387 aa12.12□□□□□ -0.47
SUMO1-206ENST00000409368 GFAPP14136 432 aa12.12□□□□□ -0.47
SUMO1-206ENST00000409368 GPR143P51810 404 aa12.12□□□□□ -0.47
SUMO1-206ENST00000409368 LIM2P55344 173 aa12.12□□□□□ -0.47
SUMO1-206ENST00000409368 OR4D2P58180 307 aa12.12□□□□□ -0.47
SUMO1-206ENST00000409368 GTF2H2Q13888 395 aa12.12□□□□□ -0.47
SUMO1-206ENST00000409368 RCN2Q14257 317 aa12.12□□□□□ -0.47
SUMO1-206ENST00000409368 RASA2Q15283 850 aa12.12□□□□□ -0.47
SUMO1-206ENST00000409368 BTBD16Q32M84 506 aa12.12□□□□□ -0.47
SUMO1-206ENST00000409368 FAM153CQ494X1 144 aa12.12□□□□□ -0.47
SUMO1-206ENST00000409368 LGSNQ5TDP6 509 aa12.12□□□□□ -0.47
SUMO1-206ENST00000409368 ZNF324BQ6AW86 544 aaPredicted RBP12.12□□□□□ -0.47
SUMO1-206ENST00000409368 GTF2H2CQ6P1K8 395 aa12.12□□□□□ -0.47
SUMO1-206ENST00000409368 ZNF793Q6ZN11 406 aa12.12□□□□□ -0.47
SUMO1-206ENST00000409368 LINC00696Q6ZRV3 163 aa12.12□□□□□ -0.47
SUMO1-206ENST00000409368 CHSY3Q70JA7 882 aa12.12□□□□□ -0.47
SUMO1-206ENST00000409368 SIRT6Q8N6T7 355 aa12.12□□□□□ -0.47
SUMO1-206ENST00000409368 TEX9Q8N6V9 391 aa12.12□□□□□ -0.47
SUMO1-206ENST00000409368 C7orf57Q8NEG2 295 aa12.12□□□□□ -0.47
SUMO1-206ENST00000409368 MZB1Q8WU39 189 aa12.12□□□□□ -0.47
SUMO1-206ENST00000409368 C19orf60Q96EN9 201 aa12.12□□□□□ -0.47
SUMO1-206ENST00000409368 ZNF354BQ96LW1 612 aa12.12□□□□□ -0.47
SUMO1-206ENST00000409368 F2RL3Q96RI0 385 aa12.12□□□□□ -0.47
SUMO1-206ENST00000409368 NPAS2Q99743 824 aa12.12□□□□□ -0.47
SUMO1-206ENST00000409368 RBCK1Q9BYM8 510 aa12.12□□□□□ -0.47
SUMO1-206ENST00000409368 VPS11Q9H270 941 aa12.12□□□□□ -0.47
SUMO1-206ENST00000409368 MRPL46Q9H2W6 279 aaKnown RBP12.12□□□□□ -0.47
SUMO1-206ENST00000409368 TRIM45Q9H8W5 580 aaPredicted RBP12.12□□□□□ -0.47
SUMO1-206ENST00000409368 NECTIN3Q9NQS3 549 aa12.12□□□□□ -0.47
SUMO1-206ENST00000409368 ASF1BQ9NVP2 202 aa12.12□□□□□ -0.47
SUMO1-206ENST00000409368 PCDHGA11Q9Y5H2 935 aa12.12□□□□□ -0.47
SUMO1-206ENST00000409368 COPG1Q9Y678 874 aaKnown RBP12.12□□□□□ -0.47
SUMO1-206ENST00000409368 UTP20O75691 2785 aaKnown RBP12.12□□□□□ -0.47
SUMO1-206ENST00000409368 ICE1Q9Y2F5 2266 aa12.11□□□□□ -0.47
SUMO1-206ENST00000409368 OR5H15A6NDH6 313 aa12.11□□□□□ -0.47
SUMO1-206ENST00000409368 LRRC14BA6NHZ5 514 aa12.11□□□□□ -0.47
SUMO1-206ENST00000409368 FAM227AF5H4B4 570 aa12.11□□□□□ -0.47
SUMO1-206ENST00000409368 POC1B-GALNT4F8VUJ3 575 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms