RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 ABT1Q9ULW3 272 aaKnown RBP17.03■□□□□ 0.32
SMPD4-202ENST00000409031 CEBPGP53567 150 aa17.03■□□□□ 0.32
SMPD4-202ENST00000409031 E2F1Q01094 437 aa17.03■□□□□ 0.32
SMPD4-202ENST00000409031 SLBPQ14493 270 aaKnown RBP eCLIP17.03■□□□□ 0.32
SMPD4-202ENST00000409031 POU4F3Q15319 338 aa17.03■□□□□ 0.32
SMPD4-202ENST00000409031 TARBP2Q15633 366 aaKnown RBP17.03■□□□□ 0.32
SMPD4-202ENST00000409031 SLC22A17Q8WUG5 538 aa17.03■□□□□ 0.32
SMPD4-202ENST00000409031 SLC2A13Q96QE2 648 aa17.03■□□□□ 0.32
SMPD4-202ENST00000409031 ZNF436Q9C0F3 470 aaPredicted RBP17.03■□□□□ 0.32
SMPD4-202ENST00000409031 ACSL5Q9ULC5 683 aa17.03■□□□□ 0.32
SMPD4-202ENST00000409031 A0A075B6Q4 140 aa17.03■□□□□ 0.32
SMPD4-202ENST00000409031 PDGFAP04085 211 aa17.03■□□□□ 0.32
SMPD4-202ENST00000409031 JUNP05412 331 aaKnown RBP17.03■□□□□ 0.32
SMPD4-202ENST00000409031 TRAPPC2P0DI81 140 aa17.03■□□□□ 0.32
SMPD4-202ENST00000409031 TRAPPC2BP0DI82 140 aa17.03■□□□□ 0.32
SMPD4-202ENST00000409031 CREMQ03060 361 aa17.03■□□□□ 0.32
SMPD4-202ENST00000409031 DUSP4Q13115 394 aa17.03■□□□□ 0.32
SMPD4-202ENST00000409031 PTPRCAPQ14761 206 aa17.03■□□□□ 0.32
SMPD4-202ENST00000409031 XKR4Q5GH76 650 aa17.03■□□□□ 0.32
SMPD4-202ENST00000409031 TMED4Q7Z7H5 227 aa17.03■□□□□ 0.32
SMPD4-202ENST00000409031 FUBP3Q96I24 572 aaKnown RBP eCLIP17.03■□□□□ 0.32
SMPD4-202ENST00000409031 MARCH4Q9P2E8 410 aaPredicted RBP17.03■□□□□ 0.32
SMPD4-202ENST00000409031 LOC285095A0A1B0GVY8 99 aa17.03■□□□□ 0.32
SMPD4-202ENST00000409031 SOWAHBA6NEL2 793 aa17.03■□□□□ 0.32
SMPD4-202ENST00000409031 F5H0A9 414 aaPredicted RBP17.03■□□□□ 0.32
SMPD4-202ENST00000409031 GTPBP1O00178 669 aaKnown RBP17.03■□□□□ 0.32
SMPD4-202ENST00000409031 LRRTM2O43300 516 aa17.03■□□□□ 0.32
SMPD4-202ENST00000409031 ARHGEF15O94989 841 aa17.03■□□□□ 0.32
SMPD4-202ENST00000409031 C6orf47O95873 294 aa17.03■□□□□ 0.32
SMPD4-202ENST00000409031 TGFB1P01137 390 aa17.03■□□□□ 0.32
SMPD4-202ENST00000409031 CNR2P34972 360 aa17.03■□□□□ 0.32
SMPD4-202ENST00000409031 SAMD14Q8IZD0 417 aaPredicted RBP17.03■□□□□ 0.32
SMPD4-202ENST00000409031 ADGRG2Q8IZP9 1017 aa17.03■□□□□ 0.32
SMPD4-202ENST00000409031 ZNF676Q8N7Q3 588 aa17.03■□□□□ 0.32
SMPD4-202ENST00000409031 RAET1EQ8TD07 263 aa17.03■□□□□ 0.32
SMPD4-202ENST00000409031 LRR1Q96L50 414 aa17.03■□□□□ 0.32
SMPD4-202ENST00000409031 MRPL17Q9NRX2 175 aaKnown RBP17.03■□□□□ 0.32
SMPD4-202ENST00000409031 SCP2D1Q9UJQ7 156 aa17.03■□□□□ 0.32
SMPD4-202ENST00000409031 FZD1Q9UP38 647 aa17.03■□□□□ 0.32
SMPD4-202ENST00000409031 XKRYO14609 159 aa17.02■□□□□ 0.32
SMPD4-202ENST00000409031 BMP1P13497 986 aa17.02■□□□□ 0.32
SMPD4-202ENST00000409031 COL28A1Q2UY09 1125 aa17.02■□□□□ 0.32
SMPD4-202ENST00000409031 GTF2IRD2BQ6EKJ0 949 aa17.02■□□□□ 0.32
SMPD4-202ENST00000409031 CREB3L2Q70SY1 520 aa17.02■□□□□ 0.32
SMPD4-202ENST00000409031 GTF2IRD2Q86UP8 949 aa17.02■□□□□ 0.32
SMPD4-202ENST00000409031 GID4Q8IVV7 300 aa17.02■□□□□ 0.32
SMPD4-202ENST00000409031 FAM217AQ8IXS0 508 aa17.02■□□□□ 0.32
SMPD4-202ENST00000409031 CLDN19Q8N6F1 224 aa17.02■□□□□ 0.32
SMPD4-202ENST00000409031 ZNF366Q8N895 744 aa17.02■□□□□ 0.32
SMPD4-202ENST00000409031 OR6K6Q8NGW6 343 aa17.02■□□□□ 0.32
SMPD4-202ENST00000409031 CNOT2Q9NZN8 540 aaKnown RBP17.02■□□□□ 0.32
SMPD4-202ENST00000409031 VAPAQ9P0L0 249 aa17.02■□□□□ 0.32
SMPD4-202ENST00000409031 FCF1Q9Y324 198 aaKnown RBP17.02■□□□□ 0.32
SMPD4-202ENST00000409031 CD52P31358 61 aa17.02■□□□□ 0.32
SMPD4-202ENST00000409031 IDUAP35475 653 aa17.02■□□□□ 0.32
SMPD4-202ENST00000409031 PYHIN1Q6K0P9 492 aa17.02■□□□□ 0.32
SMPD4-202ENST00000409031 ULK3Q6PHR2 472 aa17.02■□□□□ 0.32
SMPD4-202ENST00000409031 LHFPL3Q86UP9 236 aa17.02■□□□□ 0.32
SMPD4-202ENST00000409031 RETREG3Q86VR2 466 aa17.02■□□□□ 0.32
SMPD4-202ENST00000409031 ADAMTS19Q8TE59 1207 aa17.02■□□□□ 0.32
SMPD4-202ENST00000409031 MAFIPQ8WZ33 124 aa17.02■□□□□ 0.32
SMPD4-202ENST00000409031 RIPOR3Q96MK2 946 aa17.02■□□□□ 0.32
SMPD4-202ENST00000409031 TM9SF2Q99805 663 aa17.02■□□□□ 0.32
SMPD4-202ENST00000409031 OR51J1Q9H342 316 aa17.02■□□□□ 0.32
SMPD4-202ENST00000409031 LYARQ9NX58 379 aaKnown RBP17.02■□□□□ 0.32
SMPD4-202ENST00000409031 MMP3P08254 477 aa17.02■□□□□ 0.31
SMPD4-202ENST00000409031 CBX5P45973 191 aa17.02■□□□□ 0.31
SMPD4-202ENST00000409031 ZNF354BQ96LW1 612 aa17.02■□□□□ 0.31
SMPD4-202ENST00000409031 TRIB3Q96RU7 358 aa17.02■□□□□ 0.31
SMPD4-202ENST00000409031 SECISBP2Q96T21 854 aaKnown RBP17.02■□□□□ 0.31
SMPD4-202ENST00000409031 RBCK1Q9BYM8 510 aa17.02■□□□□ 0.31
SMPD4-202ENST00000409031 ZNF350Q9GZX5 532 aa17.02■□□□□ 0.31
SMPD4-202ENST00000409031 NUBP2Q9Y5Y2 271 aa17.02■□□□□ 0.31
SMPD4-202ENST00000409031 TGM6O95932 706 aa17.02■□□□□ 0.31
SMPD4-202ENST00000409031 DDOSTP39656 456 aa17.02■□□□□ 0.31
SMPD4-202ENST00000409031 TRAM2Q15035 370 aa17.02■□□□□ 0.31
SMPD4-202ENST00000409031 GALNT7Q86SF2 657 aa17.02■□□□□ 0.31
SMPD4-202ENST00000409031 PHYKPLQ8IUZ5 450 aa17.02■□□□□ 0.31
SMPD4-202ENST00000409031 BEND7Q8N7W2 519 aaPredicted RBP17.02■□□□□ 0.31
SMPD4-202ENST00000409031 GNPDA2Q8TDQ7 276 aa17.02■□□□□ 0.31
SMPD4-202ENST00000409031 CIDECQ96AQ7 238 aaPredicted RBP17.02■□□□□ 0.31
SMPD4-202ENST00000409031 SGTBQ96EQ0 304 aa17.02■□□□□ 0.31
SMPD4-202ENST00000409031 ELMOD3Q96FG2 381 aa17.02■□□□□ 0.31
SMPD4-202ENST00000409031 PAK4O96013 591 aaPredicted RBP17.01■□□□□ 0.31
SMPD4-202ENST00000409031 PITX1P78337 314 aaPredicted RBP17.01■□□□□ 0.31
SMPD4-202ENST00000409031 CREB5Q02930 508 aa17.01■□□□□ 0.31
SMPD4-202ENST00000409031 ZNF763Q0D2J5 394 aa17.01■□□□□ 0.31
SMPD4-202ENST00000409031 AIMP2Q13155 320 aaKnown RBP17.01■□□□□ 0.31
SMPD4-202ENST00000409031 ZNF648Q5T619 568 aaPredicted RBP17.01■□□□□ 0.31
SMPD4-202ENST00000409031 SPATC1Q76KD6 591 aa17.01■□□□□ 0.31
SMPD4-202ENST00000409031 GATAD2BQ8WXI9 593 aa17.01■□□□□ 0.31
SMPD4-202ENST00000409031 HDHD5Q9BXW7 423 aa17.01■□□□□ 0.31
SMPD4-202ENST00000409031 BCL2L14Q9BZR8 327 aa17.01■□□□□ 0.31
SMPD4-202ENST00000409031 PCBD2Q9H0N5 130 aa17.01■□□□□ 0.31
SMPD4-202ENST00000409031 GLTPQ9NZD2 209 aa17.01■□□□□ 0.31
SMPD4-202ENST00000409031 CD300AQ9UGN4 299 aa17.01■□□□□ 0.31
SMPD4-202ENST00000409031 TRAV19A0A0A6YYK7 116 aa17.01■□□□□ 0.31
SMPD4-202ENST00000409031 SAP18O00422 153 aaKnown RBP17.01■□□□□ 0.31
SMPD4-202ENST00000409031 RBBP9O75884 186 aa17.01■□□□□ 0.31
SMPD4-202ENST00000409031 ACADMP11310 421 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms