RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 SLC5A8Q8N695 610 aa10.59□□□□□ -0.71
CACNA1C-216ENST00000399638 ZNF709Q8N972 641 aa10.59□□□□□ -0.71
CACNA1C-216ENST00000399638 FAM47BQ8NA70 645 aa10.59□□□□□ -0.71
CACNA1C-216ENST00000399638 GALNT6Q8NCL4 622 aa10.59□□□□□ -0.71
CACNA1C-216ENST00000399638 SMPDL3AQ92484 453 aa10.59□□□□□ -0.71
CACNA1C-216ENST00000399638 FAM84AQ96KN4 292 aa10.59□□□□□ -0.71
CACNA1C-216ENST00000399638 C7orf50Q9BRJ6 194 aaKnown RBP10.59□□□□□ -0.71
CACNA1C-216ENST00000399638 ZCCHC3Q9NUD5 404 aaKnown RBP10.59□□□□□ -0.71
CACNA1C-216ENST00000399638 A0A1W2PRB8 838 aa10.59□□□□□ -0.71
CACNA1C-216ENST00000399638 H0YJX3 145 aa10.59□□□□□ -0.71
CACNA1C-216ENST00000399638 MATN3O15232 486 aa10.59□□□□□ -0.71
CACNA1C-216ENST00000399638 AGR2O95994 175 aa10.59□□□□□ -0.71
CACNA1C-216ENST00000399638 SPARCP09486 303 aa10.59□□□□□ -0.71
CACNA1C-216ENST00000399638 GNRHRP30968 328 aa10.59□□□□□ -0.71
CACNA1C-216ENST00000399638 POLR2JP52435 117 aaKnown RBP10.59□□□□□ -0.71
CACNA1C-216ENST00000399638 RFTN1Q14699 578 aaPredicted RBP10.59□□□□□ -0.71
CACNA1C-216ENST00000399638 ARRDC3Q96B67 414 aa10.59□□□□□ -0.71
CACNA1C-216ENST00000399638 SDSLQ96GA7 329 aa10.59□□□□□ -0.71
CACNA1C-216ENST00000399638 TMEM74Q96NL1 305 aa10.59□□□□□ -0.71
CACNA1C-216ENST00000399638 HBEGFQ99075 208 aa10.59□□□□□ -0.71
CACNA1C-216ENST00000399638 Q9Y3F1 56 aa10.59□□□□□ -0.71
CACNA1C-216ENST00000399638 H7C1Q1 480 aa10.59□□□□□ -0.71
CACNA1C-216ENST00000399638 CCNKO75909 580 aa10.59□□□□□ -0.71
CACNA1C-216ENST00000399638 PIAS1O75925 651 aa10.59□□□□□ -0.71
CACNA1C-216ENST00000399638 PSKH1P11801 424 aa10.59□□□□□ -0.71
CACNA1C-216ENST00000399638 ZNF14P17017 642 aaPredicted RBP10.59□□□□□ -0.71
CACNA1C-216ENST00000399638 PTGIRP43119 386 aa10.59□□□□□ -0.71
CACNA1C-216ENST00000399638 EEF1A1P68104 462 aaKnown RBP10.59□□□□□ -0.71
CACNA1C-216ENST00000399638 EEF1A1P5Q5VTE0 462 aa10.59□□□□□ -0.71
CACNA1C-216ENST00000399638 PEX13Q92968 403 aa10.59□□□□□ -0.71
CACNA1C-216ENST00000399638 BSCL2Q96G97 398 aaPredicted RBP10.59□□□□□ -0.71
CACNA1C-216ENST00000399638 AURKBQ96GD4 344 aaPredicted RBP10.59□□□□□ -0.71
CACNA1C-216ENST00000399638 SFXN2Q96NB2 322 aa10.59□□□□□ -0.71
CACNA1C-216ENST00000399638 SLC25A51Q9H1U9 297 aa10.59□□□□□ -0.71
CACNA1C-216ENST00000399638 OR10A4Q9H209 315 aa10.59□□□□□ -0.71
CACNA1C-216ENST00000399638 DECR2Q9NUI1 292 aa10.59□□□□□ -0.71
CACNA1C-216ENST00000399638 PPM1HQ9ULR3 514 aa10.59□□□□□ -0.71
CACNA1C-216ENST00000399638 RAP2CQ9Y3L5 183 aa10.59□□□□□ -0.71
CACNA1C-216ENST00000399638 hCG_1818297A0A087WSY0 165 aa10.59□□□□□ -0.71
CACNA1C-216ENST00000399638 A6NHS1 94 aa10.59□□□□□ -0.71
CACNA1C-216ENST00000399638 H3BML4 177 aa10.59□□□□□ -0.71
CACNA1C-216ENST00000399638 K7EPK0 472 aa10.59□□□□□ -0.71
CACNA1C-216ENST00000399638 CLDN7O95471 211 aa10.59□□□□□ -0.71
CACNA1C-216ENST00000399638 COX4I1P13073 169 aa10.59□□□□□ -0.71
CACNA1C-216ENST00000399638 ACSL1P33121 698 aa10.59□□□□□ -0.71
CACNA1C-216ENST00000399638 MPP1Q00013 466 aa10.59□□□□□ -0.71
CACNA1C-216ENST00000399638 NSDHLQ15738 373 aa10.59□□□□□ -0.71
CACNA1C-216ENST00000399638 DCST2Q5T1A1 773 aa10.59□□□□□ -0.71
CACNA1C-216ENST00000399638 DRICH1Q6PGQ1 229 aaPredicted RBP10.59□□□□□ -0.71
CACNA1C-216ENST00000399638 PHC2Q8IXK0 858 aa10.59□□□□□ -0.71
CACNA1C-216ENST00000399638 FAM71E2Q8N5Q1 922 aa10.59□□□□□ -0.71
CACNA1C-216ENST00000399638 ZNF784Q8NCA9 323 aaPredicted RBP10.59□□□□□ -0.71
CACNA1C-216ENST00000399638 OR5AK3PQ8NH89 298 aa10.59□□□□□ -0.71
CACNA1C-216ENST00000399638 PYCR2Q96C36 320 aa10.59□□□□□ -0.71
CACNA1C-216ENST00000399638 PLEKHA3Q9HB20 300 aa10.59□□□□□ -0.71
CACNA1C-216ENST00000399638 SPAG4Q9NPE6 437 aa10.59□□□□□ -0.71
CACNA1C-216ENST00000399638 MTHFD2P13995 350 aa10.59□□□□□ -0.71
CACNA1C-216ENST00000399638 SRP14P37108 136 aaKnown RBP10.59□□□□□ -0.71
CACNA1C-216ENST00000399638 GNB2P62879 340 aa10.59□□□□□ -0.71
CACNA1C-216ENST00000399638 TIGD2Q4W5G0 525 aa10.59□□□□□ -0.71
CACNA1C-216ENST00000399638 SH3D19Q5HYK7 790 aa10.59□□□□□ -0.71
CACNA1C-216ENST00000399638 KDELC1Q6UW63 502 aa10.59□□□□□ -0.71
CACNA1C-216ENST00000399638 AMER2Q8N7J2 671 aa10.59□□□□□ -0.71
CACNA1C-216ENST00000399638 JOSD2Q8TAC2 188 aa10.59□□□□□ -0.71
CACNA1C-216ENST00000399638 PNPLA3Q9NST1 481 aa10.59□□□□□ -0.71
CACNA1C-216ENST00000399638 C14orf105Q9NVL8 296 aa10.59□□□□□ -0.71
CACNA1C-216ENST00000399638 PRODH2Q9UF12 536 aa10.59□□□□□ -0.71
CACNA1C-216ENST00000399638 BCKDHAP12694 445 aa10.58□□□□□ -0.72
CACNA1C-216ENST00000399638 KCNQ1P51787 676 aa10.58□□□□□ -0.72
CACNA1C-216ENST00000399638 GBX2P52951 348 aaPredicted RBP10.58□□□□□ -0.72
CACNA1C-216ENST00000399638 RRADP55042 308 aa10.58□□□□□ -0.72
CACNA1C-216ENST00000399638 AIMP2Q13155 320 aaKnown RBP10.58□□□□□ -0.72
CACNA1C-216ENST00000399638 CLEC12AQ5QGZ9 265 aa10.58□□□□□ -0.72
CACNA1C-216ENST00000399638 LCTLQ6UWM7 567 aa10.58□□□□□ -0.72
CACNA1C-216ENST00000399638 FRMD7Q6ZUT3 714 aa10.58□□□□□ -0.72
CACNA1C-216ENST00000399638 CUZD1Q86UP6 607 aa10.58□□□□□ -0.72
CACNA1C-216ENST00000399638 FAM86B1Q8N7N1 296 aa10.58□□□□□ -0.72
CACNA1C-216ENST00000399638 OR4D6Q8NGJ1 314 aa10.58□□□□□ -0.72
CACNA1C-216ENST00000399638 RTKNQ9BST9 563 aa10.58□□□□□ -0.72
CACNA1C-216ENST00000399638 AGPAT4Q9NRZ5 378 aa10.58□□□□□ -0.72
CACNA1C-216ENST00000399638 THRBP10828 461 aa10.58□□□□□ -0.72
CACNA1C-216ENST00000399638 SLC5A9Q2M3M2 681 aa10.58□□□□□ -0.72
CACNA1C-216ENST00000399638 FBXO43Q4G163 708 aa10.58□□□□□ -0.72
CACNA1C-216ENST00000399638 VWA2Q5GFL6 755 aa10.58□□□□□ -0.72
CACNA1C-216ENST00000399638 KRBOX4Q5JUW0 171 aa10.58□□□□□ -0.72
CACNA1C-216ENST00000399638 SUSD1Q6UWL2 747 aa10.58□□□□□ -0.72
CACNA1C-216ENST00000399638 ASB18Q6ZVZ8 466 aa10.58□□□□□ -0.72
CACNA1C-216ENST00000399638 PRR18Q8N4B5 295 aa10.58□□□□□ -0.72
CACNA1C-216ENST00000399638 INO80EQ8NBZ0 244 aaPredicted RBP10.58□□□□□ -0.72
CACNA1C-216ENST00000399638 HNRNPABQ99729 332 aaKnown RBP10.58□□□□□ -0.72
CACNA1C-216ENST00000399638 MTMR10Q9NXD2 777 aa10.58□□□□□ -0.72
CACNA1C-216ENST00000399638 GPRC5BQ9NZH0 403 aa10.58□□□□□ -0.72
CACNA1C-216ENST00000399638 TRAF6Q9Y4K3 522 aa10.58□□□□□ -0.72
CACNA1C-216ENST00000399638 PCDHGB2Q9Y5G2 931 aa10.58□□□□□ -0.72
CACNA1C-216ENST00000399638 HS3ST4Q9Y661 456 aa10.58□□□□□ -0.72
CACNA1C-216ENST00000399638 DAPL1A0PJW8 107 aa10.58□□□□□ -0.72
CACNA1C-216ENST00000399638 PRICKLE3O43900 615 aaPredicted RBP10.58□□□□□ -0.72
CACNA1C-216ENST00000399638 EPHA3P29320 983 aa10.58□□□□□ -0.72
CACNA1C-216ENST00000399638 PTGER3P43115 390 aa10.58□□□□□ -0.72
CACNA1C-216ENST00000399638 CDH12P55289 794 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms