RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 LIM2P55344 173 aa13.24□□□□□ -0.29
HLA-DQB1-202ENST00000399079 RPS13P62277 151 aaKnown RBP13.24□□□□□ -0.29
HLA-DQB1-202ENST00000399079 SFT2D3Q587I9 215 aa13.24□□□□□ -0.29
HLA-DQB1-202ENST00000399079 IRAK1BP1Q5VVH5 260 aa13.24□□□□□ -0.29
HLA-DQB1-202ENST00000399079 KHDRBS2Q5VWX1 349 aaKnown RBP13.24□□□□□ -0.29
HLA-DQB1-202ENST00000399079 JMJD6Q6NYC1 403 aaPredicted RBP13.24□□□□□ -0.29
HLA-DQB1-202ENST00000399079 LINC00696Q6ZRV3 163 aa13.24□□□□□ -0.29
HLA-DQB1-202ENST00000399079 CHSY3Q70JA7 882 aa13.24□□□□□ -0.29
HLA-DQB1-202ENST00000399079 LCA5Q86VQ0 697 aa13.24□□□□□ -0.29
HLA-DQB1-202ENST00000399079 SIRT6Q8N6T7 355 aa13.24□□□□□ -0.29
HLA-DQB1-202ENST00000399079 FAM47BQ8NA70 645 aa13.24□□□□□ -0.29
HLA-DQB1-202ENST00000399079 WDR20Q8TBZ3 569 aa13.24□□□□□ -0.29
HLA-DQB1-202ENST00000399079 BRIX1Q8TDN6 353 aaKnown RBP13.24□□□□□ -0.29
HLA-DQB1-202ENST00000399079 CMTM7Q96FZ5 175 aa13.24□□□□□ -0.29
HLA-DQB1-202ENST00000399079 KCNC2Q96PR1 638 aa13.24□□□□□ -0.29
HLA-DQB1-202ENST00000399079 SERINC2Q96SA4 455 aa13.24□□□□□ -0.29
HLA-DQB1-202ENST00000399079 CSF3RQ99062 836 aa13.24□□□□□ -0.29
HLA-DQB1-202ENST00000399079 TUBB6Q9BUF5 446 aa13.24□□□□□ -0.29
HLA-DQB1-202ENST00000399079 NTMT1Q9BV86 223 aa13.24□□□□□ -0.29
HLA-DQB1-202ENST00000399079 C12orf65Q9H3J6 166 aaKnown RBP13.24□□□□□ -0.29
HLA-DQB1-202ENST00000399079 COPS7BQ9H9Q2 264 aaPredicted RBP13.24□□□□□ -0.29
HLA-DQB1-202ENST00000399079 DMRT3Q9NQL9 472 aa13.24□□□□□ -0.29
HLA-DQB1-202ENST00000399079 NECTIN3Q9NQS3 549 aa13.24□□□□□ -0.29
HLA-DQB1-202ENST00000399079 C5AR2Q9P296 337 aa13.24□□□□□ -0.29
HLA-DQB1-202ENST00000399079 C19orf25Q9UFG5 118 aaPredicted RBP13.24□□□□□ -0.29
HLA-DQB1-202ENST00000399079 EMCNQ9ULC0 261 aa13.24□□□□□ -0.29
HLA-DQB1-202ENST00000399079 DAPP1Q9UN19 280 aa13.24□□□□□ -0.29
HLA-DQB1-202ENST00000399079 A0A088AWK7 358 aa13.23□□□□□ -0.29
HLA-DQB1-202ENST00000399079 CDH16O75309 829 aa13.23□□□□□ -0.29
HLA-DQB1-202ENST00000399079 ETHE1O95571 254 aa13.23□□□□□ -0.29
HLA-DQB1-202ENST00000399079 SERPINA7P05543 415 aa13.23□□□□□ -0.29
HLA-DQB1-202ENST00000399079 GSTA1P08263 222 aa13.23□□□□□ -0.29
HLA-DQB1-202ENST00000399079 TAC1P20366 129 aa13.23□□□□□ -0.29
HLA-DQB1-202ENST00000399079 ZNF10P21506 573 aaPredicted RBP13.23□□□□□ -0.29
HLA-DQB1-202ENST00000399079 ATP5A1P25705 553 aaKnown RBP13.23□□□□□ -0.29
HLA-DQB1-202ENST00000399079 PIK3CBP42338 1070 aa13.23□□□□□ -0.29
HLA-DQB1-202ENST00000399079 OR4D2P58180 307 aa13.23□□□□□ -0.29
HLA-DQB1-202ENST00000399079 HERVK_113P63132 956 aa13.23□□□□□ -0.29
HLA-DQB1-202ENST00000399079 TGM3Q08188 693 aa13.23□□□□□ -0.29
HLA-DQB1-202ENST00000399079 BTBD16Q32M84 506 aa13.23□□□□□ -0.29
HLA-DQB1-202ENST00000399079 DEPDC1Q5TB30 811 aa13.23□□□□□ -0.29
HLA-DQB1-202ENST00000399079 B3GNTL1Q67FW5 361 aaPredicted RBP13.23□□□□□ -0.29
HLA-DQB1-202ENST00000399079 SLC6A19Q695T7 634 aa13.23□□□□□ -0.29
HLA-DQB1-202ENST00000399079 EMBQ6PCB8 327 aa13.23□□□□□ -0.29
HLA-DQB1-202ENST00000399079 IGFL3Q6UXB1 125 aa13.23□□□□□ -0.29
HLA-DQB1-202ENST00000399079 QSOX2Q6ZRP7 698 aa13.23□□□□□ -0.29
HLA-DQB1-202ENST00000399079 ACOT4Q8N9L9 421 aa13.23□□□□□ -0.29
HLA-DQB1-202ENST00000399079 OR4F6Q8NGB9 312 aa13.23□□□□□ -0.29
HLA-DQB1-202ENST00000399079 TRPC4APQ8TEL6 797 aa13.23□□□□□ -0.29
HLA-DQB1-202ENST00000399079 ZNF483Q8TF39 744 aaPredicted RBP13.23□□□□□ -0.29
HLA-DQB1-202ENST00000399079 TMEM237Q96Q45 408 aa13.23□□□□□ -0.29
HLA-DQB1-202ENST00000399079 MAPKAP1Q9BPZ7 522 aa13.23□□□□□ -0.29
HLA-DQB1-202ENST00000399079 TBCDQ9BTW9 1192 aa13.23□□□□□ -0.29
HLA-DQB1-202ENST00000399079 NPLQ9BXD5 320 aaPredicted RBP13.23□□□□□ -0.29
HLA-DQB1-202ENST00000399079 C1QTNF3Q9BXJ4 246 aa13.23□□□□□ -0.29
HLA-DQB1-202ENST00000399079 ERVK-6Q9BXR3 956 aa13.23□□□□□ -0.29
HLA-DQB1-202ENST00000399079 PPCSQ9HAB8 311 aa13.23□□□□□ -0.29
HLA-DQB1-202ENST00000399079 PTGFRNQ9P2B2 879 aa13.23□□□□□ -0.29
HLA-DQB1-202ENST00000399079 DCDC2Q9UHG0 476 aa13.23□□□□□ -0.29
HLA-DQB1-202ENST00000399079 ADGRE2Q9UHX3 823 aa13.23□□□□□ -0.29
HLA-DQB1-202ENST00000399079 ZNF225Q9UK10 706 aa13.23□□□□□ -0.29
HLA-DQB1-202ENST00000399079 TSC22D4Q9Y3Q8 395 aa13.23□□□□□ -0.29
HLA-DQB1-202ENST00000399079 CNTRLQ7Z7A1 2325 aa13.23□□□□□ -0.29
HLA-DQB1-202ENST00000399079 NBASA2RRP1 2371 aa13.23□□□□□ -0.29
HLA-DQB1-202ENST00000399079 IGKV3D-11A0A0A0MRZ8 115 aa13.23□□□□□ -0.29
HLA-DQB1-202ENST00000399079 TGFBR3LH3BV60 316 aa13.23□□□□□ -0.29
HLA-DQB1-202ENST00000399079 J3QKU1 62 aa13.23□□□□□ -0.29
HLA-DQB1-202ENST00000399079 CYR61O00622 381 aa13.23□□□□□ -0.29
HLA-DQB1-202ENST00000399079 PLPP1O14494 284 aa13.23□□□□□ -0.29
HLA-DQB1-202ENST00000399079 SUPT7LO94864 414 aa13.23□□□□□ -0.29
HLA-DQB1-202ENST00000399079 NUDT17P0C025 328 aa13.23□□□□□ -0.29
HLA-DQB1-202ENST00000399079 KRT4P19013 534 aa13.23□□□□□ -0.29
HLA-DQB1-202ENST00000399079 ATP5F1P24539 256 aaPredicted RBP13.23□□□□□ -0.29
HLA-DQB1-202ENST00000399079 SERPINB1P30740 379 aa13.23□□□□□ -0.29
HLA-DQB1-202ENST00000399079 SSR2P43308 183 aa13.23□□□□□ -0.29
HLA-DQB1-202ENST00000399079 RAB38P57729 211 aa13.23□□□□□ -0.29
HLA-DQB1-202ENST00000399079 ACTN3Q08043 901 aaPredicted RBP13.23□□□□□ -0.29
HLA-DQB1-202ENST00000399079 RASA2Q15283 850 aa13.23□□□□□ -0.29
HLA-DQB1-202ENST00000399079 AP5B1Q2VPB7 878 aa13.23□□□□□ -0.29
HLA-DQB1-202ENST00000399079 PLEKHN1Q494U1 663 aaPredicted RBP13.23□□□□□ -0.29
HLA-DQB1-202ENST00000399079 TMEM35AQ53FP2 167 aa13.23□□□□□ -0.29
HLA-DQB1-202ENST00000399079 UNC50Q53HI1 259 aa13.23□□□□□ -0.29
HLA-DQB1-202ENST00000399079 ZNF678Q5SXM1 525 aa13.23□□□□□ -0.29
HLA-DQB1-202ENST00000399079 LETMD1Q6P1Q0 360 aa13.23□□□□□ -0.29
HLA-DQB1-202ENST00000399079 PAPD4Q6PIY7 484 aaKnown RBP13.23□□□□□ -0.29
HLA-DQB1-202ENST00000399079 MILR1Q7Z6M3 343 aa13.23□□□□□ -0.29
HLA-DQB1-202ENST00000399079 C4orf33Q8N1A6 199 aa13.23□□□□□ -0.29
HLA-DQB1-202ENST00000399079 Q8NA96 180 aa13.23□□□□□ -0.29
HLA-DQB1-202ENST00000399079 SRFBP1Q8NEF9 429 aaKnown RBP13.23□□□□□ -0.29
HLA-DQB1-202ENST00000399079 CAVIN3Q969G5 261 aa13.23□□□□□ -0.29
HLA-DQB1-202ENST00000399079 REPS1Q96D71 796 aa13.23□□□□□ -0.29
HLA-DQB1-202ENST00000399079 MAGEB10Q96LZ2 347 aaPredicted RBP13.23□□□□□ -0.29
HLA-DQB1-202ENST00000399079 PRDM9Q9NQV7 894 aa13.23□□□□□ -0.29
HLA-DQB1-202ENST00000399079 KCMF1Q9P0J7 381 aa13.23□□□□□ -0.29
HLA-DQB1-202ENST00000399079 CLDN16Q9Y5I7 305 aa13.23□□□□□ -0.29
HLA-DQB1-202ENST00000399079 MYOCOSA0A1B0GUC4 107 aa13.22□□□□□ -0.29
HLA-DQB1-202ENST00000399079 TCRBV16S1A1N1A0A5B0 115 aa13.22□□□□□ -0.29
HLA-DQB1-202ENST00000399079 TTLL8A6PVC2 850 aa13.22□□□□□ -0.29
HLA-DQB1-202ENST00000399079 A8MUA0 341 aa13.22□□□□□ -0.29
HLA-DQB1-202ENST00000399079 G3V2L1 256 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms