RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 A0A0A6YYC8 382 aaPredicted RBP20.09■□□□□ 0.81
CPNE1-204ENST00000397443 HYKKA2RU49 373 aa20.09■□□□□ 0.81
CPNE1-204ENST00000397443 GLOD5A6NK44 160 aa20.09■□□□□ 0.81
CPNE1-204ENST00000397443 I3L1I5 382 aaPredicted RBP20.09■□□□□ 0.81
CPNE1-204ENST00000397443 SGK494L7N484 410 aa20.09■□□□□ 0.81
CPNE1-204ENST00000397443 TXNDC9O14530 226 aa20.09■□□□□ 0.81
CPNE1-204ENST00000397443 SCAMP2O15127 329 aaKnown RBP20.09■□□□□ 0.81
CPNE1-204ENST00000397443 ANKRD34CP0C6C1 535 aa20.09■□□□□ 0.81
CPNE1-204ENST00000397443 SMIM10L1P0DMW3 83 aa20.09■□□□□ 0.81
CPNE1-204ENST00000397443 HNRNPH2P55795 449 aaKnown RBP20.09■□□□□ 0.81
CPNE1-204ENST00000397443 STX5Q13190 355 aa20.09■□□□□ 0.81
CPNE1-204ENST00000397443 TCTE1Q5JU00 501 aa20.09■□□□□ 0.81
CPNE1-204ENST00000397443 MANEAQ5SRI9 462 aa20.09■□□□□ 0.81
CPNE1-204ENST00000397443 FAM71E1Q6IPT2 247 aa20.09■□□□□ 0.81
CPNE1-204ENST00000397443 KIF2BQ8N4N8 673 aa20.09■□□□□ 0.81
CPNE1-204ENST00000397443 GLB1L3Q8NCI6 653 aaPredicted RBP20.09■□□□□ 0.81
CPNE1-204ENST00000397443 OR5T3Q8NGG3 340 aa20.09■□□□□ 0.81
CPNE1-204ENST00000397443 PUM2Q8TB72 1066 aaKnown RBP eCLIP20.09■□□□□ 0.818e-8■■■■■ 32.7
CPNE1-204ENST00000397443 UCN3Q969E3 161 aa20.09■□□□□ 0.81
CPNE1-204ENST00000397443 SLC7A6OSQ96CW6 309 aaPredicted RBP20.09■□□□□ 0.81
CPNE1-204ENST00000397443 SMIM10Q96HG1 83 aa20.09■□□□□ 0.81
CPNE1-204ENST00000397443 C10orf90Q96M02 699 aa20.09■□□□□ 0.81
CPNE1-204ENST00000397443 MAPKAP1Q9BPZ7 522 aa20.09■□□□□ 0.81
CPNE1-204ENST00000397443 MIEF1Q9NQG6 463 aa20.09■□□□□ 0.81
CPNE1-204ENST00000397443 NDUFAF1Q9Y375 327 aa20.09■□□□□ 0.81
CPNE1-204ENST00000397443 HCN4Q9Y3Q4 1203 aa20.09■□□□□ 0.81
CPNE1-204ENST00000397443 ATG4BQ9Y4P1 393 aa20.09■□□□□ 0.81
CPNE1-204ENST00000397443 ADAMTS20P59510 1910 aa20.08■□□□□ 0.81
CPNE1-204ENST00000397443 ASPDHA6ND91 283 aa20.08■□□□□ 0.81
CPNE1-204ENST00000397443 GABRR3A8MPY1 467 aa20.08■□□□□ 0.81
CPNE1-204ENST00000397443 HYAL3O43820 417 aaPredicted RBP20.08■□□□□ 0.81
CPNE1-204ENST00000397443 B3GALT2O43825 422 aa20.08■□□□□ 0.81
CPNE1-204ENST00000397443 SLC34A2O95436 690 aa20.08■□□□□ 0.81
CPNE1-204ENST00000397443 PGRP06401 933 aa20.08■□□□□ 0.81
CPNE1-204ENST00000397443 PIM1P11309 404 aaPredicted RBP20.08■□□□□ 0.81
CPNE1-204ENST00000397443 S100A3P33764 101 aa20.08■□□□□ 0.81
CPNE1-204ENST00000397443 SLC25A3Q00325 362 aa20.08■□□□□ 0.81
CPNE1-204ENST00000397443 OR4F3Q6IEY1 312 aa20.08■□□□□ 0.81
CPNE1-204ENST00000397443 SLC2A7Q6PXP3 512 aa20.08■□□□□ 0.81
CPNE1-204ENST00000397443 RETREG3Q86VR2 466 aa20.08■□□□□ 0.81
CPNE1-204ENST00000397443 ANKRD46Q86W74 232 aa20.08■□□□□ 0.81
CPNE1-204ENST00000397443 RBM15BQ8NDT2 890 aaKnown RBP20.08■□□□□ 0.81
CPNE1-204ENST00000397443 ZNF285Q96NJ3 590 aa20.08■□□□□ 0.81
CPNE1-204ENST00000397443 OR6C1Q96RD1 312 aa20.08■□□□□ 0.81
CPNE1-204ENST00000397443 FANCEQ9HB96 536 aa20.08■□□□□ 0.81
CPNE1-204ENST00000397443 ANKHQ9HCJ1 492 aa20.08■□□□□ 0.81
CPNE1-204ENST00000397443 SLC52A3Q9NQ40 469 aa20.08■□□□□ 0.81
CPNE1-204ENST00000397443 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.08■□□□□ 0.818e-7■□□□□ 11.1
CPNE1-204ENST00000397443 PTPRZ1P23471 2315 aaPredicted RBP20.08■□□□□ 0.8
CPNE1-204ENST00000397443 A0A088AWK7 358 aa20.08■□□□□ 0.8
CPNE1-204ENST00000397443 A0A1W2PP18 115 aa20.08■□□□□ 0.8
CPNE1-204ENST00000397443 MRASO14807 208 aa20.08■□□□□ 0.8
CPNE1-204ENST00000397443 RDH16O75452 317 aa20.08■□□□□ 0.8
CPNE1-204ENST00000397443 ATP5HO75947 161 aa20.08■□□□□ 0.8
CPNE1-204ENST00000397443 LAMP1P11279 417 aa20.08■□□□□ 0.8
CPNE1-204ENST00000397443 ZNF10P21506 573 aaPredicted RBP20.08■□□□□ 0.8
CPNE1-204ENST00000397443 PHC1P78364 1004 aa20.08■□□□□ 0.8
CPNE1-204ENST00000397443 KLC1Q07866 573 aa20.08■□□□□ 0.8
CPNE1-204ENST00000397443 NDUFAF5Q5TEU4 345 aa20.08■□□□□ 0.8
CPNE1-204ENST00000397443 GPR135Q8IZ08 494 aa20.08■□□□□ 0.8
CPNE1-204ENST00000397443 ZCCHC7Q8N3Z6 543 aaKnown RBP20.08■□□□□ 0.8
CPNE1-204ENST00000397443 DEFB124Q8NES8 71 aa20.08■□□□□ 0.8
CPNE1-204ENST00000397443 TESCQ96BS2 214 aa20.08■□□□□ 0.8
CPNE1-204ENST00000397443 ZNF501Q96CX3 271 aaPredicted RBP20.08■□□□□ 0.8
CPNE1-204ENST00000397443 OR52E6Q96RD3 313 aa20.08■□□□□ 0.8
CPNE1-204ENST00000397443 SERINC2Q96SA4 455 aa20.08■□□□□ 0.8
CPNE1-204ENST00000397443 RTKNQ9BST9 563 aa20.08■□□□□ 0.8
CPNE1-204ENST00000397443 REEP4Q9H6H4 257 aa20.08■□□□□ 0.8
CPNE1-204ENST00000397443 SERTAD3Q9UJW9 196 aa20.08■□□□□ 0.8
CPNE1-204ENST00000397443 SLC22A7Q9Y694 548 aa20.08■□□□□ 0.8
CPNE1-204ENST00000397443 SEC16AO15027 2179 aa20.07■□□□□ 0.8
CPNE1-204ENST00000397443 DMXL1Q9Y485 3027 aa20.07■□□□□ 0.8
CPNE1-204ENST00000397443 WASHC1A8K0Z3 465 aa20.07■□□□□ 0.8
CPNE1-204ENST00000397443 GALR3O60755 368 aaPredicted RBP20.07■□□□□ 0.8
CPNE1-204ENST00000397443 RFPL3O75679 317 aa20.07■□□□□ 0.8
CPNE1-204ENST00000397443 ALAS2P22557 587 aa20.07■□□□□ 0.8
CPNE1-204ENST00000397443 CSTF2P33240 577 aaKnown RBP eCLIP20.07■□□□□ 0.82e-45■■■■■ 66.1
CPNE1-204ENST00000397443 TSFMP43897 325 aaKnown RBP20.07■□□□□ 0.8
CPNE1-204ENST00000397443 MNAT1P51948 309 aa20.07■□□□□ 0.8
CPNE1-204ENST00000397443 PDX1P52945 283 aa20.07■□□□□ 0.8
CPNE1-204ENST00000397443 ITGA1P56199 1179 aa20.07■□□□□ 0.8
CPNE1-204ENST00000397443 ART3Q13508 389 aa20.07■□□□□ 0.8
CPNE1-204ENST00000397443 RUNX2Q13950 521 aa20.07■□□□□ 0.8
CPNE1-204ENST00000397443 GRM7Q14831 915 aa20.07■□□□□ 0.8
CPNE1-204ENST00000397443 C16orf72Q14CZ0 275 aa20.07■□□□□ 0.8
CPNE1-204ENST00000397443 NDUFA9Q16795 377 aa20.07■□□□□ 0.8
CPNE1-204ENST00000397443 PAGE3Q5JUK9 113 aa20.07■□□□□ 0.8
CPNE1-204ENST00000397443 CPTPQ5TA50 214 aa20.07■□□□□ 0.8
CPNE1-204ENST00000397443 C18orf63Q68DL7 685 aa20.07■□□□□ 0.8
CPNE1-204ENST00000397443 TICAM1Q8IUC6 712 aa20.07■□□□□ 0.8
CPNE1-204ENST00000397443 ARHGEF39Q8N4T4 335 aa20.07■□□□□ 0.8
CPNE1-204ENST00000397443 TTC29Q8NA56 475 aaPredicted RBP20.07■□□□□ 0.8
CPNE1-204ENST00000397443 ROGDIQ9GZN7 287 aa20.07■□□□□ 0.8
CPNE1-204ENST00000397443 EFCAB1Q9HAE3 211 aa20.07■□□□□ 0.8
CPNE1-204ENST00000397443 OCIAD1Q9NX40 245 aa20.07■□□□□ 0.8
CPNE1-204ENST00000397443 TAS2R1Q9NYW7 299 aa20.07■□□□□ 0.8
CPNE1-204ENST00000397443 NDOR1Q9UHB4 597 aa20.07■□□□□ 0.8
CPNE1-204ENST00000397443 ASB4Q9Y574 426 aa20.07■□□□□ 0.8
CPNE1-204ENST00000397443 KIF26BQ2KJY2 2108 aa20.06■□□□□ 0.8
CPNE1-204ENST00000397443 NUP214P35658 2090 aaPredicted RBP20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms