RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 CDC25BP30305 580 aa19.64■□□□□ 0.73
TRAF4-203ENST00000394925 NXPE4Q6UWF7 544 aa19.64■□□□□ 0.73
TRAF4-203ENST00000394925 IL20RBQ6UXL0 311 aa19.64■□□□□ 0.73
TRAF4-203ENST00000394925 THOC6Q86W42 341 aaKnown RBP19.64■□□□□ 0.73
TRAF4-203ENST00000394925 OR2M7Q8NG81 312 aa19.64■□□□□ 0.73
TRAF4-203ENST00000394925 GABPB2Q8TAK5 448 aaPredicted RBP19.64■□□□□ 0.73
TRAF4-203ENST00000394925 CREB3L4Q8TEY5 395 aa19.64■□□□□ 0.73
TRAF4-203ENST00000394925 SREK1Q8WXA9 508 aaKnown RBP19.64■□□□□ 0.73
TRAF4-203ENST00000394925 ASB15Q8WXK1 588 aa19.64■□□□□ 0.73
TRAF4-203ENST00000394925 TMUB1Q9BVT8 246 aa19.64■□□□□ 0.73
TRAF4-203ENST00000394925 PRTFDC1Q9NRG1 225 aa19.64■□□□□ 0.73
TRAF4-203ENST00000394925 SLC17A6Q9P2U8 582 aa19.64■□□□□ 0.73
TRAF4-203ENST00000394925 PPIEQ9UNP9 301 aaKnown RBP19.64■□□□□ 0.73
TRAF4-203ENST00000394925 ANKHD1Q8IWZ3 2542 aaKnown RBP19.63■□□□□ 0.73
TRAF4-203ENST00000394925 A0A0G2JMM0 328 aa19.63■□□□□ 0.73
TRAF4-203ENST00000394925 A0A0G2JN53 185 aa19.63■□□□□ 0.73
TRAF4-203ENST00000394925 A0A1W2PPB8 328 aa19.63■□□□□ 0.73
TRAF4-203ENST00000394925 A0A1W2PRS3 328 aa19.63■□□□□ 0.73
TRAF4-203ENST00000394925 KIR3DP1A8MWS1 328 aa19.63■□□□□ 0.73
TRAF4-203ENST00000394925 G3V3Y1 287 aa19.63■□□□□ 0.73
TRAF4-203ENST00000394925 TGFBR3LH3BV60 316 aa19.63■□□□□ 0.73
TRAF4-203ENST00000394925 ACOT7O00154 380 aa19.63■□□□□ 0.73
TRAF4-203ENST00000394925 KLK8O60259 260 aa19.63■□□□□ 0.73
TRAF4-203ENST00000394925 OR2J2O76002 312 aa19.63■□□□□ 0.73
TRAF4-203ENST00000394925 CCDC175P0C221 793 aa19.63■□□□□ 0.73
TRAF4-203ENST00000394925 SAT1P21673 171 aa19.63■□□□□ 0.73
TRAF4-203ENST00000394925 GPR143P51810 404 aa19.63■□□□□ 0.73
TRAF4-203ENST00000394925 RUNX2Q13950 521 aa19.63■□□□□ 0.73
TRAF4-203ENST00000394925 XKR6Q5GH73 641 aa19.63■□□□□ 0.73
TRAF4-203ENST00000394925 ZNF585AQ6P3V2 769 aa19.63■□□□□ 0.73
TRAF4-203ENST00000394925 CCDC137Q6PK04 289 aaKnown RBP19.63■□□□□ 0.73
TRAF4-203ENST00000394925 SCUBE1Q8IWY4 988 aa19.63■□□□□ 0.73
TRAF4-203ENST00000394925 CLYBLQ8N0X4 340 aa19.63■□□□□ 0.73
TRAF4-203ENST00000394925 GPATCH11Q8N954 259 aa19.63■□□□□ 0.73
TRAF4-203ENST00000394925 TRIM58Q8NG06 486 aa19.63■□□□□ 0.73
TRAF4-203ENST00000394925 FAR2Q96K12 515 aa19.63■□□□□ 0.73
TRAF4-203ENST00000394925 ZDHHC11Q9H8X9 412 aa19.63■□□□□ 0.73
TRAF4-203ENST00000394925 IKZF3Q9UKT9 509 aa19.63■□□□□ 0.73
TRAF4-203ENST00000394925 SLC22A14Q9Y267 594 aa19.63■□□□□ 0.73
TRAF4-203ENST00000394925 TMEM200CA6NKL6 621 aa19.62■□□□□ 0.73
TRAF4-203ENST00000394925 BANF1O75531 89 aa19.62■□□□□ 0.73
TRAF4-203ENST00000394925 OR6B1O95007 311 aa19.62■□□□□ 0.73
TRAF4-203ENST00000394925 ENO2P09104 434 aaPredicted RBP19.62■□□□□ 0.73
TRAF4-203ENST00000394925 ACVR2AP27037 513 aa19.62■□□□□ 0.73
TRAF4-203ENST00000394925 HNRNPFP52597 415 aaKnown RBP19.62■□□□□ 0.73
TRAF4-203ENST00000394925 SLC13A2Q13183 592 aa19.62■□□□□ 0.73
TRAF4-203ENST00000394925 GPALPP1Q8IXQ4 340 aa19.62■□□□□ 0.73
TRAF4-203ENST00000394925 TMEM52Q8NDY8 209 aa19.62■□□□□ 0.73
TRAF4-203ENST00000394925 MS4A14Q96JA4 679 aa19.62■□□□□ 0.73
TRAF4-203ENST00000394925 SMC6Q96SB8 1091 aa19.62■□□□□ 0.73
TRAF4-203ENST00000394925 TTTY12Q9BZ98 90 aa19.62■□□□□ 0.73
TRAF4-203ENST00000394925 SLC24A3Q9HC58 644 aa19.62■□□□□ 0.73
TRAF4-203ENST00000394925 CLDN16Q9Y5I7 305 aa19.62■□□□□ 0.73
TRAF4-203ENST00000394925 LIPGQ9Y5X9 500 aa19.62■□□□□ 0.73
TRAF4-203ENST00000394925 KCNE2Q9Y6J6 123 aa19.62■□□□□ 0.73
TRAF4-203ENST00000394925 WWP2O00308 870 aa19.61■□□□□ 0.73
TRAF4-203ENST00000394925 CLDN4O14493 209 aa19.61■□□□□ 0.73
TRAF4-203ENST00000394925 SOX3P41225 446 aa19.61■□□□□ 0.73
TRAF4-203ENST00000394925 HSD17B7P56937 341 aa19.61■□□□□ 0.73
TRAF4-203ENST00000394925 STXBP1P61764 594 aaKnown RBP19.61■□□□□ 0.73
TRAF4-203ENST00000394925 BMPR2Q13873 1038 aa19.61■□□□□ 0.73
TRAF4-203ENST00000394925 SBSNQ6UWP8 590 aa19.61■□□□□ 0.73
TRAF4-203ENST00000394925 ZNF662Q6ZS27 426 aa19.61■□□□□ 0.73
TRAF4-203ENST00000394925 RGS9BPQ6ZS82 235 aa19.61■□□□□ 0.73
TRAF4-203ENST00000394925 SLC22A16Q86VW1 577 aa19.61■□□□□ 0.73
TRAF4-203ENST00000394925 GAS2L3Q86XJ1 694 aa19.61■□□□□ 0.73
TRAF4-203ENST00000394925 CNTN4Q8IWV2 1026 aa19.61■□□□□ 0.73
TRAF4-203ENST00000394925 PPIL6Q8IXY8 311 aa19.61■□□□□ 0.73
TRAF4-203ENST00000394925 FAM47BQ8NA70 645 aa19.61■□□□□ 0.73
TRAF4-203ENST00000394925 GAL3ST3Q96A11 431 aa19.61■□□□□ 0.73
TRAF4-203ENST00000394925 TTYH2Q9BSA4 534 aa19.61■□□□□ 0.73
TRAF4-203ENST00000394925 ADAP2Q9NPF8 381 aa19.61■□□□□ 0.73
TRAF4-203ENST00000394925 DNAJB12Q9NXW2 375 aaKnown RBP19.61■□□□□ 0.73
TRAF4-203ENST00000394925 MYOTQ9UBF9 498 aa19.61■□□□□ 0.73
TRAF4-203ENST00000394925 VWA7Q9Y334 891 aa19.61■□□□□ 0.73
TRAF4-203ENST00000394925 GOLGA6L6A8MZA4 724 aa19.6■□□□□ 0.73
TRAF4-203ENST00000394925 BCKDKO14874 412 aa19.6■□□□□ 0.73
TRAF4-203ENST00000394925 TTC4O95801 387 aa19.6■□□□□ 0.73
TRAF4-203ENST00000394925 ZFP36L2P47974 494 aaKnown RBP19.6■□□□□ 0.73
TRAF4-203ENST00000394925 RAB38P57729 211 aa19.6■□□□□ 0.73
TRAF4-203ENST00000394925 CCZ1BP86790 482 aa19.6■□□□□ 0.73
TRAF4-203ENST00000394925 CCZ1P86791 482 aaPredicted RBP19.6■□□□□ 0.73
TRAF4-203ENST00000394925 ZNF750Q32MQ0 723 aa19.6■□□□□ 0.73
TRAF4-203ENST00000394925 SPANXN3Q5MJ09 141 aa19.6■□□□□ 0.73
TRAF4-203ENST00000394925 B3GNT6Q6ZMB0 384 aa19.6■□□□□ 0.73
TRAF4-203ENST00000394925 CLNKQ7Z7G1 428 aa19.6■□□□□ 0.73
TRAF4-203ENST00000394925 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.6■□□□□ 0.736e-8■■■■□ 22
TRAF4-203ENST00000394925 CCT6BQ92526 530 aa19.6■□□□□ 0.73
TRAF4-203ENST00000394925 RASL10BQ96S79 203 aa19.6■□□□□ 0.73
TRAF4-203ENST00000394925 NPLQ9BXD5 320 aaPredicted RBP19.6■□□□□ 0.73
TRAF4-203ENST00000394925 PPANQ9NQ55 473 aaKnown RBP19.6■□□□□ 0.73
TRAF4-203ENST00000394925 CCM2LQ9NUG4 571 aaPredicted RBP19.6■□□□□ 0.73
TRAF4-203ENST00000394925 MYOCOSA0A1B0GUC4 107 aa19.59■□□□□ 0.73
TRAF4-203ENST00000394925 OR14I1A6ND48 311 aa19.59■□□□□ 0.73
TRAF4-203ENST00000394925 FIGNL2A6NMB9 653 aa19.59■□□□□ 0.73
TRAF4-203ENST00000394925 ERI3O43414 337 aaKnown RBP19.59■□□□□ 0.73
TRAF4-203ENST00000394925 NRDCO43847 1150 aa19.59■□□□□ 0.73
TRAF4-203ENST00000394925 IFNA16P05015 189 aa19.59■□□□□ 0.73
TRAF4-203ENST00000394925 GLI4P10075 376 aa19.59■□□□□ 0.73
TRAF4-203ENST00000394925 HNRNPH1P31943 449 aaKnown RBP19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms