RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 H1F0P07305 194 aaKnown RBP15.48■□□□□ 0.07
PCDH1-203ENST00000394536 TAS2R41P59536 307 aa15.48■□□□□ 0.07
PCDH1-203ENST00000394536 MLLT1Q03111 559 aaPredicted RBP15.48■□□□□ 0.07
PCDH1-203ENST00000394536 SPHARQ15513 63 aa15.48■□□□□ 0.07
PCDH1-203ENST00000394536 ZNF181Q2M3W8 571 aa15.48■□□□□ 0.07
PCDH1-203ENST00000394536 TPGS2Q68CL5 300 aa15.48■□□□□ 0.07
PCDH1-203ENST00000394536 TMIGD1Q6UXZ0 262 aa15.48■□□□□ 0.07
PCDH1-203ENST00000394536 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.48■□□□□ 0.07
PCDH1-203ENST00000394536 KRT74Q7RTS7 529 aa15.48■□□□□ 0.07
PCDH1-203ENST00000394536 RD3Q7Z3Z2 195 aa15.48■□□□□ 0.07
PCDH1-203ENST00000394536 METTL4Q8N3J2 472 aa15.48■□□□□ 0.07
PCDH1-203ENST00000394536 TEX47Q8TBZ9 253 aa15.48■□□□□ 0.07
PCDH1-203ENST00000394536 TP63Q9H3D4 680 aaPredicted RBP15.48■□□□□ 0.07
PCDH1-203ENST00000394536 IMP3Q9NV31 184 aaKnown RBP15.48■□□□□ 0.07
PCDH1-203ENST00000394536 KLHL28Q9NXS3 571 aa15.48■□□□□ 0.07
PCDH1-203ENST00000394536 ITM2BQ9Y287 266 aa15.48■□□□□ 0.07
PCDH1-203ENST00000394536 DNAH12Q6ZR08 3092 aa15.48■□□□□ 0.07
PCDH1-203ENST00000394536 ANK1P16157 1881 aa15.48■□□□□ 0.07
PCDH1-203ENST00000394536 ISPDA4D126 451 aa15.48■□□□□ 0.07
PCDH1-203ENST00000394536 SLC35F4A4IF30 521 aa15.48■□□□□ 0.07
PCDH1-203ENST00000394536 HAT1O14929 419 aa15.48■□□□□ 0.07
PCDH1-203ENST00000394536 TPD52L2O43399 206 aaKnown RBP15.48■□□□□ 0.07
PCDH1-203ENST00000394536 PSKH1P11801 424 aa15.48■□□□□ 0.07
PCDH1-203ENST00000394536 HLA-EP13747 358 aa15.48■□□□□ 0.07
PCDH1-203ENST00000394536 CRISP1P54107 249 aa15.48■□□□□ 0.07
PCDH1-203ENST00000394536 TBPL1P62380 186 aa15.48■□□□□ 0.07
PCDH1-203ENST00000394536 HEPACAMQ14CZ8 416 aa15.48■□□□□ 0.07
PCDH1-203ENST00000394536 TBRG1Q3YBR2 411 aa15.48■□□□□ 0.07
PCDH1-203ENST00000394536 KLHL12Q53G59 568 aa15.48■□□□□ 0.07
PCDH1-203ENST00000394536 CYP4Z2PQ8N1L4 340 aa15.48■□□□□ 0.07
PCDH1-203ENST00000394536 CELF2-AS1Q8N7Q2 184 aa15.48■□□□□ 0.07
PCDH1-203ENST00000394536 PJA1Q8NG27 643 aa15.48■□□□□ 0.07
PCDH1-203ENST00000394536 C9orf43Q8TAL5 461 aaPredicted RBP15.48■□□□□ 0.07
PCDH1-203ENST00000394536 PIP5K1AQ99755 562 aa15.48■□□□□ 0.07
PCDH1-203ENST00000394536 CPNE5Q9HCH3 593 aa15.48■□□□□ 0.07
PCDH1-203ENST00000394536 ANKMY1Q9P2S6 941 aa15.48■□□□□ 0.07
PCDH1-203ENST00000394536 BOLA1Q9Y3E2 137 aa15.48■□□□□ 0.07
PCDH1-203ENST00000394536 WNT6Q9Y6F9 365 aa15.48■□□□□ 0.07
PCDH1-203ENST00000394536 GSAPA4D1B5 854 aa15.47■□□□□ 0.07
PCDH1-203ENST00000394536 LEFTY2O00292 366 aa15.47■□□□□ 0.07
PCDH1-203ENST00000394536 DYRK3O43781 588 aa15.47■□□□□ 0.07
PCDH1-203ENST00000394536 SLITRK5O94991 958 aa15.47■□□□□ 0.07
PCDH1-203ENST00000394536 CD72P21854 359 aa15.47■□□□□ 0.07
PCDH1-203ENST00000394536 SF3B4Q15427 424 aaKnown RBP eCLIP15.47■□□□□ 0.07
PCDH1-203ENST00000394536 SLC5A12Q1EHB4 618 aa15.47■□□□□ 0.07
PCDH1-203ENST00000394536 LY6G5CQ5SRR4 150 aa15.47■□□□□ 0.07
PCDH1-203ENST00000394536 CHCHD4Q8N4Q1 142 aa15.47■□□□□ 0.07
PCDH1-203ENST00000394536 FAM46DQ8NEK8 389 aa15.47■□□□□ 0.07
PCDH1-203ENST00000394536 SP140LQ9H930 580 aa15.47■□□□□ 0.07
PCDH1-203ENST00000394536 PCDH10Q9P2E7 1040 aa15.47■□□□□ 0.07
PCDH1-203ENST00000394536 TAC3Q9UHF0 121 aa15.47■□□□□ 0.07
PCDH1-203ENST00000394536 RLFQ13129 1914 aa15.47■□□□□ 0.07
PCDH1-203ENST00000394536 MGAMO43451 1857 aa15.47■□□□□ 0.07
PCDH1-203ENST00000394536 MPZL2O60487 215 aa15.47■□□□□ 0.07
PCDH1-203ENST00000394536 POP7O75817 140 aaKnown RBP15.47■□□□□ 0.07
PCDH1-203ENST00000394536 CDK1P06493 297 aa15.47■□□□□ 0.07
PCDH1-203ENST00000394536 PTX3P26022 381 aaPredicted RBP15.47■□□□□ 0.07
PCDH1-203ENST00000394536 SSTR4P31391 388 aa15.47■□□□□ 0.07
PCDH1-203ENST00000394536 ZFP36L2P47974 494 aaKnown RBP15.47■□□□□ 0.07
PCDH1-203ENST00000394536 PTSQ03393 145 aa15.47■□□□□ 0.07
PCDH1-203ENST00000394536 HNRNPA0Q13151 305 aaKnown RBP15.47■□□□□ 0.07
PCDH1-203ENST00000394536 ARHGEF6Q15052 776 aa15.47■□□□□ 0.07
PCDH1-203ENST00000394536 C22orf42Q6IC83 251 aa15.47■□□□□ 0.07
PCDH1-203ENST00000394536 KIAA1161Q6NSJ0 714 aa15.47■□□□□ 0.07
PCDH1-203ENST00000394536 TUBA3EQ6PEY2 450 aa15.47■□□□□ 0.07
PCDH1-203ENST00000394536 ZNF852Q6ZMS4 543 aa15.47■□□□□ 0.07
PCDH1-203ENST00000394536 GALNT12Q8IXK2 581 aa15.47■□□□□ 0.07
PCDH1-203ENST00000394536 DYNC2LI1Q8TCX1 351 aa15.47■□□□□ 0.07
PCDH1-203ENST00000394536 EFCAB11Q9BUY7 163 aa15.47■□□□□ 0.07
PCDH1-203ENST00000394536 TRMT61BQ9BVS5 477 aaKnown RBP15.47■□□□□ 0.07
PCDH1-203ENST00000394536 TRPV5Q9NQA5 729 aa15.47■□□□□ 0.07
PCDH1-203ENST00000394536 INIPQ9NRY2 104 aa15.47■□□□□ 0.07
PCDH1-203ENST00000394536 SIRT5Q9NXA8 310 aa15.47■□□□□ 0.07
PCDH1-203ENST00000394536 RPL36Q9Y3U8 105 aaKnown RBP15.47■□□□□ 0.07
PCDH1-203ENST00000394536 H3BNC9 293 aa15.47■□□□□ 0.07
PCDH1-203ENST00000394536 WWP2O00308 870 aa15.47■□□□□ 0.07
PCDH1-203ENST00000394536 PDE9AO76083 593 aa15.47■□□□□ 0.07
PCDH1-203ENST00000394536 TYRP14679 529 aa15.47■□□□□ 0.07
PCDH1-203ENST00000394536 SMIM11AP58511 58 aa15.47■□□□□ 0.07
PCDH1-203ENST00000394536 IRF5Q13568 498 aa15.47■□□□□ 0.07
PCDH1-203ENST00000394536 VEZF1Q14119 521 aa15.47■□□□□ 0.07
PCDH1-203ENST00000394536 NDUFA5Q16718 116 aa15.47■□□□□ 0.07
PCDH1-203ENST00000394536 REEP3Q6NUK4 255 aa15.47■□□□□ 0.07
PCDH1-203ENST00000394536 ZNF783Q6ZMS7 281 aa15.47■□□□□ 0.07
PCDH1-203ENST00000394536 HSD11B1LQ7Z5J1 315 aa15.47■□□□□ 0.07
PCDH1-203ENST00000394536 DNAJC22Q8N4W6 341 aa15.47■□□□□ 0.07
PCDH1-203ENST00000394536 TMEM98Q9Y2Y6 226 aa15.47■□□□□ 0.07
PCDH1-203ENST00000394536 TBC1D3BA6NDS4 549 aa15.46■□□□□ 0.07
PCDH1-203ENST00000394536 OR6C70A6NIJ9 312 aa15.46■□□□□ 0.07
PCDH1-203ENST00000394536 TRIM64CA6NLI5 447 aa15.46■□□□□ 0.07
PCDH1-203ENST00000394536 SLC30A4O14863 429 aa15.46■□□□□ 0.07
PCDH1-203ENST00000394536 WASP42768 502 aa15.46■□□□□ 0.07
PCDH1-203ENST00000394536 NKX3-2P78367 333 aa15.46■□□□□ 0.07
PCDH1-203ENST00000394536 MICAQ29983 383 aa15.46■□□□□ 0.07
PCDH1-203ENST00000394536 ZNF630Q2M218 657 aaPredicted RBP15.46■□□□□ 0.07
PCDH1-203ENST00000394536 SMU1Q2TAY7 513 aa15.46■□□□□ 0.07
PCDH1-203ENST00000394536 AGAP7PQ5VUJ5 663 aa15.46■□□□□ 0.07
PCDH1-203ENST00000394536 ZNF730Q6ZMV8 503 aa15.46■□□□□ 0.07
PCDH1-203ENST00000394536 SLC38A2Q96QD8 506 aa15.46■□□□□ 0.07
PCDH1-203ENST00000394536 MAPKAP1Q9BPZ7 522 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms