RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 LRG1P02750 347 aa18.03■□□□□ 0.48
CBX1-202ENST00000393408 HSMCR30P0CW71 290 aa18.03■□□□□ 0.48
CBX1-202ENST00000393408 NPPBP16860 134 aa18.03■□□□□ 0.48
CBX1-202ENST00000393408 PBLDP30039 288 aaPredicted RBP18.03■□□□□ 0.48
CBX1-202ENST00000393408 TMEM115Q12893 351 aaPredicted RBP18.03■□□□□ 0.48
CBX1-202ENST00000393408 FAM71E1Q6IPT2 247 aa18.03■□□□□ 0.48
CBX1-202ENST00000393408 TMEM220Q6QAJ8 160 aa18.03■□□□□ 0.48
CBX1-202ENST00000393408 C19orf48Q6RUI8 117 aa18.03■□□□□ 0.48
CBX1-202ENST00000393408 EFHD2Q96C19 240 aaPredicted RBP18.03■□□□□ 0.48
CBX1-202ENST00000393408 MAPKAP1Q9BPZ7 522 aa18.03■□□□□ 0.48
CBX1-202ENST00000393408 MYNNQ9NPC7 610 aa18.03■□□□□ 0.48
CBX1-202ENST00000393408 TAS2R9Q9NYW1 312 aa18.03■□□□□ 0.48
CBX1-202ENST00000393408 PEX16Q9Y5Y5 336 aa18.03■□□□□ 0.48
CBX1-202ENST00000393408 EFCAB10A6NFE3 127 aa18.02■□□□□ 0.48
CBX1-202ENST00000393408 GADD45GO95257 159 aa18.02■□□□□ 0.48
CBX1-202ENST00000393408 RECKO95980 971 aa18.02■□□□□ 0.48
CBX1-202ENST00000393408 TGFB1P01137 390 aa18.02■□□□□ 0.48
CBX1-202ENST00000393408 IFNA14P01570 189 aa18.02■□□□□ 0.48
CBX1-202ENST00000393408 ARAFP10398 606 aa18.02■□□□□ 0.48
CBX1-202ENST00000393408 CHI3L1P36222 383 aaPredicted RBP18.02■□□□□ 0.48
CBX1-202ENST00000393408 RPL3P39023 403 aaKnown RBP18.02■□□□□ 0.48
CBX1-202ENST00000393408 CDC42P60953 191 aa18.02■□□□□ 0.48
CBX1-202ENST00000393408 BCL2A1Q16548 175 aa18.02■□□□□ 0.48
CBX1-202ENST00000393408 SYTL1Q8IYJ3 562 aa18.02■□□□□ 0.48
CBX1-202ENST00000393408 ZNF689Q96CS4 500 aaPredicted RBP18.02■□□□□ 0.48
CBX1-202ENST00000393408 OR5M11Q96RB7 305 aa18.02■□□□□ 0.48
CBX1-202ENST00000393408 WRAP53Q9BUR4 548 aaKnown RBP18.02■□□□□ 0.48
CBX1-202ENST00000393408 EFCAB11Q9BUY7 163 aa18.02■□□□□ 0.48
CBX1-202ENST00000393408 OR51B5Q9H339 312 aa18.02■□□□□ 0.48
CBX1-202ENST00000393408 CNOT2Q9NZN8 540 aaKnown RBP18.02■□□□□ 0.48
CBX1-202ENST00000393408 PIPSLA2A3N6 862 aa18.02■□□□□ 0.47
CBX1-202ENST00000393408 SH3D21A4FU49 640 aa18.02■□□□□ 0.47
CBX1-202ENST00000393408 ZAR1LA6NP61 321 aa18.02■□□□□ 0.47
CBX1-202ENST00000393408 LILRB3O75022 631 aa18.02■□□□□ 0.47
CBX1-202ENST00000393408 C1GALT1C1LP0DN25 315 aa18.02■□□□□ 0.47
CBX1-202ENST00000393408 ETV6P41212 452 aa18.02■□□□□ 0.47
CBX1-202ENST00000393408 GANABQ14697 944 aaKnown RBP18.02■□□□□ 0.47
CBX1-202ENST00000393408 ZNF658BQ4V348 819 aaPredicted RBP18.02■□□□□ 0.47
CBX1-202ENST00000393408 IER5LQ5T953 404 aa18.02■□□□□ 0.47
CBX1-202ENST00000393408 ATAD3BQ5T9A4 648 aa18.02■□□□□ 0.47
CBX1-202ENST00000393408 TMEM215Q68D42 235 aa18.02■□□□□ 0.47
CBX1-202ENST00000393408 TMEM53Q6P2H8 277 aa18.02■□□□□ 0.47
CBX1-202ENST00000393408 DPPA4Q7L190 304 aa18.02■□□□□ 0.47
CBX1-202ENST00000393408 CYP4Z2PQ8N1L4 340 aa18.02■□□□□ 0.47
CBX1-202ENST00000393408 METTL4Q8N3J2 472 aa18.02■□□□□ 0.47
CBX1-202ENST00000393408 AQP11Q8NBQ7 271 aa18.02■□□□□ 0.47
CBX1-202ENST00000393408 FBXO15Q8NCQ5 510 aaPredicted RBP18.02■□□□□ 0.47
CBX1-202ENST00000393408 GPBP1L1Q9HC44 474 aaPredicted RBP18.02■□□□□ 0.47
CBX1-202ENST00000393408 GULP1Q9UBP9 304 aa18.02■□□□□ 0.47
CBX1-202ENST00000393408 ENOPH1Q9UHY7 261 aa18.02■□□□□ 0.47
CBX1-202ENST00000393408 MN1Q10571 1320 aaPredicted RBP18.02■□□□□ 0.47
CBX1-202ENST00000393408 TRBC2A0A5B9 178 aa18.01■□□□□ 0.47
CBX1-202ENST00000393408 H3BM21 787 aa18.01■□□□□ 0.47
CBX1-202ENST00000393408 SNPHO15079 494 aa18.01■□□□□ 0.47
CBX1-202ENST00000393408 ZW10O43264 779 aa18.01■□□□□ 0.47
CBX1-202ENST00000393408 MED26O95402 600 aa18.01■□□□□ 0.47
CBX1-202ENST00000393408 CTSLP07711 333 aa18.01■□□□□ 0.47
CBX1-202ENST00000393408 POLR2EP19388 210 aaKnown RBP18.01■□□□□ 0.47
CBX1-202ENST00000393408 TAS2R50P59544 299 aa18.01■□□□□ 0.47
CBX1-202ENST00000393408 KLHL17Q6TDP4 642 aa18.01■□□□□ 0.47
CBX1-202ENST00000393408 ATCAYQ86WG3 371 aa18.01■□□□□ 0.47
CBX1-202ENST00000393408 HEATR4Q86WZ0 1026 aa18.01■□□□□ 0.47
CBX1-202ENST00000393408 NLGN4XQ8N0W4 816 aa18.01■□□□□ 0.47
CBX1-202ENST00000393408 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.01■□□□□ 0.47
CBX1-202ENST00000393408 RAB23Q9ULC3 237 aa18.01■□□□□ 0.47
CBX1-202ENST00000393408 ANGPT4Q9Y264 503 aa18.01■□□□□ 0.47
CBX1-202ENST00000393408 DYRK1BQ9Y463 629 aa18.01■□□□□ 0.47
CBX1-202ENST00000393408 ARRDC5A6NEK1 342 aa18.01■□□□□ 0.47
CBX1-202ENST00000393408 KIAA0513O60268 411 aa18.01■□□□□ 0.47
CBX1-202ENST00000393408 GASTP01350 101 aa18.01■□□□□ 0.47
CBX1-202ENST00000393408 ALOX12P18054 663 aa18.01■□□□□ 0.47
CBX1-202ENST00000393408 RHCEP18577 417 aa18.01■□□□□ 0.47
CBX1-202ENST00000393408 CHMP24386 653 aa18.01■□□□□ 0.47
CBX1-202ENST00000393408 AKAP14Q86UN6 197 aa18.01■□□□□ 0.47
CBX1-202ENST00000393408 LMNTD1Q8N9Z9 388 aa18.01■□□□□ 0.47
CBX1-202ENST00000393408 MGLLQ99685 303 aa18.01■□□□□ 0.47
CBX1-202ENST00000393408 SGPP1Q9BX95 441 aa18.01■□□□□ 0.47
CBX1-202ENST00000393408 RC3H2Q9HBD1 1191 aaKnown RBP18.01■□□□□ 0.47
CBX1-202ENST00000393408 ATP11BQ9Y2G3 1177 aa18.01■□□□□ 0.47
CBX1-202ENST00000393408 CAB39Q9Y376 341 aaPredicted RBP18.01■□□□□ 0.47
CBX1-202ENST00000393408 PCDHGB6Q9Y5F9 930 aa18.01■□□□□ 0.47
CBX1-202ENST00000393408 KRT75O95678 551 aa18■□□□□ 0.47
CBX1-202ENST00000393408 DNTTP04053 509 aa18■□□□□ 0.47
CBX1-202ENST00000393408 CRISP1P54107 249 aa18■□□□□ 0.47
CBX1-202ENST00000393408 TSTA3Q13630 321 aaPredicted RBP18■□□□□ 0.47
CBX1-202ENST00000393408 DOC2BQ14184 412 aa18■□□□□ 0.47
CBX1-202ENST00000393408 DMC1Q14565 340 aa18■□□□□ 0.47
CBX1-202ENST00000393408 CARTPTQ16568 116 aa18■□□□□ 0.47
CBX1-202ENST00000393408 TSTQ16762 297 aaKnown RBP18■□□□□ 0.47
CBX1-202ENST00000393408 DESI1Q6ICB0 168 aa18■□□□□ 0.47
CBX1-202ENST00000393408 ZNF770Q6IQ21 691 aaPredicted RBP18■□□□□ 0.47
CBX1-202ENST00000393408 AP2M1Q96CW1 435 aa18■□□□□ 0.47
CBX1-202ENST00000393408 MTERF3Q96E29 417 aa18■□□□□ 0.47
CBX1-202ENST00000393408 CORO1BQ9BR76 489 aa18■□□□□ 0.47
CBX1-202ENST00000393408 ROGDIQ9GZN7 287 aa18■□□□□ 0.47
CBX1-202ENST00000393408 MIR1-1HGQ9H1L0 117 aa18■□□□□ 0.47
CBX1-202ENST00000393408 SPNS1Q9H2V7 528 aa18■□□□□ 0.47
CBX1-202ENST00000393408 MTCL1Q9Y4B5 1905 aaKnown RBP18■□□□□ 0.47
CBX1-202ENST00000393408 A0A1W2PRB8 838 aa18■□□□□ 0.47
CBX1-202ENST00000393408 MPZL2O60487 215 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms