RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 B3GNT6Q6ZMB0 384 aa16.53■□□□□ 0.24
PDLIM4-202ENST00000379018 ANKRD53Q8N9V6 530 aa16.53■□□□□ 0.24
PDLIM4-202ENST00000379018 OR4K1Q8NGD4 311 aa16.53■□□□□ 0.24
PDLIM4-202ENST00000379018 OR56A3Q8NH54 315 aa16.53■□□□□ 0.24
PDLIM4-202ENST00000379018 CCT6BQ92526 530 aa16.53■□□□□ 0.24
PDLIM4-202ENST00000379018 SLCO2A1Q92959 643 aa16.53■□□□□ 0.24
PDLIM4-202ENST00000379018 TTYH2Q9BSA4 534 aa16.53■□□□□ 0.24
PDLIM4-202ENST00000379018 EXO5Q9H790 373 aa16.53■□□□□ 0.24
PDLIM4-202ENST00000379018 SLC24A3Q9HC58 644 aa16.53■□□□□ 0.24
PDLIM4-202ENST00000379018 PRTFDC1Q9NRG1 225 aa16.53■□□□□ 0.24
PDLIM4-202ENST00000379018 ST6GALNAC2Q9UJ37 374 aa16.53■□□□□ 0.24
PDLIM4-202ENST00000379018 ZKSCAN5Q9Y2L8 839 aa16.53■□□□□ 0.24
PDLIM4-202ENST00000379018 YARS2Q9Y2Z4 477 aaKnown RBP16.53■□□□□ 0.24
PDLIM4-202ENST00000379018 DYRK1BQ9Y463 629 aa16.53■□□□□ 0.24
PDLIM4-202ENST00000379018 L3MBTL1Q9Y468 752 aa16.53■□□□□ 0.24
PDLIM4-202ENST00000379018 ZNF469Q96JG9 3925 aaPredicted RBP16.52■□□□□ 0.24
PDLIM4-202ENST00000379018 A0A0G2JNJ9 132 aa16.52■□□□□ 0.24
PDLIM4-202ENST00000379018 ATP6AP2A0A1C7CYW4 349 aa16.52■□□□□ 0.24
PDLIM4-202ENST00000379018 MAGEB16A2A368 324 aa16.52■□□□□ 0.24
PDLIM4-202ENST00000379018 NRDCO43847 1150 aa16.52■□□□□ 0.24
PDLIM4-202ENST00000379018 ATP6AP2O75787 350 aa16.52■□□□□ 0.24
PDLIM4-202ENST00000379018 ZFAND5O76080 213 aa16.52■□□□□ 0.24
PDLIM4-202ENST00000379018 GLI4P10075 376 aa16.52■□□□□ 0.24
PDLIM4-202ENST00000379018 CXCR5P32302 372 aa16.52■□□□□ 0.24
PDLIM4-202ENST00000379018 MAGEA5P43359 124 aa16.52■□□□□ 0.24
PDLIM4-202ENST00000379018 REEP5Q00765 189 aa16.52■□□□□ 0.24
PDLIM4-202ENST00000379018 SLC13A2Q13183 592 aa16.52■□□□□ 0.24
PDLIM4-202ENST00000379018 XKR6Q5GH73 641 aa16.52■□□□□ 0.24
PDLIM4-202ENST00000379018 SLC22A16Q86VW1 577 aa16.52■□□□□ 0.24
PDLIM4-202ENST00000379018 LIX1LQ8IVB5 337 aa16.52■□□□□ 0.24
PDLIM4-202ENST00000379018 ARMC10Q8N2F6 343 aa16.52■□□□□ 0.24
PDLIM4-202ENST00000379018 AGGF1Q8N302 714 aaeCLIP16.52■□□□□ 0.24
PDLIM4-202ENST00000379018 FAM47BQ8NA70 645 aa16.52■□□□□ 0.24
PDLIM4-202ENST00000379018 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.52■□□□□ 0.24
PDLIM4-202ENST00000379018 CREB3L4Q8TEY5 395 aa16.52■□□□□ 0.24
PDLIM4-202ENST00000379018 RMND5BQ96G75 393 aaPredicted RBP16.52■□□□□ 0.24
PDLIM4-202ENST00000379018 FAR2Q96K12 515 aa16.52■□□□□ 0.24
PDLIM4-202ENST00000379018 AIF1LQ9BQI0 150 aa16.52■□□□□ 0.24
PDLIM4-202ENST00000379018 SARGQ9BW04 601 aa16.52■□□□□ 0.24
PDLIM4-202ENST00000379018 TRIM54Q9BYV2 358 aa16.52■□□□□ 0.24
PDLIM4-202ENST00000379018 LDAHQ9H6V9 325 aa16.52■□□□□ 0.24
PDLIM4-202ENST00000379018 XAB2Q9HCS7 855 aaKnown RBP16.52■□□□□ 0.24
PDLIM4-202ENST00000379018 ZNF358Q9NW07 568 aa16.52■□□□□ 0.24
PDLIM4-202ENST00000379018 Q9UFV3 132 aa16.52■□□□□ 0.24
PDLIM4-202ENST00000379018 ACAD8Q9UKU7 415 aa16.52■□□□□ 0.24
PDLIM4-202ENST00000379018 MMACHCQ9Y4U1 282 aa16.52■□□□□ 0.24
PDLIM4-202ENST00000379018 FAM215AQ9Y5M1 114 aa16.52■□□□□ 0.24
PDLIM4-202ENST00000379018 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.51■□□□□ 0.23
PDLIM4-202ENST00000379018 TGFBR3LH3BV60 316 aa16.51■□□□□ 0.23
PDLIM4-202ENST00000379018 IFNA16P05015 189 aa16.51■□□□□ 0.23
PDLIM4-202ENST00000379018 DNASE1P24855 282 aa16.51■□□□□ 0.23
PDLIM4-202ENST00000379018 AHRP35869 848 aa16.51■□□□□ 0.23
PDLIM4-202ENST00000379018 MAGEA6P43360 314 aa16.51■□□□□ 0.23
PDLIM4-202ENST00000379018 PDAP1Q13442 181 aaKnown RBP16.51■□□□□ 0.23
PDLIM4-202ENST00000379018 BMPR2Q13873 1038 aa16.51■□□□□ 0.23
PDLIM4-202ENST00000379018 ARMC3Q5W041 872 aa16.51■□□□□ 0.23
PDLIM4-202ENST00000379018 ARSKQ6UWY0 536 aa16.51■□□□□ 0.23
PDLIM4-202ENST00000379018 STRA8Q7Z7C7 330 aa16.51■□□□□ 0.23
PDLIM4-202ENST00000379018 LMNTD2Q8IXW0 634 aa16.51■□□□□ 0.23
PDLIM4-202ENST00000379018 GPATCH11Q8N954 259 aa16.51■□□□□ 0.23
PDLIM4-202ENST00000379018 MYRIPQ8NFW9 859 aa16.51■□□□□ 0.23
PDLIM4-202ENST00000379018 NINJ1Q92982 152 aa16.51■□□□□ 0.23
PDLIM4-202ENST00000379018 AICDAQ9GZX7 198 aa16.51■□□□□ 0.23
PDLIM4-202ENST00000379018 CXXC4Q9H2H0 198 aa16.51■□□□□ 0.23
PDLIM4-202ENST00000379018 CLEC4MQ9H2X3 399 aaPredicted RBP16.51■□□□□ 0.23
PDLIM4-202ENST00000379018 ZDHHC11Q9H8X9 412 aa16.51■□□□□ 0.23
PDLIM4-202ENST00000379018 SLC17A6Q9P2U8 582 aa16.51■□□□□ 0.23
PDLIM4-202ENST00000379018 FAM221AA4D161 298 aa16.5■□□□□ 0.23
PDLIM4-202ENST00000379018 BCKDKO14874 412 aa16.5■□□□□ 0.23
PDLIM4-202ENST00000379018 CTAG2O75638 210 aa16.5■□□□□ 0.23
PDLIM4-202ENST00000379018 CELA3AP09093 270 aa16.5■□□□□ 0.23
PDLIM4-202ENST00000379018 MLNP12872 115 aa16.5■□□□□ 0.23
PDLIM4-202ENST00000379018 UQCRC1P31930 480 aa16.5■□□□□ 0.23
PDLIM4-202ENST00000379018 ADH7P40394 386 aa16.5■□□□□ 0.23
PDLIM4-202ENST00000379018 DNASE1L1P49184 302 aa16.5■□□□□ 0.23
PDLIM4-202ENST00000379018 HNRNPFP52597 415 aaKnown RBP16.5■□□□□ 0.23
PDLIM4-202ENST00000379018 DGKQP52824 942 aa16.5■□□□□ 0.23
PDLIM4-202ENST00000379018 IL2P60568 153 aa16.5■□□□□ 0.23
PDLIM4-202ENST00000379018 CCZ1BP86790 482 aa16.5■□□□□ 0.23
PDLIM4-202ENST00000379018 CCZ1P86791 482 aaPredicted RBP16.5■□□□□ 0.23
PDLIM4-202ENST00000379018 RTL6Q6ICC9 239 aa16.5■□□□□ 0.23
PDLIM4-202ENST00000379018 GK5Q6ZS86 529 aa16.5■□□□□ 0.23
PDLIM4-202ENST00000379018 KIAA0408Q6ZU52 694 aa16.5■□□□□ 0.23
PDLIM4-202ENST00000379018 FAM47EQ6ZV65 393 aa16.5■□□□□ 0.23
PDLIM4-202ENST00000379018 Q71RC1 249 aaPredicted RBP16.5■□□□□ 0.23
PDLIM4-202ENST00000379018 SCUBE1Q8IWY4 988 aa16.5■□□□□ 0.23
PDLIM4-202ENST00000379018 TMEM251Q8N6I4 163 aa16.5■□□□□ 0.23
PDLIM4-202ENST00000379018 C2CD4AQ8NCU7 369 aaPredicted RBP16.5■□□□□ 0.23
PDLIM4-202ENST00000379018 TMEM52Q8NDY8 209 aa16.5■□□□□ 0.23
PDLIM4-202ENST00000379018 TRPV3Q8NET8 790 aa16.5■□□□□ 0.23
PDLIM4-202ENST00000379018 ATL1Q8WXF7 558 aa16.5■□□□□ 0.23
PDLIM4-202ENST00000379018 FBXL8Q96CD0 374 aa16.5■□□□□ 0.23
PDLIM4-202ENST00000379018 RASL10BQ96S79 203 aa16.5■□□□□ 0.23
PDLIM4-202ENST00000379018 CNPPD1Q9BV87 410 aa16.5■□□□□ 0.23
PDLIM4-202ENST00000379018 RBSNQ9H1K0 784 aa16.5■□□□□ 0.23
PDLIM4-202ENST00000379018 ABCA2Q9BZC7 2435 aa16.49■□□□□ 0.23
PDLIM4-202ENST00000379018 ERI3O43414 337 aaKnown RBP16.49■□□□□ 0.23
PDLIM4-202ENST00000379018 KIR2DL3P43628 341 aa16.49■□□□□ 0.23
PDLIM4-202ENST00000379018 MAN2A2P49641 1150 aa16.49■□□□□ 0.23
PDLIM4-202ENST00000379018 AP1S2P56377 157 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms