RNA–Protein interactions for RNA: ENST00000377612.8

COMMD6-202, Transcript of COMM domain containing 6, humanhuman

TSL 5

Gene COMMD6, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-202ENST00000377612 UBTD2Q8WUN7 234 aa16.7■□□□□ 0.26
COMMD6-202ENST00000377612 FRMD6Q96NE9 622 aa16.7■□□□□ 0.26
COMMD6-202ENST00000377612 UTP23Q9BRU9 249 aaKnown RBP16.7■□□□□ 0.26
COMMD6-202ENST00000377612 LRRC1Q9BTT6 524 aa16.7■□□□□ 0.26
COMMD6-202ENST00000377612 TSPAN10Q9H1Z9 355 aaPredicted RBP16.7■□□□□ 0.26
COMMD6-202ENST00000377612 CNOT10Q9H9A5 744 aaKnown RBP16.7■□□□□ 0.26
COMMD6-202ENST00000377612 NUDT4Q9NZJ9 180 aa16.7■□□□□ 0.26
COMMD6-202ENST00000377612 MMACHCQ9Y4U1 282 aa16.7■□□□□ 0.26
COMMD6-202ENST00000377612 PHF3Q92576 2039 aaKnown RBP16.7■□□□□ 0.26
COMMD6-202ENST00000377612 ASPDHA6ND91 283 aa16.69■□□□□ 0.26
COMMD6-202ENST00000377612 PSMD12O00232 456 aaPredicted RBP16.69■□□□□ 0.26
COMMD6-202ENST00000377612 CLGNO14967 610 aa16.69■□□□□ 0.26
COMMD6-202ENST00000377612 CCNT2O60583 730 aaKnown RBP16.69■□□□□ 0.26
COMMD6-202ENST00000377612 KERAO60938 352 aa16.69■□□□□ 0.26
COMMD6-202ENST00000377612 MTHFD2P13995 350 aa16.69■□□□□ 0.26
COMMD6-202ENST00000377612 GSTM2P28161 218 aa16.69■□□□□ 0.26
COMMD6-202ENST00000377612 PLA2G16P53816 162 aa16.69■□□□□ 0.26
COMMD6-202ENST00000377612 NAB1Q13506 487 aa16.69■□□□□ 0.26
COMMD6-202ENST00000377612 ABHD17CQ6PCB6 329 aa16.69■□□□□ 0.26
COMMD6-202ENST00000377612 KRT78Q8N1N4 520 aa16.69■□□□□ 0.26
COMMD6-202ENST00000377612 RNF175Q8N4F7 328 aa16.69■□□□□ 0.26
COMMD6-202ENST00000377612 OR2L5Q8NG80 312 aa16.69■□□□□ 0.26
COMMD6-202ENST00000377612 SUN3Q8TAQ9 357 aa16.69■□□□□ 0.26
COMMD6-202ENST00000377612 KCTD4Q8WVF5 259 aa16.69■□□□□ 0.26
COMMD6-202ENST00000377612 PTCD3Q96EY7 689 aaKnown RBP16.69■□□□□ 0.26
COMMD6-202ENST00000377612 C16orf45Q96MC5 204 aaPredicted RBP16.69■□□□□ 0.26
COMMD6-202ENST00000377612 F2RL3Q96RI0 385 aa16.69■□□□□ 0.26
COMMD6-202ENST00000377612 NPLQ9BXD5 320 aaPredicted RBP16.69■□□□□ 0.26
COMMD6-202ENST00000377612 CD244Q9BZW8 370 aa16.69■□□□□ 0.26
COMMD6-202ENST00000377612 REXO4Q9GZR2 422 aaKnown RBP16.69■□□□□ 0.26
COMMD6-202ENST00000377612 PCDHGB6Q9Y5F9 930 aa16.69■□□□□ 0.26
COMMD6-202ENST00000377612 CSMD1Q96PZ7 3565 aa16.69■□□□□ 0.26
COMMD6-202ENST00000377612 SUPT3HB4E1H0 165 aa16.68■□□□□ 0.26
COMMD6-202ENST00000377612 CYR61O00622 381 aa16.68■□□□□ 0.26
COMMD6-202ENST00000377612 PRKNO60260 465 aaPredicted RBP16.68■□□□□ 0.26
COMMD6-202ENST00000377612 H2AFYO75367 372 aaKnown RBP16.68■□□□□ 0.26
COMMD6-202ENST00000377612 SUPT3HO75486 399 aa16.68■□□□□ 0.26
COMMD6-202ENST00000377612 MYO1DO94832 1006 aa16.68■□□□□ 0.26
COMMD6-202ENST00000377612 CRYABP02511 175 aaKnown RBP16.68■□□□□ 0.26
COMMD6-202ENST00000377612 LIM2P55344 173 aa16.68■□□□□ 0.26
COMMD6-202ENST00000377612 MLF1P58340 268 aa16.68■□□□□ 0.26
COMMD6-202ENST00000377612 TAS2R50P59544 299 aa16.68■□□□□ 0.26
COMMD6-202ENST00000377612 CHIT1Q13231 466 aa16.68■□□□□ 0.26
COMMD6-202ENST00000377612 ZRSR2Q15696 482 aaKnown RBP16.68■□□□□ 0.26
COMMD6-202ENST00000377612 C8orf74Q6P047 294 aa16.68■□□□□ 0.26
COMMD6-202ENST00000377612 RAPH1Q70E73 1250 aa16.68■□□□□ 0.26
COMMD6-202ENST00000377612 GALNTL5Q7Z4T8 443 aa16.68■□□□□ 0.26
COMMD6-202ENST00000377612 CLNKQ7Z7G1 428 aa16.68■□□□□ 0.26
COMMD6-202ENST00000377612 RPS19BP1Q86WX3 136 aaKnown RBP16.68■□□□□ 0.26
COMMD6-202ENST00000377612 ARMC10Q8N2F6 343 aa16.68■□□□□ 0.26
COMMD6-202ENST00000377612 DNAJB8Q8NHS0 232 aa16.68■□□□□ 0.26
COMMD6-202ENST00000377612 NXNL1Q96CM4 212 aa16.68■□□□□ 0.26
COMMD6-202ENST00000377612 SEC16BQ96JE7 1060 aa16.68■□□□□ 0.26
COMMD6-202ENST00000377612 EFCAB11Q9BUY7 163 aa16.68■□□□□ 0.26
COMMD6-202ENST00000377612 MS4A8Q9BY19 250 aa16.68■□□□□ 0.26
COMMD6-202ENST00000377612 PITHD1Q9GZP4 211 aaPredicted RBP16.68■□□□□ 0.26
COMMD6-202ENST00000377612 PRDM7Q9NQW5 492 aa16.68■□□□□ 0.26
COMMD6-202ENST00000377612 PRTFDC1Q9NRG1 225 aa16.68■□□□□ 0.26
COMMD6-202ENST00000377612 NINJ2Q9NZG7 142 aa16.68■□□□□ 0.26
COMMD6-202ENST00000377612 SEC14L3Q9UDX4 400 aa16.68■□□□□ 0.26
COMMD6-202ENST00000377612 DAPP1Q9UN19 280 aa16.68■□□□□ 0.26
COMMD6-202ENST00000377612 PKDREJQ9NTG1 2253 aa16.67■□□□□ 0.26
COMMD6-202ENST00000377612 TRBV11-1A0A0K0K1C0 115 aa16.67■□□□□ 0.26
COMMD6-202ENST00000377612 ANKDD1BA6NHY2 528 aa16.67■□□□□ 0.26
COMMD6-202ENST00000377612 LRRC14BA6NHZ5 514 aa16.67■□□□□ 0.26
COMMD6-202ENST00000377612 RTCAO00442 366 aaKnown RBP16.67■□□□□ 0.26
COMMD6-202ENST00000377612 B3GALT2O43825 422 aa16.67■□□□□ 0.26
COMMD6-202ENST00000377612 LTA4HP09960 611 aaKnown RBP16.67■□□□□ 0.26
COMMD6-202ENST00000377612 GPR143P51810 404 aa16.67■□□□□ 0.26
COMMD6-202ENST00000377612 OC90Q02509 493 aaPredicted RBP16.67■□□□□ 0.26
COMMD6-202ENST00000377612 IRF8Q02556 426 aa16.67■□□□□ 0.26
COMMD6-202ENST00000377612 CKAP4Q07065 602 aaKnown RBP16.67■□□□□ 0.26
COMMD6-202ENST00000377612 TBCCQ15814 346 aa16.67■□□□□ 0.26
COMMD6-202ENST00000377612 RNFT1Q5M7Z0 435 aa16.67■□□□□ 0.26
COMMD6-202ENST00000377612 TRIM40Q6P9F5 258 aa16.67■□□□□ 0.26
COMMD6-202ENST00000377612 SIAH3Q8IW03 269 aa16.67■□□□□ 0.26
COMMD6-202ENST00000377612 B3GNT7Q8NFL0 401 aa16.67■□□□□ 0.26
COMMD6-202ENST00000377612 STAG3L4Q8TBR4 150 aa16.67■□□□□ 0.26
COMMD6-202ENST00000377612 ZNF473Q8WTR7 871 aaKnown RBP16.67■□□□□ 0.26
COMMD6-202ENST00000377612 RELTQ969Z4 430 aa16.67■□□□□ 0.26
COMMD6-202ENST00000377612 MRRFQ96E11 262 aaKnown RBP16.67■□□□□ 0.26
COMMD6-202ENST00000377612 FAR2Q96K12 515 aa16.67■□□□□ 0.26
COMMD6-202ENST00000377612 SERINC2Q96SA4 455 aa16.67■□□□□ 0.26
COMMD6-202ENST00000377612 CAPS2Q9BXY5 557 aa16.67■□□□□ 0.26
COMMD6-202ENST00000377612 SNX15Q9NRS6 342 aa16.67■□□□□ 0.26
COMMD6-202ENST00000377612 LRFN1Q9P244 771 aa16.67■□□□□ 0.26
COMMD6-202ENST00000377612 PPIEQ9UNP9 301 aaKnown RBP16.67■□□□□ 0.26
COMMD6-202ENST00000377612 ARHGAP21Q5T5U3 1957 aa16.67■□□□□ 0.26
COMMD6-202ENST00000377612 HCFC1P51610 2035 aa16.67■□□□□ 0.26
COMMD6-202ENST00000377612 MYOCOSA0A1B0GUC4 107 aa16.66■□□□□ 0.26
COMMD6-202ENST00000377612 ZNHIT1O43257 154 aa16.66■□□□□ 0.26
COMMD6-202ENST00000377612 NME2P1O60361 137 aa16.66■□□□□ 0.26
COMMD6-202ENST00000377612 SH3BGRLO75368 114 aa16.66■□□□□ 0.26
COMMD6-202ENST00000377612 S100BP04271 92 aaPredicted RBP16.66■□□□□ 0.26
COMMD6-202ENST00000377612 SP1P08047 785 aa16.66■□□□□ 0.26
COMMD6-202ENST00000377612 NME2P22392 152 aa16.66■□□□□ 0.26
COMMD6-202ENST00000377612 CASP2P42575 452 aa16.66■□□□□ 0.26
COMMD6-202ENST00000377612 MSH2P43246 934 aa16.66■□□□□ 0.26
COMMD6-202ENST00000377612 MTTPP55157 894 aa16.66■□□□□ 0.26
COMMD6-202ENST00000377612 MROH9Q5TGP6 573 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms