RNA–Protein interactions for RNA: ENST00000376646.3

VPS13A-206, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5 BASIC

Gene VPS13A, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-206ENST00000376646 SLC34A1Q06495 639 aa1.79□□□□□ -2.12
VPS13A-206ENST00000376646 CD300CQ08708 224 aa1.79□□□□□ -2.12
VPS13A-206ENST00000376646 RIGQ13278 110 aa1.79□□□□□ -2.12
VPS13A-206ENST00000376646 PEX6Q13608 980 aa1.79□□□□□ -2.12
VPS13A-206ENST00000376646 LY6DQ14210 128 aa1.79□□□□□ -2.12
VPS13A-206ENST00000376646 TMEM132DQ14C87 1099 aa1.79□□□□□ -2.12
VPS13A-206ENST00000376646 FASTKD3Q14CZ7 662 aaKnown RBP1.79□□□□□ -2.12
VPS13A-206ENST00000376646 RPS6KA1Q15418 735 aa1.79□□□□□ -2.12
VPS13A-206ENST00000376646 ZNF74Q16587 644 aa1.79□□□□□ -2.12
VPS13A-206ENST00000376646 MOGAT2Q3SYC2 334 aa1.79□□□□□ -2.12
VPS13A-206ENST00000376646 FUT11Q495W5 492 aa1.79□□□□□ -2.12
VPS13A-206ENST00000376646 KCTD11Q693B1 232 aa1.79□□□□□ -2.12
VPS13A-206ENST00000376646 ASPGQ86U10 573 aa1.79□□□□□ -2.12
VPS13A-206ENST00000376646 ZC3H3Q8IXZ2 948 aaKnown RBP1.79□□□□□ -2.12
VPS13A-206ENST00000376646 CLEC1AQ8NC01 280 aa1.79□□□□□ -2.12
VPS13A-206ENST00000376646 OR6S1Q8NH40 331 aa1.79□□□□□ -2.12
VPS13A-206ENST00000376646 RNASE8Q8TDE3 154 aaKnown RBP1.79□□□□□ -2.12
VPS13A-206ENST00000376646 C5orf30Q96GV9 206 aa1.79□□□□□ -2.12
VPS13A-206ENST00000376646 ZNF577Q9BSK1 485 aa1.79□□□□□ -2.12
VPS13A-206ENST00000376646 TRIM6Q9C030 488 aaPredicted RBP1.79□□□□□ -2.12
VPS13A-206ENST00000376646 PILRBQ9UKJ0 227 aa1.79□□□□□ -2.12
VPS13A-206ENST00000376646 POMT2Q9UKY4 750 aa1.79□□□□□ -2.12
VPS13A-206ENST00000376646 SPATA31D1Q6ZQQ2 1576 aa1.79□□□□□ -2.12
VPS13A-206ENST00000376646 PFASO15067 1338 aa1.79□□□□□ -2.12
VPS13A-206ENST00000376646 GPR98Q8WXG9 6306 aa1.78□□□□□ -2.12
VPS13A-206ENST00000376646 A0A087X0K7 114 aa1.78□□□□□ -2.12
VPS13A-206ENST00000376646 A0A0U1RQG5 324 aaPredicted RBP1.78□□□□□ -2.12
VPS13A-206ENST00000376646 GLTPD2A6NH11 291 aa1.78□□□□□ -2.12
VPS13A-206ENST00000376646 MPTX1A8MV57 137 aa1.78□□□□□ -2.12
VPS13A-206ENST00000376646 A8MVM7 634 aa1.78□□□□□ -2.12
VPS13A-206ENST00000376646 CACNB4O00305 520 aaPredicted RBP1.78□□□□□ -2.12
VPS13A-206ENST00000376646 TEX28O15482 410 aa1.78□□□□□ -2.12
VPS13A-206ENST00000376646 SCO2O43819 266 aa1.78□□□□□ -2.12
VPS13A-206ENST00000376646 VEGFDO43915 354 aa1.78□□□□□ -2.12
VPS13A-206ENST00000376646 PNPP00491 289 aa1.78□□□□□ -2.12
VPS13A-206ENST00000376646 PRKAR1AP10644 381 aa1.78□□□□□ -2.12
VPS13A-206ENST00000376646 CPA3P15088 417 aa1.78□□□□□ -2.12
VPS13A-206ENST00000376646 ELAVL4P26378 380 aaKnown RBP1.78□□□□□ -2.12
VPS13A-206ENST00000376646 SOX3P41225 446 aa1.78□□□□□ -2.12
VPS13A-206ENST00000376646 UCP2P55851 309 aa1.78□□□□□ -2.12
VPS13A-206ENST00000376646 HUNKP57058 714 aa1.78□□□□□ -2.12
VPS13A-206ENST00000376646 DCDC1P59894 354 aa1.78□□□□□ -2.12
VPS13A-206ENST00000376646 CBX3Q13185 183 aa1.78□□□□□ -2.12
VPS13A-206ENST00000376646 CDH18Q13634 790 aa1.78□□□□□ -2.12
VPS13A-206ENST00000376646 CDC37Q16543 378 aaPredicted RBP1.78□□□□□ -2.12
VPS13A-206ENST00000376646 DUSP5Q16690 384 aa1.78□□□□□ -2.12
VPS13A-206ENST00000376646 ARMCX4Q5H9R4 360 aa1.78□□□□□ -2.12
VPS13A-206ENST00000376646 CES4AQ5XG92 561 aa1.78□□□□□ -2.12
VPS13A-206ENST00000376646 DHRS11Q6UWP2 260 aa1.78□□□□□ -2.12
VPS13A-206ENST00000376646 LEKR1Q6ZMV7 388 aa1.78□□□□□ -2.12
VPS13A-206ENST00000376646 FCRLAQ7L513 359 aa1.78□□□□□ -2.12
VPS13A-206ENST00000376646 COX8CQ7Z4L0 72 aa1.78□□□□□ -2.12
VPS13A-206ENST00000376646 ZNF584Q8IVC4 421 aa1.78□□□□□ -2.12
VPS13A-206ENST00000376646 CNTN4Q8IWV2 1026 aa1.78□□□□□ -2.12
VPS13A-206ENST00000376646 FAM89BQ8N5H3 189 aa1.78□□□□□ -2.12
VPS13A-206ENST00000376646 RASL10AQ92737 203 aa1.78□□□□□ -2.12
VPS13A-206ENST00000376646 ATP6V0A1Q93050 837 aa1.78□□□□□ -2.12
VPS13A-206ENST00000376646 EPSTI1Q96J88 318 aa1.78□□□□□ -2.12
VPS13A-206ENST00000376646 NKX3-1Q99801 234 aaPredicted RBP1.78□□□□□ -2.12
VPS13A-206ENST00000376646 NYXQ9GZU5 481 aa1.78□□□□□ -2.12
VPS13A-206ENST00000376646 THAP9Q9H5L6 903 aa1.78□□□□□ -2.12
VPS13A-206ENST00000376646 GPR173Q9NS66 373 aa1.78□□□□□ -2.12
VPS13A-206ENST00000376646 DNAJC11Q9NVH1 559 aa1.78□□□□□ -2.12
VPS13A-206ENST00000376646 TEX10Q9NXF1 929 aaPredicted RBP1.78□□□□□ -2.12
VPS13A-206ENST00000376646 GPR83Q9NYM4 423 aa1.78□□□□□ -2.12
VPS13A-206ENST00000376646 HACD3Q9P035 362 aa1.78□□□□□ -2.12
VPS13A-206ENST00000376646 FBXL4Q9UKA2 621 aa1.78□□□□□ -2.12
VPS13A-206ENST00000376646 RARRES3Q9UL19 164 aa1.78□□□□□ -2.12
VPS13A-206ENST00000376646 ZNF510Q9Y2H8 683 aa1.78□□□□□ -2.12
VPS13A-206ENST00000376646 KNSTRNQ9Y448 316 aa1.78□□□□□ -2.12
VPS13A-206ENST00000376646 CSNK1G3Q9Y6M4 447 aa1.78□□□□□ -2.12
VPS13A-206ENST00000376646 ATRXP46100 2492 aa1.78□□□□□ -2.12
VPS13A-206ENST00000376646 HCFC1P51610 2035 aa1.78□□□□□ -2.12
VPS13A-206ENST00000376646 ZNF732B4DXR9 585 aa1.78□□□□□ -2.13
VPS13A-206ENST00000376646 M0R296 226 aa1.78□□□□□ -2.13
VPS13A-206ENST00000376646 RTCAO00442 366 aaKnown RBP1.78□□□□□ -2.13
VPS13A-206ENST00000376646 CYTIPO60759 359 aa1.78□□□□□ -2.13
VPS13A-206ENST00000376646 SAP30O75446 220 aa1.78□□□□□ -2.13
VPS13A-206ENST00000376646 LETM1O95202 739 aaPredicted RBP1.78□□□□□ -2.13
VPS13A-206ENST00000376646 OLFM2O95897 454 aa1.78□□□□□ -2.13
VPS13A-206ENST00000376646 IGHEP01854 428 aa1.78□□□□□ -2.13
VPS13A-206ENST00000376646 THEGLP0DJG4 465 aa1.78□□□□□ -2.13
VPS13A-206ENST00000376646 OR3A3P47888 321 aa1.78□□□□□ -2.13
VPS13A-206ENST00000376646 OR3A2P47893 321 aa1.78□□□□□ -2.13
VPS13A-206ENST00000376646 XGP55808 180 aa1.78□□□□□ -2.13
VPS13A-206ENST00000376646 OR1D5P58170 312 aa1.78□□□□□ -2.13
VPS13A-206ENST00000376646 YBEYP58557 167 aaPredicted RBP1.78□□□□□ -2.13
VPS13A-206ENST00000376646 BTG1P62324 171 aa1.78□□□□□ -2.13
VPS13A-206ENST00000376646 RPP38P78345 283 aaKnown RBP1.78□□□□□ -2.13
VPS13A-206ENST00000376646 SGCGQ13326 291 aa1.78□□□□□ -2.13
VPS13A-206ENST00000376646 MAPK11Q15759 364 aa1.78□□□□□ -2.13
VPS13A-206ENST00000376646 ACKR1Q16570 336 aa1.78□□□□□ -2.13
VPS13A-206ENST00000376646 FGD3Q5JSP0 725 aa1.78□□□□□ -2.13
VPS13A-206ENST00000376646 SLC25A30Q5SVS4 291 aa1.78□□□□□ -2.13
VPS13A-206ENST00000376646 AGAP6Q5VW22 663 aa1.78□□□□□ -2.13
VPS13A-206ENST00000376646 KIF6Q6ZMV9 814 aa1.78□□□□□ -2.13
VPS13A-206ENST00000376646 C17orf107Q6ZR85 190 aa1.78□□□□□ -2.13
VPS13A-206ENST00000376646 PRSS42Q7Z5A4 293 aa1.78□□□□□ -2.13
VPS13A-206ENST00000376646 TMEM126BQ8IUX1 230 aa1.78□□□□□ -2.13
VPS13A-206ENST00000376646 SERPINA12Q8IW75 414 aa1.78□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms