RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 SPRP35270 261 aaPredicted RBP13.3□□□□□ -0.28
NELFE-201ENST00000375425 HLCSP50747 726 aa13.3□□□□□ -0.28
NELFE-201ENST00000375425 CLCN2P51788 898 aa13.3□□□□□ -0.28
NELFE-201ENST00000375425 HNRNPFP52597 415 aaKnown RBP13.3□□□□□ -0.28
NELFE-201ENST00000375425 CASP6P55212 293 aa13.3□□□□□ -0.28
NELFE-201ENST00000375425 HSD17B7P56937 341 aa13.3□□□□□ -0.28
NELFE-201ENST00000375425 RAB10P61026 200 aa13.3□□□□□ -0.28
NELFE-201ENST00000375425 DOC2AQ14183 400 aa13.3□□□□□ -0.28
NELFE-201ENST00000375425 TRADDQ15628 312 aa13.3□□□□□ -0.28
NELFE-201ENST00000375425 ZKSCAN8Q15776 578 aaPredicted RBP13.3□□□□□ -0.28
NELFE-201ENST00000375425 C3AR1Q16581 482 aa13.3□□□□□ -0.28
NELFE-201ENST00000375425 ADPRMQ3LIE5 342 aa13.3□□□□□ -0.28
NELFE-201ENST00000375425 ADNP2Q6IQ32 1131 aa13.3□□□□□ -0.28
NELFE-201ENST00000375425 MTFR2Q6P444 385 aa13.3□□□□□ -0.28
NELFE-201ENST00000375425 ZNF227Q86WZ6 799 aa13.3□□□□□ -0.28
NELFE-201ENST00000375425 SCUBE1Q8IWY4 988 aa13.3□□□□□ -0.28
NELFE-201ENST00000375425 PPM1NQ8N819 430 aa13.3□□□□□ -0.28
NELFE-201ENST00000375425 FAM98AQ8NCA5 519 aaKnown RBP13.3□□□□□ -0.28
NELFE-201ENST00000375425 TMEM52Q8NDY8 209 aa13.3□□□□□ -0.28
NELFE-201ENST00000375425 B3GNT7Q8NFL0 401 aa13.3□□□□□ -0.28
NELFE-201ENST00000375425 OR2L5Q8NG80 312 aa13.3□□□□□ -0.28
NELFE-201ENST00000375425 FBXO25Q8TCJ0 367 aa13.3□□□□□ -0.28
NELFE-201ENST00000375425 PTCD3Q96EY7 689 aaKnown RBP13.3□□□□□ -0.28
NELFE-201ENST00000375425 QRFPRQ96P65 431 aa13.3□□□□□ -0.28
NELFE-201ENST00000375425 TRIM45Q9H8W5 580 aaPredicted RBP13.3□□□□□ -0.28
NELFE-201ENST00000375425 PRTFDC1Q9NRG1 225 aa13.3□□□□□ -0.28
NELFE-201ENST00000375425 RNF112Q9ULX5 631 aa13.3□□□□□ -0.28
NELFE-201ENST00000375425 CLDN16Q9Y5I7 305 aa13.3□□□□□ -0.28
NELFE-201ENST00000375425 TRBV11-1A0A0K0K1C0 115 aa13.29□□□□□ -0.28
NELFE-201ENST00000375425 ARHGAP10A1A4S6 786 aa13.29□□□□□ -0.28
NELFE-201ENST00000375425 TGFBR3LH3BV60 316 aa13.29□□□□□ -0.28
NELFE-201ENST00000375425 FCHO1O14526 889 aa13.29□□□□□ -0.28
NELFE-201ENST00000375425 HNRNPRO43390 633 aaKnown RBP13.29□□□□□ -0.28
NELFE-201ENST00000375425 ASNA1O43681 348 aa13.29□□□□□ -0.28
NELFE-201ENST00000375425 CCNT2O60583 730 aaKnown RBP13.29□□□□□ -0.28
NELFE-201ENST00000375425 CD22P20273 847 aa13.29□□□□□ -0.28
NELFE-201ENST00000375425 PPP2R1BP30154 601 aa13.29□□□□□ -0.28
NELFE-201ENST00000375425 TRHRP34981 398 aaPredicted RBP13.29□□□□□ -0.28
NELFE-201ENST00000375425 GMPRP36959 345 aa13.29□□□□□ -0.28
NELFE-201ENST00000375425 RAB38P57729 211 aa13.29□□□□□ -0.28
NELFE-201ENST00000375425 CAV1Q03135 178 aa13.29□□□□□ -0.28
NELFE-201ENST00000375425 SLC13A2Q13183 592 aa13.29□□□□□ -0.28
NELFE-201ENST00000375425 ART3Q13508 389 aa13.29□□□□□ -0.28
NELFE-201ENST00000375425 PDK4Q16654 411 aa13.29□□□□□ -0.28
NELFE-201ENST00000375425 KBTBD12Q3ZCT8 623 aa13.29□□□□□ -0.28
NELFE-201ENST00000375425 TRIM40Q6P9F5 258 aa13.29□□□□□ -0.28
NELFE-201ENST00000375425 ABHD17CQ6PCB6 329 aa13.29□□□□□ -0.28
NELFE-201ENST00000375425 RAPH1Q70E73 1250 aa13.29□□□□□ -0.28
NELFE-201ENST00000375425 ISCA2Q86U28 154 aa13.29□□□□□ -0.28
NELFE-201ENST00000375425 CCDC25Q86WR0 208 aa13.29□□□□□ -0.28
NELFE-201ENST00000375425 SPPL2CQ8IUH8 684 aa13.29□□□□□ -0.28
NELFE-201ENST00000375425 SIAH3Q8IW03 269 aa13.29□□□□□ -0.28
NELFE-201ENST00000375425 ZNF595Q8IYB9 648 aa13.29□□□□□ -0.28
NELFE-201ENST00000375425 ARMC10Q8N2F6 343 aa13.29□□□□□ -0.28
NELFE-201ENST00000375425 CPSF7Q8N684 471 aaKnown RBP13.29□□□□□ -0.28
NELFE-201ENST00000375425 FAM47BQ8NA70 645 aa13.29□□□□□ -0.28
NELFE-201ENST00000375425 PDPRQ8NCN5 879 aa13.29□□□□□ -0.28
NELFE-201ENST00000375425 STAG3L4Q8TBR4 150 aa13.29□□□□□ -0.28
NELFE-201ENST00000375425 MARVELD3Q96A59 401 aa13.29□□□□□ -0.28
NELFE-201ENST00000375425 TMEM125Q96AQ2 219 aa13.29□□□□□ -0.28
NELFE-201ENST00000375425 WDR34Q96EX3 536 aa13.29□□□□□ -0.28
NELFE-201ENST00000375425 F2RL3Q96RI0 385 aa13.29□□□□□ -0.28
NELFE-201ENST00000375425 EFCAB11Q9BUY7 163 aa13.29□□□□□ -0.28
NELFE-201ENST00000375425 CD244Q9BZW8 370 aa13.29□□□□□ -0.28
NELFE-201ENST00000375425 PRDM7Q9NQW5 492 aa13.29□□□□□ -0.28
NELFE-201ENST00000375425 TINAGQ9UJW2 476 aa13.29□□□□□ -0.28
NELFE-201ENST00000375425 FBXW2Q9UKT8 454 aa13.29□□□□□ -0.28
NELFE-201ENST00000375425 MRPS33Q9Y291 106 aaKnown RBP13.29□□□□□ -0.28
NELFE-201ENST00000375425 ZNF835Q9Y2P0 537 aa13.29□□□□□ -0.28
NELFE-201ENST00000375425 ASB1Q9Y576 335 aa13.29□□□□□ -0.28
NELFE-201ENST00000375425 CREBBPQ92793 2442 aa13.28□□□□□ -0.28
NELFE-201ENST00000375425 CYR61O00622 381 aa13.28□□□□□ -0.28
NELFE-201ENST00000375425 NME2P1O60361 137 aa13.28□□□□□ -0.28
NELFE-201ENST00000375425 S100BP04271 92 aaPredicted RBP13.28□□□□□ -0.28
NELFE-201ENST00000375425 ESRRAP11474 423 aaPredicted RBP13.28□□□□□ -0.28
NELFE-201ENST00000375425 EPORP19235 508 aa13.28□□□□□ -0.28
NELFE-201ENST00000375425 NME2P22392 152 aa13.28□□□□□ -0.28
NELFE-201ENST00000375425 MAGEA4P43358 317 aa13.28□□□□□ -0.28
NELFE-201ENST00000375425 GPR143P51810 404 aa13.28□□□□□ -0.28
NELFE-201ENST00000375425 MTTPP55157 894 aa13.28□□□□□ -0.28
NELFE-201ENST00000375425 LIM2P55344 173 aa13.28□□□□□ -0.28
NELFE-201ENST00000375425 IRF8Q02556 426 aa13.28□□□□□ -0.28
NELFE-201ENST00000375425 DLG1Q12959 904 aa13.28□□□□□ -0.28
NELFE-201ENST00000375425 CHIT1Q13231 466 aa13.28□□□□□ -0.28
NELFE-201ENST00000375425 LAPTM5Q13571 262 aa13.28□□□□□ -0.28
NELFE-201ENST00000375425 TERF2Q15554 542 aa13.28□□□□□ -0.28
NELFE-201ENST00000375425 HIST2H2ACQ16777 129 aaPredicted RBP13.28□□□□□ -0.28
NELFE-201ENST00000375425 RNFT1Q5M7Z0 435 aa13.28□□□□□ -0.28
NELFE-201ENST00000375425 HIST2H2AA3Q6FI13 130 aa13.28□□□□□ -0.28
NELFE-201ENST00000375425 CMC1Q7Z7K0 106 aa13.28□□□□□ -0.28
NELFE-201ENST00000375425 C17orf53Q8N3J3 647 aaPredicted RBP13.28□□□□□ -0.28
NELFE-201ENST00000375425 ZNF808Q8N4W9 903 aaPredicted RBP13.28□□□□□ -0.28
NELFE-201ENST00000375425 ADAMTS18Q8TE60 1221 aa13.28□□□□□ -0.28
NELFE-201ENST00000375425 FBF1Q8TES7 1133 aa13.28□□□□□ -0.28
NELFE-201ENST00000375425 EXT2Q93063 718 aa13.28□□□□□ -0.28
NELFE-201ENST00000375425 MAGED4Q96JG8 741 aa13.28□□□□□ -0.28
NELFE-201ENST00000375425 SERINC2Q96SA4 455 aa13.28□□□□□ -0.28
NELFE-201ENST00000375425 CSF3RQ99062 836 aa13.28□□□□□ -0.28
NELFE-201ENST00000375425 ALG9Q9H6U8 611 aa13.28□□□□□ -0.28
NELFE-201ENST00000375425 COPS7BQ9H9Q2 264 aaPredicted RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms