RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 LRCH4O75427 683 aa14.76□□□□□ -0.05
COL5A1-201ENST00000371817 HGSNATQ68CP4 663 aa14.76□□□□□ -0.05
COL5A1-201ENST00000371817 NAPRTQ6XQN6 538 aa14.76□□□□□ -0.05
COL5A1-201ENST00000371817 EPYCQ99645 322 aa14.76□□□□□ -0.05
COL5A1-201ENST00000371817 ZBTB20Q9HC78 741 aaPredicted RBP14.76□□□□□ -0.05
COL5A1-201ENST00000371817 ASB4Q9Y574 426 aa14.76□□□□□ -0.05
COL5A1-201ENST00000371817 NRCAMQ92823 1304 aa14.76□□□□□ -0.05
COL5A1-201ENST00000371817 FAM170BA6NMN3 283 aa14.76□□□□□ -0.05
COL5A1-201ENST00000371817 ESR1P03372 595 aa14.76□□□□□ -0.05
COL5A1-201ENST00000371817 PRKCZQ05513 592 aa14.76□□□□□ -0.05
COL5A1-201ENST00000371817 COTL1Q14019 142 aa14.76□□□□□ -0.05
COL5A1-201ENST00000371817 INTS5Q6P9B9 1019 aaKnown RBP14.76□□□□□ -0.05
COL5A1-201ENST00000371817 SIMC1Q8NDZ2 872 aa14.76□□□□□ -0.05
COL5A1-201ENST00000371817 CHTF18Q8WVB6 975 aa14.76□□□□□ -0.05
COL5A1-201ENST00000371817 SLC25A51Q9H1U9 297 aa14.76□□□□□ -0.05
COL5A1-201ENST00000371817 SCML2Q9UQR0 700 aa14.76□□□□□ -0.05
COL5A1-201ENST00000371817 PCDHB14Q9Y5E9 798 aa14.76□□□□□ -0.05
COL5A1-201ENST00000371817 C20orf202A1L168 122 aa14.76□□□□□ -0.05
COL5A1-201ENST00000371817 MEIOCA2RUB1 952 aa14.76□□□□□ -0.05
COL5A1-201ENST00000371817 LTKP29376 864 aa14.76□□□□□ -0.05
COL5A1-201ENST00000371817 DPP6P42658 865 aa14.76□□□□□ -0.05
COL5A1-201ENST00000371817 NSG1P42857 185 aa14.76□□□□□ -0.05
COL5A1-201ENST00000371817 PLA2G16P53816 162 aa14.76□□□□□ -0.05
COL5A1-201ENST00000371817 TTLQ8NG68 377 aa14.76□□□□□ -0.05
COL5A1-201ENST00000371817 COG8Q96MW5 612 aa14.76□□□□□ -0.05
COL5A1-201ENST00000371817 TXNL4BQ9NX01 149 aaKnown RBP14.76□□□□□ -0.05
COL5A1-201ENST00000371817 ADAMTS6Q9UKP5 1117 aa14.76□□□□□ -0.05
COL5A1-201ENST00000371817 ICKQ9UPZ9 632 aa14.76□□□□□ -0.05
COL5A1-201ENST00000371817 TNFRSF10AO00220 468 aa14.76□□□□□ -0.05
COL5A1-201ENST00000371817 IRF6O14896 467 aa14.76□□□□□ -0.05
COL5A1-201ENST00000371817 PRAF2O60831 178 aa14.76□□□□□ -0.05
COL5A1-201ENST00000371817 TPPPO94811 219 aa14.76□□□□□ -0.05
COL5A1-201ENST00000371817 SCAF4O95104 1147 aaKnown RBP14.76□□□□□ -0.05
COL5A1-201ENST00000371817 ART1P52961 327 aa14.76□□□□□ -0.05
COL5A1-201ENST00000371817 TAS2R20P59543 309 aa14.76□□□□□ -0.05
COL5A1-201ENST00000371817 TMPRSS12Q86WS5 348 aa14.76□□□□□ -0.05
COL5A1-201ENST00000371817 SIDT2Q8NBJ9 832 aaKnown RBP14.76□□□□□ -0.05
COL5A1-201ENST00000371817 SEC61A2Q9H9S3 476 aa14.76□□□□□ -0.05
COL5A1-201ENST00000371817 MADDQ8WXG6 1647 aa14.76□□□□□ -0.05
COL5A1-201ENST00000371817 CLN5O75503 358 aa14.76□□□□□ -0.05
COL5A1-201ENST00000371817 CD3GP09693 182 aa14.76□□□□□ -0.05
COL5A1-201ENST00000371817 HLA-EP13747 358 aa14.76□□□□□ -0.05
COL5A1-201ENST00000371817 TAS2R31P59538 309 aa14.76□□□□□ -0.05
COL5A1-201ENST00000371817 LY6KQ17RY6 165 aa14.76□□□□□ -0.05
COL5A1-201ENST00000371817 GAL3ST4Q96RP7 486 aa14.76□□□□□ -0.05
COL5A1-201ENST00000371817 OR51J1Q9H342 316 aa14.76□□□□□ -0.05
COL5A1-201ENST00000371817 FN3KQ9H479 309 aa14.76□□□□□ -0.05
COL5A1-201ENST00000371817 NEXMIFQ5QGS0 1516 aa14.75□□□□□ -0.05
COL5A1-201ENST00000371817 NPIPA5E9PKD4 350 aa14.75□□□□□ -0.05
COL5A1-201ENST00000371817 SAP18O00422 153 aaKnown RBP14.75□□□□□ -0.05
COL5A1-201ENST00000371817 SCDO00767 359 aa14.75□□□□□ -0.05
COL5A1-201ENST00000371817 CETPP11597 493 aa14.75□□□□□ -0.05
COL5A1-201ENST00000371817 ABHD18Q0P651 414 aa14.75□□□□□ -0.05
COL5A1-201ENST00000371817 TREML1Q86YW5 311 aa14.75□□□□□ -0.05
COL5A1-201ENST00000371817 TMEM145Q8NBT3 493 aa14.75□□□□□ -0.05
COL5A1-201ENST00000371817 CERKQ8TCT0 537 aa14.75□□□□□ -0.05
COL5A1-201ENST00000371817 NPIPA1Q9UND3 350 aa14.75□□□□□ -0.05
COL5A1-201ENST00000371817 SLC1A7O00341 560 aa14.75□□□□□ -0.05
COL5A1-201ENST00000371817 OPN1SWP03999 348 aa14.75□□□□□ -0.05
COL5A1-201ENST00000371817 PRKACGP22612 351 aa14.75□□□□□ -0.05
COL5A1-201ENST00000371817 RPL10P27635 214 aaKnown RBP14.75□□□□□ -0.05
COL5A1-201ENST00000371817 PTCHD3Q3KNS1 767 aa14.75□□□□□ -0.05
COL5A1-201ENST00000371817 ABHD11Q8NFV4 315 aa14.75□□□□□ -0.05
COL5A1-201ENST00000371817 OR4C15Q8NGM1 316 aa14.75□□□□□ -0.05
COL5A1-201ENST00000371817 DNAJC13O75165 2243 aa14.75□□□□□ -0.05
COL5A1-201ENST00000371817 OR2AG2A6NM03 316 aa14.75□□□□□ -0.05
COL5A1-201ENST00000371817 SERPINA7P05543 415 aa14.75□□□□□ -0.05
COL5A1-201ENST00000371817 DRD5P21918 477 aa14.75□□□□□ -0.05
COL5A1-201ENST00000371817 GTF2A2P52657 109 aa14.75□□□□□ -0.05
COL5A1-201ENST00000371817 BACE1P56817 501 aa14.75□□□□□ -0.05
COL5A1-201ENST00000371817 PGM2L1Q6PCE3 622 aa14.75□□□□□ -0.05
COL5A1-201ENST00000371817 MOB1BQ7L9L4 216 aa14.75□□□□□ -0.05
COL5A1-201ENST00000371817 BTN2A3PQ96KV6 586 aa14.75□□□□□ -0.05
COL5A1-201ENST00000371817 MFFQ9GZY8 342 aa14.75□□□□□ -0.05
COL5A1-201ENST00000371817 PCDHB3Q9Y5E6 796 aa14.75□□□□□ -0.05
COL5A1-201ENST00000371817 A0A1W2PS29 197 aa14.75□□□□□ -0.05
COL5A1-201ENST00000371817 ETFAP13804 333 aa14.75□□□□□ -0.05
COL5A1-201ENST00000371817 IGFN1Q86VF2 1251 aa14.75□□□□□ -0.05
COL5A1-201ENST00000371817 LILRB2Q8N423 598 aa14.75□□□□□ -0.05
COL5A1-201ENST00000371817 SLC25A36Q96CQ1 311 aa14.75□□□□□ -0.05
COL5A1-201ENST00000371817 CRAMP1Q96RY5 1269 aa14.75□□□□□ -0.05
COL5A1-201ENST00000371817 PRDM9Q9NQV7 894 aa14.75□□□□□ -0.05
COL5A1-201ENST00000371817 GRHPRQ9UBQ7 328 aa14.75□□□□□ -0.05
COL5A1-201ENST00000371817 ZMAT5Q9UDW3 170 aaKnown RBP14.75□□□□□ -0.05
COL5A1-201ENST00000371817 PAN3Q58A45 887 aaKnown RBP14.75□□□□□ -0.05
COL5A1-201ENST00000371817 NETO2Q8NC67 525 aa14.75□□□□□ -0.05
COL5A1-201ENST00000371817 PROKR1Q8TCW9 393 aa14.75□□□□□ -0.05
COL5A1-201ENST00000371817 MMP28Q9H239 520 aa14.75□□□□□ -0.05
COL5A1-201ENST00000371817 NIT2Q9NQR4 276 aa14.75□□□□□ -0.05
COL5A1-201ENST00000371817 FAM118AQ9NWS6 357 aa14.75□□□□□ -0.05
COL5A1-201ENST00000371817 HOXC6P09630 235 aa14.75□□□□□ -0.05
COL5A1-201ENST00000371817 ALAS2P22557 587 aa14.75□□□□□ -0.05
COL5A1-201ENST00000371817 PITPNBP48739 271 aa14.75□□□□□ -0.05
COL5A1-201ENST00000371817 CDK6Q00534 326 aa14.75□□□□□ -0.05
COL5A1-201ENST00000371817 SLC27A4Q6P1M0 643 aa14.75□□□□□ -0.05
COL5A1-201ENST00000371817 DNAJC19Q96DA6 116 aa14.75□□□□□ -0.05
COL5A1-201ENST00000371817 APOA2P02652 100 aa14.74□□□□□ -0.05
COL5A1-201ENST00000371817 CKMT1AP12532 417 aa14.74□□□□□ -0.05
COL5A1-201ENST00000371817 RRAS2P62070 204 aaPredicted RBP14.74□□□□□ -0.05
COL5A1-201ENST00000371817 CDK15Q96Q40 435 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms