RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 CHST8Q9H2A9 424 aa16.67■□□□□ 0.26
SSBP3-203ENST00000371319 NUP214P35658 2090 aaPredicted RBP16.66■□□□□ 0.26
SSBP3-203ENST00000371319 A0A0J9YY10 115 aa16.66■□□□□ 0.26
SSBP3-203ENST00000371319 A0A1W2PRB8 838 aa16.66■□□□□ 0.26
SSBP3-203ENST00000371319 VILLO15195 856 aa16.66■□□□□ 0.26
SSBP3-203ENST00000371319 NOBOXO60393 691 aa16.66■□□□□ 0.26
SSBP3-203ENST00000371319 PDGFBP01127 241 aaPredicted RBP16.66■□□□□ 0.26
SSBP3-203ENST00000371319 ABCB1P08183 1280 aaPredicted RBP16.66■□□□□ 0.26
SSBP3-203ENST00000371319 PVRP15151 417 aa16.66■□□□□ 0.26
SSBP3-203ENST00000371319 HIST1H1TP22492 207 aaPredicted RBP16.66■□□□□ 0.26
SSBP3-203ENST00000371319 PPIBP23284 216 aaKnown RBP16.66■□□□□ 0.26
SSBP3-203ENST00000371319 CSNK1EP49674 416 aaKnown RBP16.66■□□□□ 0.26
SSBP3-203ENST00000371319 STXBP1P61764 594 aaKnown RBP16.66■□□□□ 0.26
SSBP3-203ENST00000371319 PPP1CAP62136 330 aa16.66■□□□□ 0.26
SSBP3-203ENST00000371319 GRAMD1BQ3KR37 738 aa16.66■□□□□ 0.26
SSBP3-203ENST00000371319 TSSK4Q6SA08 328 aa16.66■□□□□ 0.26
SSBP3-203ENST00000371319 AMIGO2Q86SJ2 522 aa16.66■□□□□ 0.26
SSBP3-203ENST00000371319 OOSP2Q86WS3 158 aa16.66■□□□□ 0.26
SSBP3-203ENST00000371319 PTOV1Q86YD1 416 aa16.66■□□□□ 0.26
SSBP3-203ENST00000371319 ZCCHC7Q8N3Z6 543 aaKnown RBP16.66■□□□□ 0.26
SSBP3-203ENST00000371319 ARL14Q8N4G2 192 aa16.66■□□□□ 0.26
SSBP3-203ENST00000371319 OR8K5Q8NH50 307 aa16.66■□□□□ 0.26
SSBP3-203ENST00000371319 BAHD1Q8TBE0 780 aaPredicted RBP16.66■□□□□ 0.26
SSBP3-203ENST00000371319 PNPT1Q8TCS8 783 aaKnown RBP16.66■□□□□ 0.26
SSBP3-203ENST00000371319 RSC1A1Q92681 617 aa16.66■□□□□ 0.26
SSBP3-203ENST00000371319 THAP11Q96EK4 314 aa16.66■□□□□ 0.26
SSBP3-203ENST00000371319 NAF1Q96HR8 494 aaKnown RBP16.66■□□□□ 0.26
SSBP3-203ENST00000371319 KLHL25Q9H0H3 589 aa16.66■□□□□ 0.26
SSBP3-203ENST00000371319 SEMA6AQ9H2E6 1030 aa16.66■□□□□ 0.26
SSBP3-203ENST00000371319 SLAMF7Q9NQ25 335 aa16.66■□□□□ 0.26
SSBP3-203ENST00000371319 DTNAQ9Y4J8 743 aa16.66■□□□□ 0.26
SSBP3-203ENST00000371319 ASB4Q9Y574 426 aa16.66■□□□□ 0.26
SSBP3-203ENST00000371319 P2RX6O15547 441 aa16.65■□□□□ 0.26
SSBP3-203ENST00000371319 GMNNO75496 209 aa16.65■□□□□ 0.26
SSBP3-203ENST00000371319 CREG1O75629 220 aa16.65■□□□□ 0.26
SSBP3-203ENST00000371319 KCNK5O95279 499 aa16.65■□□□□ 0.26
SSBP3-203ENST00000371319 HOXA6P31267 233 aa16.65■□□□□ 0.26
SSBP3-203ENST00000371319 FRKP42685 505 aaPredicted RBP16.65■□□□□ 0.26
SSBP3-203ENST00000371319 ALDH9A1P49189 494 aa16.65■□□□□ 0.26
SSBP3-203ENST00000371319 AQP4P55087 323 aa16.65■□□□□ 0.26
SSBP3-203ENST00000371319 SNRPNP63162 240 aaKnown RBP16.65■□□□□ 0.26
SSBP3-203ENST00000371319 RELAQ04206 551 aa16.65■□□□□ 0.26
SSBP3-203ENST00000371319 SLAMF1Q13291 335 aa16.65■□□□□ 0.26
SSBP3-203ENST00000371319 MAP7Q14244 749 aa16.65■□□□□ 0.26
SSBP3-203ENST00000371319 ADRM1Q16186 407 aa16.65■□□□□ 0.26
SSBP3-203ENST00000371319 TLDC1Q6P9B6 456 aa16.65■□□□□ 0.26
SSBP3-203ENST00000371319 TRIM40Q6P9F5 258 aa16.65■□□□□ 0.26
SSBP3-203ENST00000371319 C17orf82Q86X59 251 aaPredicted RBP16.65■□□□□ 0.26
SSBP3-203ENST00000371319 ANKFN1Q8N957 763 aa16.65■□□□□ 0.26
SSBP3-203ENST00000371319 ACOT4Q8N9L9 421 aa16.65■□□□□ 0.26
SSBP3-203ENST00000371319 KCT2Q8NC54 265 aa16.65■□□□□ 0.26
SSBP3-203ENST00000371319 CATSPER1Q8NEC5 780 aa16.65■□□□□ 0.26
SSBP3-203ENST00000371319 SRFBP1Q8NEF9 429 aaKnown RBP16.65■□□□□ 0.26
SSBP3-203ENST00000371319 GAL3ST3Q96A11 431 aa16.65■□□□□ 0.26
SSBP3-203ENST00000371319 AGPAT4Q9NRZ5 378 aa16.65■□□□□ 0.26
SSBP3-203ENST00000371319 PCDHGB4Q9UN71 923 aa16.65■□□□□ 0.26
SSBP3-203ENST00000371319 A0A0J9YVX5 310 aa16.64■□□□□ 0.25
SSBP3-203ENST00000371319 PDPK1O15530 556 aa16.64■□□□□ 0.25
SSBP3-203ENST00000371319 AQP9O43315 295 aa16.64■□□□□ 0.25
SSBP3-203ENST00000371319 PRAMEF10O60809 474 aa16.64■□□□□ 0.25
SSBP3-203ENST00000371319 RETP07949 1114 aa16.64■□□□□ 0.25
SSBP3-203ENST00000371319 DRD2P14416 443 aa16.64■□□□□ 0.25
SSBP3-203ENST00000371319 CERS1P27544 350 aa16.64■□□□□ 0.25
SSBP3-203ENST00000371319 TSFMP43897 325 aaKnown RBP16.64■□□□□ 0.25
SSBP3-203ENST00000371319 FASLGP48023 281 aa16.64■□□□□ 0.25
SSBP3-203ENST00000371319 MVDP53602 400 aa16.64■□□□□ 0.25
SSBP3-203ENST00000371319 PCBP4P57723 403 aaKnown RBP16.64■□□□□ 0.25
SSBP3-203ENST00000371319 RAB8AP61006 207 aa16.64■□□□□ 0.25
SSBP3-203ENST00000371319 RGS1Q08116 209 aa16.64■□□□□ 0.25
SSBP3-203ENST00000371319 SLC9A5Q14940 896 aa16.64■□□□□ 0.25
SSBP3-203ENST00000371319 RGNQ15493 299 aa16.64■□□□□ 0.25
SSBP3-203ENST00000371319 WDR45BQ5MNZ6 344 aa16.64■□□□□ 0.25
SSBP3-203ENST00000371319 ZCCHC8Q6NZY4 707 aaKnown RBP16.64■□□□□ 0.25
SSBP3-203ENST00000371319 FAM180BQ6P0A1 224 aa16.64■□□□□ 0.25
SSBP3-203ENST00000371319 RNF44Q7L0R7 432 aa16.64■□□□□ 0.25
SSBP3-203ENST00000371319 DGLUCYQ7Z3D6 616 aa16.64■□□□□ 0.25
SSBP3-203ENST00000371319 ZNF438Q7Z4V0 828 aa16.64■□□□□ 0.25
SSBP3-203ENST00000371319 NATD1Q8N6N6 113 aa16.64■□□□□ 0.25
SSBP3-203ENST00000371319 FAM86B1Q8N7N1 296 aa16.64■□□□□ 0.25
SSBP3-203ENST00000371319 AVL9Q8NBF6 648 aa16.64■□□□□ 0.25
SSBP3-203ENST00000371319 NETO1Q8TDF5 533 aa16.64■□□□□ 0.25
SSBP3-203ENST00000371319 FAM162AQ96A26 154 aa16.64■□□□□ 0.25
SSBP3-203ENST00000371319 SLC35A5Q9BS91 424 aa16.64■□□□□ 0.25
SSBP3-203ENST00000371319 SPATA9Q9BWV2 254 aa16.64■□□□□ 0.25
SSBP3-203ENST00000371319 UCK1Q9HA47 277 aa16.64■□□□□ 0.25
SSBP3-203ENST00000371319 TAS2R9Q9NYW1 312 aa16.64■□□□□ 0.25
SSBP3-203ENST00000371319 C5AR2Q9P296 337 aa16.64■□□□□ 0.25
SSBP3-203ENST00000371319 DOLKQ9UPQ8 538 aa16.64■□□□□ 0.25
SSBP3-203ENST00000371319 CORO2BQ9UQ03 480 aa16.64■□□□□ 0.25
SSBP3-203ENST00000371319 V9GYQ6 96 aa16.64■□□□□ 0.25
SSBP3-203ENST00000371319 A0A1W2PR48 441 aa16.64■□□□□ 0.25
SSBP3-203ENST00000371319 BCAT2O15382 392 aaPredicted RBP16.64■□□□□ 0.25
SSBP3-203ENST00000371319 SH3BP5O60239 455 aa16.64■□□□□ 0.25
SSBP3-203ENST00000371319 ZNF888P0CJ79 500 aaPredicted RBP16.64■□□□□ 0.25
SSBP3-203ENST00000371319 SMIM10L1P0DMW3 83 aa16.64■□□□□ 0.25
SSBP3-203ENST00000371319 BMP2P12643 396 aa16.64■□□□□ 0.25
SSBP3-203ENST00000371319 TDGF1P13385 188 aa16.64■□□□□ 0.25
SSBP3-203ENST00000371319 TYRP1P17643 537 aa16.64■□□□□ 0.25
SSBP3-203ENST00000371319 FNTBP49356 437 aa16.64■□□□□ 0.25
SSBP3-203ENST00000371319 HNRNPKP61978 463 aaKnown RBP eCLIP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms