RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 ANXA8L1Q5VT79 327 aa22.68■■□□□ 1.22
SNX3-203ENST00000368979 NANOGP8Q6NSW7 305 aa22.68■■□□□ 1.22
SNX3-203ENST00000368979 TMEM214Q6NUQ4 689 aaKnown RBP22.68■■□□□ 1.22
SNX3-203ENST00000368979 GUSBP11Q6P575 273 aa22.68■■□□□ 1.22
SNX3-203ENST00000368979 ANKRD46Q86W74 232 aa22.68■■□□□ 1.22
SNX3-203ENST00000368979 PLXDC1Q8IUK5 500 aa22.68■■□□□ 1.22
SNX3-203ENST00000368979 MSRB3Q8IXL7 192 aa22.68■■□□□ 1.22
SNX3-203ENST00000368979 CCDC124Q96CT7 223 aaKnown RBP22.68■■□□□ 1.22
SNX3-203ENST00000368979 ZNF764Q96H86 408 aaPredicted RBP22.68■■□□□ 1.22
SNX3-203ENST00000368979 INPP5KQ9BT40 448 aa22.68■■□□□ 1.22
SNX3-203ENST00000368979 GTPBP2Q9BX10 602 aaKnown RBP22.68■■□□□ 1.22
SNX3-203ENST00000368979 NANOGQ9H9S0 305 aa22.68■■□□□ 1.22
SNX3-203ENST00000368979 TEX10Q9NXF1 929 aaPredicted RBP22.68■■□□□ 1.22
SNX3-203ENST00000368979 VAPAQ9P0L0 249 aa22.68■■□□□ 1.22
SNX3-203ENST00000368979 SH3BP4Q9P0V3 963 aa22.68■■□□□ 1.22
SNX3-203ENST00000368979 ASB4Q9Y574 426 aa22.68■■□□□ 1.22
SNX3-203ENST00000368979 EME2A4GXA9 379 aaPredicted RBP22.67■■□□□ 1.22
SNX3-203ENST00000368979 PRORSD1PA6NEY8 169 aa22.67■■□□□ 1.22
SNX3-203ENST00000368979 PRR33A8MZF0 331 aa22.67■■□□□ 1.22
SNX3-203ENST00000368979 MAP3K7O43318 606 aa22.67■■□□□ 1.22
SNX3-203ENST00000368979 EIF2S1P05198 315 aaKnown RBP22.67■■□□□ 1.22
SNX3-203ENST00000368979 ME2P23368 584 aa22.67■■□□□ 1.22
SNX3-203ENST00000368979 PTPN6P29350 595 aa22.67■■□□□ 1.22
SNX3-203ENST00000368979 SLAMF1Q13291 335 aa22.67■■□□□ 1.22
SNX3-203ENST00000368979 KPNB1Q14974 876 aaKnown RBP22.67■■□□□ 1.22
SNX3-203ENST00000368979 SUZ12Q15022 739 aaKnown RBP22.67■■□□□ 1.22
SNX3-203ENST00000368979 PRSS53Q2L4Q9 553 aa22.67■■□□□ 1.22
SNX3-203ENST00000368979 AMZ1Q400G9 498 aa22.67■■□□□ 1.22
SNX3-203ENST00000368979 WDR74Q6RFH5 385 aaPredicted RBP22.67■■□□□ 1.22
SNX3-203ENST00000368979 ABHD13Q7L211 337 aa22.67■■□□□ 1.22
SNX3-203ENST00000368979 TICAM1Q8IUC6 712 aa22.67■■□□□ 1.22
SNX3-203ENST00000368979 MCATQ8IVS2 390 aaKnown RBP22.67■■□□□ 1.22
SNX3-203ENST00000368979 RNF148Q8N7C7 305 aa22.67■■□□□ 1.22
SNX3-203ENST00000368979 ZCCHC10Q8TBK6 192 aa22.67■■□□□ 1.22
SNX3-203ENST00000368979 MIEF2Q96C03 454 aa22.67■■□□□ 1.22
SNX3-203ENST00000368979 CCDC115Q96NT0 180 aa22.67■■□□□ 1.22
SNX3-203ENST00000368979 CCDC3Q9BQI4 270 aa22.67■■□□□ 1.22
SNX3-203ENST00000368979 ROGDIQ9GZN7 287 aa22.67■■□□□ 1.22
SNX3-203ENST00000368979 COPS7BQ9H9Q2 264 aaPredicted RBP22.67■■□□□ 1.22
SNX3-203ENST00000368979 MIEF1Q9NQG6 463 aa22.67■■□□□ 1.22
SNX3-203ENST00000368979 SLC25A37Q9NYZ2 338 aa22.67■■□□□ 1.22
SNX3-203ENST00000368979 SEMA5BQ9P283 1151 aa22.67■■□□□ 1.22
SNX3-203ENST00000368979 BTNL2Q9UIR0 455 aa22.67■■□□□ 1.22
SNX3-203ENST00000368979 POMPQ9Y244 141 aa22.67■■□□□ 1.22
SNX3-203ENST00000368979 PRSS51A0A1B0GVH4 220 aa22.67■■□□□ 1.22
SNX3-203ENST00000368979 RNASET2O00584 256 aaKnown RBP22.67■■□□□ 1.22
SNX3-203ENST00000368979 KHNYNO15037 678 aaKnown RBP22.67■■□□□ 1.22
SNX3-203ENST00000368979 ZBTB11O95625 1053 aaPredicted RBP22.67■■□□□ 1.22
SNX3-203ENST00000368979 MLLT3P42568 568 aaPredicted RBP22.67■■□□□ 1.22
SNX3-203ENST00000368979 CDKN2CP42773 168 aa22.67■■□□□ 1.22
SNX3-203ENST00000368979 TRPC1P48995 793 aa22.67■■□□□ 1.22
SNX3-203ENST00000368979 BTN3A2P78410 334 aa22.67■■□□□ 1.22
SNX3-203ENST00000368979 MPEG1Q2M385 716 aa22.67■■□□□ 1.22
SNX3-203ENST00000368979 MUM1Q2TAK8 710 aa22.67■■□□□ 1.22
SNX3-203ENST00000368979 RABL3Q5HYI8 236 aa22.67■■□□□ 1.22
SNX3-203ENST00000368979 PERM1Q5SV97 790 aa22.67■■□□□ 1.22
SNX3-203ENST00000368979 C1orf146Q5VVC0 180 aa22.67■■□□□ 1.22
SNX3-203ENST00000368979 TCEAL6Q6IPX3 200 aa22.67■■□□□ 1.22
SNX3-203ENST00000368979 DNAJC14Q6Y2X3 702 aaPredicted RBP22.67■■□□□ 1.22
SNX3-203ENST00000368979 OR8J3Q8NGG0 315 aa22.67■■□□□ 1.22
SNX3-203ENST00000368979 TCEAL3Q969E4 200 aa22.67■■□□□ 1.22
SNX3-203ENST00000368979 ANKRD27Q96NW4 1050 aa22.67■■□□□ 1.22
SNX3-203ENST00000368979 NLNQ9BYT8 704 aa22.67■■□□□ 1.22
SNX3-203ENST00000368979 TRIM8Q9BZR9 551 aa22.67■■□□□ 1.22
SNX3-203ENST00000368979 SLC6A13Q9NSD5 602 aa22.67■■□□□ 1.22
SNX3-203ENST00000368979 RAPGEFL1Q9UHV5 662 aa22.67■■□□□ 1.22
SNX3-203ENST00000368979 RAB23Q9ULC3 237 aa22.67■■□□□ 1.22
SNX3-203ENST00000368979 RFXANKO14593 260 aa22.66■■□□□ 1.22
SNX3-203ENST00000368979 SRPX2O60687 465 aaPredicted RBP22.66■■□□□ 1.22
SNX3-203ENST00000368979 DRD2P14416 443 aa22.66■■□□□ 1.22
SNX3-203ENST00000368979 LRRC74AQ0VAA2 488 aa22.66■■□□□ 1.22
SNX3-203ENST00000368979 SQSTM1Q13501 440 aa22.66■■□□□ 1.22
SNX3-203ENST00000368979 SPATS1Q496A3 300 aa22.66■■□□□ 1.22
SNX3-203ENST00000368979 GTDC1Q4AE62 458 aa22.66■■□□□ 1.22
SNX3-203ENST00000368979 C6orf163Q5TEZ5 329 aa22.66■■□□□ 1.22
SNX3-203ENST00000368979 CLECL1Q8IZS7 167 aa22.66■■□□□ 1.22
SNX3-203ENST00000368979 ARHGEF39Q8N4T4 335 aa22.66■■□□□ 1.22
SNX3-203ENST00000368979 VPS37AQ8NEZ2 397 aa22.66■■□□□ 1.22
SNX3-203ENST00000368979 ZNF285Q96NJ3 590 aa22.66■■□□□ 1.22
SNX3-203ENST00000368979 SERINC2Q96SA4 455 aa22.66■■□□□ 1.22
SNX3-203ENST00000368979 PDE7BQ9NP56 450 aa22.66■■□□□ 1.22
SNX3-203ENST00000368979 LYARQ9NX58 379 aaKnown RBP22.66■■□□□ 1.22
SNX3-203ENST00000368979 TMEM9Q9P0T7 183 aa22.66■■□□□ 1.22
SNX3-203ENST00000368979 SUCOQ9UBS9 1254 aaKnown RBP22.66■■□□□ 1.22
SNX3-203ENST00000368979 KLHL3Q9UH77 587 aa22.66■■□□□ 1.22
SNX3-203ENST00000368979 MRPS2Q9Y399 296 aaKnown RBP22.66■■□□□ 1.22
SNX3-203ENST00000368979 PCDHB14Q9Y5E9 798 aa22.66■■□□□ 1.22
SNX3-203ENST00000368979 ARID1BQ8NFD5 2236 aaPredicted RBP22.66■■□□□ 1.22
SNX3-203ENST00000368979 CPED1A4D0V7 1026 aa22.65■■□□□ 1.22
SNX3-203ENST00000368979 GUCY1B2O75343 617 aa22.65■■□□□ 1.22
SNX3-203ENST00000368979 ZNF883P0CG24 379 aa22.65■■□□□ 1.22
SNX3-203ENST00000368979 ALOX12P18054 663 aa22.65■■□□□ 1.22
SNX3-203ENST00000368979 ACTR3P61158 418 aa22.65■■□□□ 1.22
SNX3-203ENST00000368979 RIPK1Q13546 671 aa22.65■■□□□ 1.22
SNX3-203ENST00000368979 PRTGQ2VWP7 1150 aa22.65■■□□□ 1.22
SNX3-203ENST00000368979 PROX2Q3B8N5 592 aa22.65■■□□□ 1.22
SNX3-203ENST00000368979 RUNDC3AQ59EK9 446 aa22.65■■□□□ 1.22
SNX3-203ENST00000368979 NDUFAF5Q5TEU4 345 aa22.65■■□□□ 1.22
SNX3-203ENST00000368979 USP53Q70EK8 1073 aa22.65■■□□□ 1.22
SNX3-203ENST00000368979 PRSS42Q7Z5A4 293 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms