RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 PARD6BQ9BYG5 372 aa13.8□□□□□ -0.2
SF3B5-201ENST00000367569 NT5DC2Q9H857 520 aa13.8□□□□□ -0.2
SF3B5-201ENST00000367569 ATP13A2Q9NQ11 1180 aa13.8□□□□□ -0.2
SF3B5-201ENST00000367569 COPG2Q9UBF2 871 aa13.8□□□□□ -0.2
SF3B5-201ENST00000367569 FETUBQ9UGM5 382 aa13.8□□□□□ -0.2
SF3B5-201ENST00000367569 CSAG2Q9Y5P2 127 aa13.8□□□□□ -0.2
SF3B5-201ENST00000367569 URADA6NGE7 173 aa13.79□□□□□ -0.2
SF3B5-201ENST00000367569 A8MUA0 341 aa13.79□□□□□ -0.2
SF3B5-201ENST00000367569 PSMD12O00232 456 aaPredicted RBP13.79□□□□□ -0.2
SF3B5-201ENST00000367569 DLX3O60479 287 aa13.79□□□□□ -0.2
SF3B5-201ENST00000367569 ETHE1O95571 254 aa13.79□□□□□ -0.2
SF3B5-201ENST00000367569 HPP00738 406 aa13.79□□□□□ -0.2
SF3B5-201ENST00000367569 F10P00742 488 aa13.79□□□□□ -0.2
SF3B5-201ENST00000367569 UQCRHP07919 91 aa13.79□□□□□ -0.2
SF3B5-201ENST00000367569 RPS13P62277 151 aaKnown RBP13.79□□□□□ -0.2
SF3B5-201ENST00000367569 IFFO1Q0D2I5 559 aa13.79□□□□□ -0.2
SF3B5-201ENST00000367569 AIMP2Q13155 320 aaKnown RBP13.79□□□□□ -0.2
SF3B5-201ENST00000367569 MRPL49Q13405 166 aaKnown RBP13.79□□□□□ -0.2
SF3B5-201ENST00000367569 EIF2S3LQ2VIR3 472 aaKnown RBP13.79□□□□□ -0.2
SF3B5-201ENST00000367569 PLEKHN1Q494U1 663 aaPredicted RBP13.79□□□□□ -0.2
SF3B5-201ENST00000367569 C4orf17Q53FE4 359 aa13.79□□□□□ -0.2
SF3B5-201ENST00000367569 SGO1Q5FBB7 561 aa13.79□□□□□ -0.2
SF3B5-201ENST00000367569 TCHHL1Q5QJ38 904 aaPredicted RBP13.79□□□□□ -0.2
SF3B5-201ENST00000367569 LINC00696Q6ZRV3 163 aa13.79□□□□□ -0.2
SF3B5-201ENST00000367569 UBE3DQ7Z6J8 389 aa13.79□□□□□ -0.2
SF3B5-201ENST00000367569 CLNKQ7Z7G1 428 aa13.79□□□□□ -0.2
SF3B5-201ENST00000367569 LAS2Q8IYD9 372 aa13.79□□□□□ -0.2
SF3B5-201ENST00000367569 SIRT6Q8N6T7 355 aa13.79□□□□□ -0.2
SF3B5-201ENST00000367569 OR2L5Q8NG80 312 aa13.79□□□□□ -0.2
SF3B5-201ENST00000367569 ZNF483Q8TF39 744 aaPredicted RBP13.79□□□□□ -0.2
SF3B5-201ENST00000367569 METTL21AQ8WXB1 218 aa13.79□□□□□ -0.2
SF3B5-201ENST00000367569 TBC1D20Q96BZ9 403 aa13.79□□□□□ -0.2
SF3B5-201ENST00000367569 C19orf60Q96EN9 201 aa13.79□□□□□ -0.2
SF3B5-201ENST00000367569 HBEGFQ99075 208 aa13.79□□□□□ -0.2
SF3B5-201ENST00000367569 ZNF552Q9H707 407 aaPredicted RBP13.79□□□□□ -0.2
SF3B5-201ENST00000367569 DMRT3Q9NQL9 472 aa13.79□□□□□ -0.2
SF3B5-201ENST00000367569 C5AR2Q9P296 337 aa13.79□□□□□ -0.2
SF3B5-201ENST00000367569 CNTRLQ7Z7A1 2325 aa13.78□□□□□ -0.2
SF3B5-201ENST00000367569 ARHGAP10A1A4S6 786 aa13.78□□□□□ -0.2
SF3B5-201ENST00000367569 MAGEB17A8MXT2 336 aa13.78□□□□□ -0.2
SF3B5-201ENST00000367569 STX16-NPEPL1H3BU86 382 aa13.78□□□□□ -0.2
SF3B5-201ENST00000367569 TGFBR3LH3BV60 316 aa13.78□□□□□ -0.2
SF3B5-201ENST00000367569 STX16O14662 325 aa13.78□□□□□ -0.2
SF3B5-201ENST00000367569 B3GALT2O43825 422 aa13.78□□□□□ -0.2
SF3B5-201ENST00000367569 PRKRAO75569 313 aaKnown RBP13.78□□□□□ -0.2
SF3B5-201ENST00000367569 ITGAMP11215 1152 aa13.78□□□□□ -0.2
SF3B5-201ENST00000367569 RNH1P13489 461 aaKnown RBP13.78□□□□□ -0.2
SF3B5-201ENST00000367569 PPP2R1BP30154 601 aa13.78□□□□□ -0.2
SF3B5-201ENST00000367569 SSR2P43308 183 aa13.78□□□□□ -0.2
SF3B5-201ENST00000367569 E2F2Q14209 437 aa13.78□□□□□ -0.2
SF3B5-201ENST00000367569 MYBPC3Q14896 1274 aa13.78□□□□□ -0.2
SF3B5-201ENST00000367569 ZRSR2Q15696 482 aaKnown RBP13.78□□□□□ -0.2
SF3B5-201ENST00000367569 ADPRMQ3LIE5 342 aa13.78□□□□□ -0.2
SF3B5-201ENST00000367569 SFT2D3Q587I9 215 aa13.78□□□□□ -0.2
SF3B5-201ENST00000367569 VWA5B1Q5TIE3 1220 aa13.78□□□□□ -0.2
SF3B5-201ENST00000367569 B3GNTL1Q67FW5 361 aaPredicted RBP13.78□□□□□ -0.2
SF3B5-201ENST00000367569 WDR93Q6P2C0 686 aa13.78□□□□□ -0.2
SF3B5-201ENST00000367569 ABHD17CQ6PCB6 329 aa13.78□□□□□ -0.2
SF3B5-201ENST00000367569 TMEM205Q6UW68 189 aa13.78□□□□□ -0.2
SF3B5-201ENST00000367569 OR4F6Q8NGB9 312 aa13.78□□□□□ -0.2
SF3B5-201ENST00000367569 BRIX1Q8TDN6 353 aaKnown RBP13.78□□□□□ -0.2
SF3B5-201ENST00000367569 TRPC4APQ8TEL6 797 aa13.78□□□□□ -0.2
SF3B5-201ENST00000367569 NECTIN3Q9NQS3 549 aa13.78□□□□□ -0.2
SF3B5-201ENST00000367569 MAP10Q9P2G4 905 aa13.78□□□□□ -0.2
SF3B5-201ENST00000367569 PLEKHB1Q9UF11 243 aaPredicted RBP13.78□□□□□ -0.2
SF3B5-201ENST00000367569 TNPO3Q9Y5L0 923 aaKnown RBP13.78□□□□□ -0.2
SF3B5-201ENST00000367569 CCDC189A1A4V9 331 aa13.77□□□□□ -0.21
SF3B5-201ENST00000367569 GLRA3O75311 464 aa13.77□□□□□ -0.21
SF3B5-201ENST00000367569 SUPT7LO94864 414 aa13.77□□□□□ -0.21
SF3B5-201ENST00000367569 OR4F21O95013 312 aa13.77□□□□□ -0.21
SF3B5-201ENST00000367569 CLDN9O95484 217 aa13.77□□□□□ -0.21
SF3B5-201ENST00000367569 TAC1P20366 129 aa13.77□□□□□ -0.21
SF3B5-201ENST00000367569 CASP2P42575 452 aa13.77□□□□□ -0.21
SF3B5-201ENST00000367569 RAP1GDS1P52306 607 aa13.77□□□□□ -0.21
SF3B5-201ENST00000367569 SKP1P63208 163 aa13.77□□□□□ -0.21
SF3B5-201ENST00000367569 ID2Q02363 134 aa13.77□□□□□ -0.21
SF3B5-201ENST00000367569 NSDHLQ15738 373 aa13.77□□□□□ -0.21
SF3B5-201ENST00000367569 UNC50Q53HI1 259 aa13.77□□□□□ -0.21
SF3B5-201ENST00000367569 DOPEY1Q5JWR5 2465 aa13.77□□□□□ -0.21
SF3B5-201ENST00000367569 IRAK1BP1Q5VVH5 260 aa13.77□□□□□ -0.21
SF3B5-201ENST00000367569 KHDRBS2Q5VWX1 349 aaKnown RBP13.77□□□□□ -0.21
SF3B5-201ENST00000367569 FCRLBQ6BAA4 426 aa13.77□□□□□ -0.21
SF3B5-201ENST00000367569 TTC19Q6DKK2 380 aaPredicted RBP13.77□□□□□ -0.21
SF3B5-201ENST00000367569 LETMD1Q6P1Q0 360 aa13.77□□□□□ -0.21
SF3B5-201ENST00000367569 EMBQ6PCB8 327 aa13.77□□□□□ -0.21
SF3B5-201ENST00000367569 PAPD4Q6PIY7 484 aaKnown RBP13.77□□□□□ -0.21
SF3B5-201ENST00000367569 NDUFAF7Q7L592 441 aa13.77□□□□□ -0.21
SF3B5-201ENST00000367569 CPEB2Q7Z5Q1 589 aaKnown RBP13.77□□□□□ -0.21
SF3B5-201ENST00000367569 CCDC63Q8NA47 563 aa13.77□□□□□ -0.21
SF3B5-201ENST00000367569 ACMSDQ8TDX5 336 aa13.77□□□□□ -0.21
SF3B5-201ENST00000367569 SSC4DQ8WTU2 575 aa13.77□□□□□ -0.21
SF3B5-201ENST00000367569 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.77□□□□□ -0.21
SF3B5-201ENST00000367569 CAVIN3Q969G5 261 aa13.77□□□□□ -0.21
SF3B5-201ENST00000367569 UBE2E3Q969T4 207 aa13.77□□□□□ -0.21
SF3B5-201ENST00000367569 SNRNP40Q96DI7 357 aaKnown RBP13.77□□□□□ -0.21
SF3B5-201ENST00000367569 PTCHD1Q96NR3 888 aa13.77□□□□□ -0.21
SF3B5-201ENST00000367569 OR1F2PQ96R84 312 aa13.77□□□□□ -0.21
SF3B5-201ENST00000367569 MAPKAP1Q9BPZ7 522 aa13.77□□□□□ -0.21
SF3B5-201ENST00000367569 WDR77Q9BQA1 342 aaPredicted RBP13.77□□□□□ -0.21
SF3B5-201ENST00000367569 PITHD1Q9GZP4 211 aaPredicted RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms