RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 FAM118AQ9NWS6 357 aa7.03□□□□□ -1.28
CLCN3-202ENST00000360642 SPG21Q9NZD8 308 aa7.03□□□□□ -1.28
CLCN3-202ENST00000360642 LEFTY2O00292 366 aa7.03□□□□□ -1.28
CLCN3-202ENST00000360642 SLC16A5O15375 505 aa7.03□□□□□ -1.28
CLCN3-202ENST00000360642 B4GAT1O43505 415 aa7.03□□□□□ -1.28
CLCN3-202ENST00000360642 OR56A5P0C7T3 313 aa7.03□□□□□ -1.28
CLCN3-202ENST00000360642 CRHBPP24387 322 aa7.03□□□□□ -1.28
CLCN3-202ENST00000360642 FNTBP49356 437 aa7.03□□□□□ -1.28
CLCN3-202ENST00000360642 CD83Q01151 205 aa7.03□□□□□ -1.28
CLCN3-202ENST00000360642 DEFB115Q30KQ5 88 aa7.03□□□□□ -1.28
CLCN3-202ENST00000360642 XAF1Q6GPH4 301 aa7.03□□□□□ -1.28
CLCN3-202ENST00000360642 GCNT7Q6ZNI0 430 aa7.03□□□□□ -1.28
CLCN3-202ENST00000360642 C22orf34Q6ZV56 151 aa7.03□□□□□ -1.28
CLCN3-202ENST00000360642 ZNF551Q7Z340 670 aaPredicted RBP7.03□□□□□ -1.28
CLCN3-202ENST00000360642 THAP5Q7Z6K1 395 aa7.03□□□□□ -1.28
CLCN3-202ENST00000360642 GPR65Q8IYL9 337 aa7.03□□□□□ -1.28
CLCN3-202ENST00000360642 CLEC4FQ8N1N0 589 aa7.03□□□□□ -1.28
CLCN3-202ENST00000360642 TERB1Q8NA31 727 aa7.03□□□□□ -1.28
CLCN3-202ENST00000360642 SELENOMQ8WWX9 145 aa7.03□□□□□ -1.28
CLCN3-202ENST00000360642 POP5Q969H6 163 aaKnown RBP7.03□□□□□ -1.28
CLCN3-202ENST00000360642 ASIC4Q96FT7 647 aa7.03□□□□□ -1.28
CLCN3-202ENST00000360642 CMTM7Q96FZ5 175 aa7.03□□□□□ -1.28
CLCN3-202ENST00000360642 RAX2Q96IS3 184 aa7.03□□□□□ -1.28
CLCN3-202ENST00000360642 P2RY13Q9BPV8 354 aa7.03□□□□□ -1.28
CLCN3-202ENST00000360642 INPP5KQ9BT40 448 aa7.03□□□□□ -1.28
CLCN3-202ENST00000360642 TBCDQ9BTW9 1192 aa7.03□□□□□ -1.28
CLCN3-202ENST00000360642 AMBRA1Q9C0C7 1298 aa7.03□□□□□ -1.28
CLCN3-202ENST00000360642 ABCG8Q9H221 673 aa7.03□□□□□ -1.28
CLCN3-202ENST00000360642 SMURF2Q9HAU4 748 aa7.03□□□□□ -1.28
CLCN3-202ENST00000360642 HPS4Q9NQG7 708 aa7.03□□□□□ -1.28
CLCN3-202ENST00000360642 SNX6Q9UNH7 406 aa7.03□□□□□ -1.28
CLCN3-202ENST00000360642 TMED5Q9Y3A6 229 aa7.03□□□□□ -1.28
CLCN3-202ENST00000360642 XIRP2A4UGR9 3374 aa7.03□□□□□ -1.28
CLCN3-202ENST00000360642 ASNA1O43681 348 aa7.03□□□□□ -1.28
CLCN3-202ENST00000360642 SEC14L2O76054 403 aa7.03□□□□□ -1.28
CLCN3-202ENST00000360642 ATP1B2P14415 290 aaPredicted RBP7.03□□□□□ -1.28
CLCN3-202ENST00000360642 HOXB6P17509 224 aaKnown RBP7.03□□□□□ -1.28
CLCN3-202ENST00000360642 SDC1P18827 310 aa7.03□□□□□ -1.28
CLCN3-202ENST00000360642 PRMT2P55345 433 aa7.03□□□□□ -1.28
CLCN3-202ENST00000360642 ZP2Q05996 745 aa7.03□□□□□ -1.28
CLCN3-202ENST00000360642 EPS8Q12929 822 aa7.03□□□□□ -1.28
CLCN3-202ENST00000360642 SP140Q13342 867 aa7.03□□□□□ -1.28
CLCN3-202ENST00000360642 CARD16Q5EG05 197 aa7.03□□□□□ -1.28
CLCN3-202ENST00000360642 RBM48Q5RL73 367 aaKnown RBP7.03□□□□□ -1.28
CLCN3-202ENST00000360642 TTC23Q5W5X9 447 aa7.03□□□□□ -1.28
CLCN3-202ENST00000360642 SLC39A5Q6ZMH5 540 aa7.03□□□□□ -1.28
CLCN3-202ENST00000360642 DPY19L3Q6ZPD9 716 aa7.03□□□□□ -1.28
CLCN3-202ENST00000360642 DET1Q7L5Y6 550 aa7.03□□□□□ -1.28
CLCN3-202ENST00000360642 TMEM179BQ7Z7N9 219 aa7.03□□□□□ -1.28
CLCN3-202ENST00000360642 HS3ST5Q8IZT8 346 aa7.03□□□□□ -1.28
CLCN3-202ENST00000360642 FAM9CQ8IZT9 166 aa7.03□□□□□ -1.28
CLCN3-202ENST00000360642 CMTM8Q8IZV2 173 aa7.03□□□□□ -1.28
CLCN3-202ENST00000360642 HDAC2Q92769 488 aaKnown RBP7.03□□□□□ -1.28
CLCN3-202ENST00000360642 GFM2Q969S9 779 aaKnown RBP7.03□□□□□ -1.28
CLCN3-202ENST00000360642 FAM162AQ96A26 154 aa7.03□□□□□ -1.28
CLCN3-202ENST00000360642 REXO5Q96IC2 774 aaKnown RBP7.03□□□□□ -1.28
CLCN3-202ENST00000360642 ITCHQ96J02 903 aa7.03□□□□□ -1.28
CLCN3-202ENST00000360642 RBM4BQ9BQ04 359 aaKnown RBP7.03□□□□□ -1.28
CLCN3-202ENST00000360642 RBM4Q9BWF3 364 aaKnown RBP7.03□□□□□ -1.28
CLCN3-202ENST00000360642 SLC46A2Q9BY10 475 aa7.03□□□□□ -1.28
CLCN3-202ENST00000360642 BRD9Q9H8M2 597 aa7.03□□□□□ -1.28
CLCN3-202ENST00000360642 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.03□□□□□ -1.28
CLCN3-202ENST00000360642 CIDEBQ9UHD4 219 aa7.03□□□□□ -1.28
CLCN3-202ENST00000360642 TRAV19A0A0A6YYK7 116 aa7.02□□□□□ -1.29
CLCN3-202ENST00000360642 TMX2-CTNND1H3BSU7 103 aa7.02□□□□□ -1.29
CLCN3-202ENST00000360642 SGTAO43765 313 aa7.02□□□□□ -1.29
CLCN3-202ENST00000360642 POP4O95707 220 aaKnown RBP7.02□□□□□ -1.29
CLCN3-202ENST00000360642 TGFB1P01137 390 aa7.02□□□□□ -1.29
CLCN3-202ENST00000360642 AMD1P17707 334 aa7.02□□□□□ -1.29
CLCN3-202ENST00000360642 LAG3P18627 525 aa7.02□□□□□ -1.29
CLCN3-202ENST00000360642 SDHAP31040 664 aa7.02□□□□□ -1.29
CLCN3-202ENST00000360642 S100A3P33764 101 aa7.02□□□□□ -1.29
CLCN3-202ENST00000360642 PIGAP37287 484 aa7.02□□□□□ -1.29
CLCN3-202ENST00000360642 DCTP40126 519 aa7.02□□□□□ -1.29
CLCN3-202ENST00000360642 CDKN2CP42773 168 aa7.02□□□□□ -1.29
CLCN3-202ENST00000360642 MAGEA2P43356 314 aa7.02□□□□□ -1.29
CLCN3-202ENST00000360642 HSPA14Q0VDF9 509 aa7.02□□□□□ -1.29
CLCN3-202ENST00000360642 MTAPQ13126 283 aa7.02□□□□□ -1.29
CLCN3-202ENST00000360642 PTCHD3Q3KNS1 767 aa7.02□□□□□ -1.29
CLCN3-202ENST00000360642 FLYWCH1Q4VC44 716 aa7.02□□□□□ -1.29
CLCN3-202ENST00000360642 LRRC23Q53EV4 343 aaPredicted RBP7.02□□□□□ -1.29
CLCN3-202ENST00000360642 SLC44A4Q53GD3 710 aa7.02□□□□□ -1.29
CLCN3-202ENST00000360642 PLEKHS1Q5SXH7 462 aa7.02□□□□□ -1.29
CLCN3-202ENST00000360642 GPR107Q5VW38 600 aa7.02□□□□□ -1.29
CLCN3-202ENST00000360642 LAIR2Q6ISS4 152 aa7.02□□□□□ -1.29
CLCN3-202ENST00000360642 MSANTD1Q6ZTZ1 278 aa7.02□□□□□ -1.29
CLCN3-202ENST00000360642 NEK10Q6ZWH5 1172 aa7.02□□□□□ -1.29
CLCN3-202ENST00000360642 TMEM132CQ8N3T6 1108 aa7.02□□□□□ -1.29
CLCN3-202ENST00000360642 ZCCHC7Q8N3Z6 543 aaKnown RBP7.02□□□□□ -1.29
CLCN3-202ENST00000360642 B4GALNT2Q8NHY0 566 aa7.02□□□□□ -1.29
CLCN3-202ENST00000360642 TOX2Q96NM4 488 aa7.02□□□□□ -1.29
CLCN3-202ENST00000360642 HEPHQ9BQS7 1158 aa7.02□□□□□ -1.29
CLCN3-202ENST00000360642 ELOVL6Q9H5J4 265 aa7.02□□□□□ -1.29
CLCN3-202ENST00000360642 RMND5AQ9H871 391 aa7.02□□□□□ -1.29
CLCN3-202ENST00000360642 TMEM9Q9P0T7 183 aa7.02□□□□□ -1.29
CLCN3-202ENST00000360642 LTBP2Q14767 1821 aa7.02□□□□□ -1.29
CLCN3-202ENST00000360642 RANBP2P49792 3224 aaKnown RBP7.02□□□□□ -1.29
CLCN3-202ENST00000360642 C16orf96A6NNT2 1141 aa7.02□□□□□ -1.29
CLCN3-202ENST00000360642 PER2O15055 1255 aa7.02□□□□□ -1.29
CLCN3-202ENST00000360642 NOBOXO60393 691 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms