RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 SLC35A5Q9BS91 424 aa17.75■□□□□ 0.43
HOXA9-201ENST00000343483 NPLQ9BXD5 320 aaPredicted RBP17.75■□□□□ 0.43
HOXA9-201ENST00000343483 SLC6A16Q9GZN6 736 aa17.75■□□□□ 0.43
HOXA9-201ENST00000343483 TMEM168Q9H0V1 697 aa17.75■□□□□ 0.43
HOXA9-201ENST00000343483 SPHK1Q9NYA1 384 aa17.75■□□□□ 0.43
HOXA9-201ENST00000343483 EBF1Q9UH73 591 aa17.75■□□□□ 0.43
HOXA9-201ENST00000343483 CAPN5O15484 640 aaPredicted RBP17.74■□□□□ 0.43
HOXA9-201ENST00000343483 E2F6O75461 281 aa17.74■□□□□ 0.43
HOXA9-201ENST00000343483 APBB3O95704 486 aa17.74■□□□□ 0.43
HOXA9-201ENST00000343483 STATHP02808 62 aa17.74■□□□□ 0.43
HOXA9-201ENST00000343483 GLULP15104 373 aa17.74■□□□□ 0.43
HOXA9-201ENST00000343483 HOXB6P17509 224 aaKnown RBP17.74■□□□□ 0.43
HOXA9-201ENST00000343483 SHMT2P34897 504 aa17.74■□□□□ 0.43
HOXA9-201ENST00000343483 CRATP43155 626 aa17.74■□□□□ 0.43
HOXA9-201ENST00000343483 YAP1P46937 504 aaKnown RBP17.74■□□□□ 0.43
HOXA9-201ENST00000343483 ALDH9A1P49189 494 aa17.74■□□□□ 0.43
HOXA9-201ENST00000343483 MYBPC3Q14896 1274 aa17.74■□□□□ 0.43
HOXA9-201ENST00000343483 TJAP1Q5JTD0 557 aa17.74■□□□□ 0.43
HOXA9-201ENST00000343483 ZNF852Q6ZMS4 543 aa17.74■□□□□ 0.43
HOXA9-201ENST00000343483 TMEM145Q8NBT3 493 aa17.74■□□□□ 0.43
HOXA9-201ENST00000343483 OR5K1Q8NHB7 308 aa17.74■□□□□ 0.43
HOXA9-201ENST00000343483 MAL2Q969L2 176 aa17.74■□□□□ 0.43
HOXA9-201ENST00000343483 RBM4BQ9BQ04 359 aaKnown RBP17.74■□□□□ 0.43
HOXA9-201ENST00000343483 RBM4Q9BWF3 364 aaKnown RBP17.74■□□□□ 0.43
HOXA9-201ENST00000343483 ING2Q9H160 280 aa17.74■□□□□ 0.43
HOXA9-201ENST00000343483 USE1Q9NZ43 259 aa17.74■□□□□ 0.43
HOXA9-201ENST00000343483 TAAR2Q9P1P5 351 aa17.74■□□□□ 0.43
HOXA9-201ENST00000343483 ACSL6Q9UKU0 697 aa17.74■□□□□ 0.43
HOXA9-201ENST00000343483 PNMA8BQ9ULN7 279 aaPredicted RBP17.74■□□□□ 0.43
HOXA9-201ENST00000343483 TRBV23OR9-2A0A075B6M9 112 aa17.73■□□□□ 0.43
HOXA9-201ENST00000343483 A0A1W2PRB8 838 aa17.73■□□□□ 0.43
HOXA9-201ENST00000343483 KDM1AO60341 852 aa17.73■□□□□ 0.43
HOXA9-201ENST00000343483 ELK4P28324 431 aa17.73■□□□□ 0.43
HOXA9-201ENST00000343483 GRK3P35626 688 aa17.73■□□□□ 0.43
HOXA9-201ENST00000343483 PLA2G16P53816 162 aa17.73■□□□□ 0.43
HOXA9-201ENST00000343483 PPP2R2BQ00005 443 aa17.73■□□□□ 0.43
HOXA9-201ENST00000343483 EPS8Q12929 822 aa17.73■□□□□ 0.43
HOXA9-201ENST00000343483 PPP1R8Q12972 351 aaKnown RBP17.73■□□□□ 0.43
HOXA9-201ENST00000343483 SPIDRQ14159 915 aa17.73■□□□□ 0.43
HOXA9-201ENST00000343483 NUDT13Q86X67 352 aa17.73■□□□□ 0.43
HOXA9-201ENST00000343483 CLVS1Q8IUQ0 354 aaPredicted RBP17.73■□□□□ 0.43
HOXA9-201ENST00000343483 NAGSQ8N159 534 aa17.73■□□□□ 0.43
HOXA9-201ENST00000343483 SYNPOQ8N3V7 929 aa17.73■□□□□ 0.43
HOXA9-201ENST00000343483 FBXL6Q8N531 539 aa17.73■□□□□ 0.43
HOXA9-201ENST00000343483 OR2L3Q8NG85 312 aa17.73■□□□□ 0.43
HOXA9-201ENST00000343483 OR4E2Q8NGC2 313 aa17.73■□□□□ 0.43
HOXA9-201ENST00000343483 OR5AK3PQ8NH89 298 aa17.73■□□□□ 0.43
HOXA9-201ENST00000343483 GOT1L1Q8NHS2 421 aaPredicted RBP17.73■□□□□ 0.43
HOXA9-201ENST00000343483 LCN9Q8WX39 176 aa17.73■□□□□ 0.43
HOXA9-201ENST00000343483 RGMAQ96B86 450 aa17.73■□□□□ 0.43
HOXA9-201ENST00000343483 QRFPRQ96P65 431 aa17.73■□□□□ 0.43
HOXA9-201ENST00000343483 CHST8Q9H2A9 424 aa17.73■□□□□ 0.43
HOXA9-201ENST00000343483 KIR3DX1Q9H7L2 352 aa17.73■□□□□ 0.43
HOXA9-201ENST00000343483 SLC6A20Q9NP91 592 aa17.73■□□□□ 0.43
HOXA9-201ENST00000343483 LHX9Q9NQ69 397 aa17.73■□□□□ 0.43
HOXA9-201ENST00000343483 IFT80Q9P2H3 777 aaPredicted RBP17.73■□□□□ 0.43
HOXA9-201ENST00000343483 RAPGEFL1Q9UHV5 662 aa17.73■□□□□ 0.43
HOXA9-201ENST00000343483 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.73■□□□□ 0.43
HOXA9-201ENST00000343483 MYO10Q9HD67 2058 aa17.73■□□□□ 0.43
HOXA9-201ENST00000343483 A0A0G2JN53 185 aa17.73■□□□□ 0.43
HOXA9-201ENST00000343483 AXIN1O15169 862 aa17.73■□□□□ 0.43
HOXA9-201ENST00000343483 HOXB3P14651 431 aaPredicted RBP17.73■□□□□ 0.43
HOXA9-201ENST00000343483 DDCP20711 480 aa17.73■□□□□ 0.43
HOXA9-201ENST00000343483 PEBP1P30086 187 aaKnown RBP17.73■□□□□ 0.43
HOXA9-201ENST00000343483 KDELR2P33947 212 aa17.73■□□□□ 0.43
HOXA9-201ENST00000343483 SOAT1P35610 550 aa17.73■□□□□ 0.43
HOXA9-201ENST00000343483 DCTP40126 519 aa17.73■□□□□ 0.43
HOXA9-201ENST00000343483 BCL6P41182 706 aa17.73■□□□□ 0.43
HOXA9-201ENST00000343483 HLCSP50747 726 aa17.73■□□□□ 0.43
HOXA9-201ENST00000343483 LRRC32Q14392 662 aa17.73■□□□□ 0.43
HOXA9-201ENST00000343483 TTC23Q5W5X9 447 aa17.73■□□□□ 0.43
HOXA9-201ENST00000343483 TMEM179BQ7Z7N9 219 aa17.73■□□□□ 0.43
HOXA9-201ENST00000343483 ZNF555Q8NEP9 628 aa17.73■□□□□ 0.43
HOXA9-201ENST00000343483 MBOAT4Q96T53 435 aa17.73■□□□□ 0.43
HOXA9-201ENST00000343483 DPH7Q9BTV6 452 aa17.73■□□□□ 0.43
HOXA9-201ENST00000343483 SPATA9Q9BWV2 254 aa17.73■□□□□ 0.43
HOXA9-201ENST00000343483 FAM118AQ9NWS6 357 aa17.73■□□□□ 0.43
HOXA9-201ENST00000343483 TAS2R9Q9NYW1 312 aa17.73■□□□□ 0.43
HOXA9-201ENST00000343483 FAF1Q9UNN5 650 aaPredicted RBP17.73■□□□□ 0.43
HOXA9-201ENST00000343483 TRBC2A0A5B9 178 aa17.72■□□□□ 0.43
HOXA9-201ENST00000343483 ISM1B1AKI9 464 aa17.72■□□□□ 0.43
HOXA9-201ENST00000343483 HAT1O14929 419 aa17.72■□□□□ 0.43
HOXA9-201ENST00000343483 AQP1P29972 269 aa17.72■□□□□ 0.43
HOXA9-201ENST00000343483 CHI3L1P36222 383 aaPredicted RBP17.72■□□□□ 0.43
HOXA9-201ENST00000343483 SRP54P61011 504 aaKnown RBP17.72■□□□□ 0.43
HOXA9-201ENST00000343483 COX20Q5RI15 118 aa17.72■□□□□ 0.43
HOXA9-201ENST00000343483 ANKRD34AQ69YU3 496 aa17.72■□□□□ 0.43
HOXA9-201ENST00000343483 Q6ZSR6 202 aa17.72■□□□□ 0.43
HOXA9-201ENST00000343483 THAP5Q7Z6K1 395 aa17.72■□□□□ 0.43
HOXA9-201ENST00000343483 AMIGO1Q86WK6 493 aa17.72■□□□□ 0.43
HOXA9-201ENST00000343483 C8orf59Q8N0T1 100 aaPredicted RBP17.72■□□□□ 0.43
HOXA9-201ENST00000343483 PJA1Q8NG27 643 aa17.72■□□□□ 0.43
HOXA9-201ENST00000343483 CREB3L4Q8TEY5 395 aa17.72■□□□□ 0.43
HOXA9-201ENST00000343483 TM4SF18Q96CE8 201 aa17.72■□□□□ 0.43
HOXA9-201ENST00000343483 MACROD1Q9BQ69 325 aa17.72■□□□□ 0.43
HOXA9-201ENST00000343483 C17orf62Q9BQA9 187 aa17.72■□□□□ 0.43
HOXA9-201ENST00000343483 ABCG4Q9H172 646 aa17.72■□□□□ 0.43
HOXA9-201ENST00000343483 C6orf106Q9H6K1 298 aaPredicted RBP17.72■□□□□ 0.43
HOXA9-201ENST00000343483 LIN28AQ9H9Z2 209 aaKnown RBP17.72■□□□□ 0.43
HOXA9-201ENST00000343483 RPS6KA6Q9UK32 745 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms